RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 NDUFB8O95169 186 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 HBZP02008 142 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 GIPP09681 153 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-210ENST00000522843 AADACP22760 399 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 CEACAM6P40199 344 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 NANOS2P60321 138 aaKnown RBP4.87□□□□□ -1.63
SDCBP-210ENST00000522843 IL15RAQ13261 267 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 PPP1R1AQ13522 171 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 EIF4EBP1Q13541 118 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-210ENST00000522843 CT45A1Q5HYN5 189 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 SLC25A48Q6ZT89 311 aaKnown RBP4.87□□□□□ -1.63
SDCBP-210ENST00000522843 ZNF645Q8N7E2 425 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 TCTEX1D1Q8N7M0 179 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 ADAD2Q8NCV1 583 aaKnown RBP4.87□□□□□ -1.63
SDCBP-210ENST00000522843 NPBQ8NG41 125 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 OR2AK2Q8NG84 335 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 OR11H7Q8NGC8 314 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 OR10V1Q8NGI7 309 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 OR2K2Q8NGT1 345 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 CT45A3Q8NHU0 189 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 TMEM56Q96MV1 263 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 PHB2Q99623 299 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 SEC22CQ9BRL7 303 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 PARP12Q9H0J9 701 aaKnown RBP4.87□□□□□ -1.63
SDCBP-210ENST00000522843 ZC4H2Q9NQZ6 224 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 JPT1Q9UK76 154 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 C14orf166Q9Y224 244 aaKnown RBP4.87□□□□□ -1.63
SDCBP-210ENST00000522843 SELENOKQ9Y6D0 94 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 TMEM56-RWDD3S4R434 201 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 LOC102724200A0A096LPH7 203 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-210ENST00000522843 TEX13DA0A0J9YY54 714 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-210ENST00000522843 PGLYRP1O75594 196 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-210ENST00000522843 CDS2O95674 445 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 MBPP02686 304 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-210ENST00000522843 C1QBP02746 253 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 TRGV3P03979 118 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 CTRB1P17538 263 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 CXCL3P19876 107 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 NFYAP23511 347 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-210ENST00000522843 BMI1P35226 326 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 KIR2DS2P43631 304 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 PIGPP57054 158 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 HERV-K104P61576 105 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 CYCSP99999 105 aaKnown RBP4.86□□□□□ -1.63
SDCBP-210ENST00000522843 TMEM187Q14656 261 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 DEFB135Q30KP9 77 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 DEFB114Q30KQ6 69 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 MORN2Q502X0 79 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 CTRB2Q6GPI1 263 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 ODF3L1Q8IXM7 274 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 CMTM1Q8IZ96 169 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 CCDC71LQ8N9Z2 235 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 LFNGQ8NES3 379 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 OR1L1Q8NH94 360 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 GLYATL2Q8WU03 294 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 IL22RA2Q969J5 263 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 ARL11Q969Q4 196 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 HYLS1Q96M11 299 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 TM2D2Q9BX73 214 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 ZNF436Q9C0F3 470 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-210ENST00000522843 CTDSP1Q9GZU7 261 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 FXYD6Q9H0Q3 95 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 FBXL15Q9H469 300 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 NAA60Q9H7X0 242 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 SLC2A9Q9NRM0 540 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 RDH8Q9NYR8 311 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 TP53TG1Q9Y2A0 90 aa4.86□□□□□ -1.63
SDCBP-210ENST00000522843 IGKV1D-13A0A0B4J2D9 117 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 DUXBA0A1W2PPF3 345 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 HMSDA8MTL9 139 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 G3V3Q6 166 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 RRHO14718 337 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 BET1O15155 118 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 TXNL1O43396 289 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 SSNA1O43805 119 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 HLA-AP01891 365 aaKnown RBP4.85□□□□□ -1.63
SDCBP-210ENST00000522843 IGKV1-13P0DP09 117 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 SLC25A6P12236 298 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 ANXA3P12429 323 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 PGAM2P15259 253 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 RPA2P15927 270 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 AKR1C4P17516 323 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 F2RP25116 425 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 UCP1P25874 307 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 IL3RAP26951 378 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 H2BFSP57053 126 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 SRPXP78539 464 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 CD300CQ08708 224 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 CBX3Q13185 183 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 ANXA2RQ3ZCQ2 193 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 AKIRIN2Q53H80 203 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 UNQ5815/PRO19632Q6UWF5 114 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 ZNF818PQ6ZRF7 136 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 C5orf24Q7Z6I8 188 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 TMED4Q7Z7H5 227 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 PPP1R27Q86WC6 154 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-210ENST00000522843 OR52B4Q8NGK2 314 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 COQ8AQ8NI60 647 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 RNF183Q96D59 192 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms