RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 DPM3Q9P2X0 92 aa9.18□□□□□ -0.94
CLK4-206ENST00000520878 A0A087WWC5 75 aa9.18□□□□□ -0.94
CLK4-206ENST00000520878 IGHV3-35A0A0C4DH35 117 aa9.18□□□□□ -0.94
CLK4-206ENST00000520878 C22orf46C9J442 243 aa9.18□□□□□ -0.94
CLK4-206ENST00000520878 BUB1B-PAK6H3BSN5 160 aa9.18□□□□□ -0.94
CLK4-206ENST00000520878 TMEM167AQ8TBQ9 72 aa9.18□□□□□ -0.94
CLK4-206ENST00000520878 GPR61Q9BZJ8 451 aa9.18□□□□□ -0.94
CLK4-206ENST00000520878 GAR1Q9NY12 217 aaKnown RBP9.18□□□□□ -0.94
CLK4-206ENST00000520878 KALRNO60229 2985 aa9.18□□□□□ -0.94
CLK4-206ENST00000520878 CENPEQ02224 2701 aa9.18□□□□□ -0.94
CLK4-206ENST00000520878 FCN1O00602 326 aa9.18□□□□□ -0.94
CLK4-206ENST00000520878 FCN3O75636 299 aa9.18□□□□□ -0.94
CLK4-206ENST00000520878 FXYD3Q14802 87 aa9.18□□□□□ -0.94
CLK4-206ENST00000520878 C2orf83Q53S99 150 aa9.18□□□□□ -0.94
CLK4-206ENST00000520878 PAXXQ9BUH6 204 aa9.18□□□□□ -0.94
CLK4-206ENST00000520878 TRAV34A0A0B4J273 112 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 CXorf65A6NEN9 183 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 SLC25A5P05141 298 aaKnown RBP9.17□□□□□ -0.94
CLK4-206ENST00000520878 UBE2G1P62253 170 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 SSBP2P81877 361 aaPredicted RBP9.17□□□□□ -0.94
CLK4-206ENST00000520878 ETFRF1Q6IPR1 90 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 CENPVQ7Z7K6 275 aaPredicted RBP9.17□□□□□ -0.94
CLK4-206ENST00000520878 NDUFA4L2Q9NRX3 87 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 LRRK2Q5S007 2527 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 OCC1Q8TAD7 63 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 SRSF12Q8WXF0 261 aaKnown RBP9.17□□□□□ -0.94
CLK4-206ENST00000520878 KAAG1Q9UBP8 84 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 POLQO75417 2590 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 SFTPCP11686 197 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 AGAP20933 346 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 PRSS8Q16651 343 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 VWC2Q2TAL6 325 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 LINC00305Q7Z4B0 112 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 OR1L4Q8NGR5 311 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 ANAPC16Q96DE5 110 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 TRAPPC1Q9Y5R8 145 aa9.17□□□□□ -0.94
CLK4-206ENST00000520878 IGKV1OR2-108A0A075B7D4 117 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 ZNF705GA8MUZ8 300 aaPredicted RBP9.16□□□□□ -0.94
CLK4-206ENST00000520878 GFI1BQ5VTD9 330 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 PFDN5Q99471 154 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 IGHV3OR16-8A0A075B7F1 116 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 XKRY2A2RUG3 117 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 IGHV3-23P01764 117 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 NPPCP23582 126 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 POU2AF1Q16633 256 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 ZNF114Q8NC26 417 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 TMUB1Q9BVT8 246 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 FNDC4Q9H6D8 234 aaPredicted RBP9.16□□□□□ -0.94
CLK4-206ENST00000520878 Q56UQ5 140 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 RASL11BQ9BPW5 248 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 TCEAL7Q9BRU2 100 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 SIGLEC9Q9Y336 463 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 DOPEY2Q9Y3R5 2298 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 COL12A1Q99715 3063 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 EPG5Q9HCE0 2579 aa9.16□□□□□ -0.94
CLK4-206ENST00000520878 HIST1H2BKO60814 126 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 S100A8P05109 93 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 HIST1H2BJP06899 126 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 HIST1H2BOP23527 126 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 HIST1H2BBP33778 126 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 CNN1P51911 297 aaKnown RBP9.15□□□□□ -0.94
CLK4-206ENST00000520878 HIST1H2BDP58876 126 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 HIST1H2BCP62807 126 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 HIST2H2BEQ16778 126 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.15□□□□□ -0.94
CLK4-206ENST00000520878 ASPHD1Q5U4P2 390 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 CMTM2Q8TAZ6 248 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 NEU4Q8WWR8 484 aaPredicted RBP9.15□□□□□ -0.94
CLK4-206ENST00000520878 CACNG8Q8WXS5 425 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 HIST1H2BHQ93079 126 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 HIST1H2BNQ99877 126 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 HIST1H2BMQ99879 126 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 WNT10AQ9GZT5 417 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 SEC14L6B5MCN3 397 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 RPL19P84098 196 aaKnown RBP9.15□□□□□ -0.94
CLK4-206ENST00000520878 CENPWQ5EE01 88 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 LINC01551Q86U37 167 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 SFRP2Q96HF1 295 aa9.15□□□□□ -0.94
CLK4-206ENST00000520878 LSM4Q9Y4Z0 139 aaKnown RBP9.15□□□□□ -0.94
CLK4-206ENST00000520878 SMG1Q96Q15 3661 aaKnown RBP9.15□□□□□ -0.94
CLK4-206ENST00000520878 HYPMO75409 117 aa9.15□□□□□ -0.95
CLK4-206ENST00000520878 OR51M1Q9H341 326 aa9.15□□□□□ -0.95
CLK4-206ENST00000520878 GNB4Q9HAV0 340 aa9.15□□□□□ -0.95
CLK4-206ENST00000520878 PGPA6NDG6 321 aa9.14□□□□□ -0.95
CLK4-206ENST00000520878 C5orf52A6NGY3 159 aa9.14□□□□□ -0.95
CLK4-206ENST00000520878 IGHV2-70P01814 119 aa9.14□□□□□ -0.95
CLK4-206ENST00000520878 C1QL4Q86Z23 238 aa9.14□□□□□ -0.95
CLK4-206ENST00000520878 LINC00479Q96M42 142 aa9.14□□□□□ -0.95
CLK4-206ENST00000520878 CHODLQ9H9P2 273 aa9.14□□□□□ -0.95
CLK4-206ENST00000520878 TET2Q6N021 2002 aaPredicted RBP9.14□□□□□ -0.95
CLK4-206ENST00000520878 GNG7O60262 68 aa9.14□□□□□ -0.95
CLK4-206ENST00000520878 FOLR2P14207 255 aa9.14□□□□□ -0.95
CLK4-206ENST00000520878 ECSCRQ19T08 205 aa9.14□□□□□ -0.95
CLK4-206ENST00000520878 MRPL54Q6P161 138 aaKnown RBP9.14□□□□□ -0.95
CLK4-206ENST00000520878 PTPN13Q12923 2485 aa9.14□□□□□ -0.95
CLK4-206ENST00000520878 IER3P46695 156 aa9.14□□□□□ -0.95
CLK4-206ENST00000520878 SELENOTP62341 195 aa9.14□□□□□ -0.95
CLK4-206ENST00000520878 BAGE2Q86Y30 109 aa9.14□□□□□ -0.95
CLK4-206ENST00000520878 TEX45Q8NA69 505 aa9.14□□□□□ -0.95
CLK4-206ENST00000520878 RNASEH2CQ8TDP1 164 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms