RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 IGHV1OR15-9A0A0B4J2B8 117 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 SERTM2A0A1B0GWG4 89 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 A0A1B0GX78 115 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 WI2-2373I1.2A0A1W2PRP0 233 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 MAP1LC3B2A6NCE7 125 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 H0YJW9 148 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM250H0YL14 139 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 K7ERU9 68 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 RBFOX2O43251 390 aaKnown RBP eCLIP2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 EFNA2O43921 213 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 TTRP02766 147 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGF1P05019 195 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 GPX1P07203 203 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 CRYGCP07315 174 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF823P16415 610 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF17P17021 662 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 PTNP21246 168 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 NPPCP23582 126 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 IL12BP29460 328 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 S100A7P31151 101 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 DNASE1L1P49184 302 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 CDC34P49427 236 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 RPL23P62829 140 aaKnown RBP2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 EWSR1Q01844 656 aaKnown RBP eCLIP2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 C1orf61Q13536 156 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 SLC9A3R2Q15599 337 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 MPV17LQ2QL34 196 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 IAH1Q2TAA2 248 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM249Q2WGJ8 235 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 PRAMEF20Q5VT98 475 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 TOMM20LQ6UXN7 152 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 NIT1Q86X76 327 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 CALHM1Q8IU99 346 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 KRTAP11-1Q8IUC1 163 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 SLC22A24Q8N4F4 322 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 DEFB125Q8N687 156 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR5L1Q8NGL2 311 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR2T10Q8NGZ9 312 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 APH1AQ96BI3 265 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 SLAMF6Q96DU3 332 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 SLC25A44Q96H78 314 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 OXGR1Q96P68 337 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 TXN2Q99757 166 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 VAMP8Q9BV40 100 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 SRXN1Q9BYN0 137 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 SMIM3Q9BZL3 60 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 ULBP3Q9BZM4 244 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 MAP1LC3BQ9GZQ8 125 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZDHHC11Q9H8X9 412 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM9BQ9NQ34 198 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 TAS2R4Q9NYW5 299 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 NAT8Q9UHE5 227 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF835Q9Y2P0 537 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 MYO9BQ13459 2157 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 ESPL1Q14674 2120 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 PDE4DIPQ5VU43 2346 aa2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 COL5A1P20908 1838 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P41-201ENST00000520234 CEP192Q8TEP8 1941 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGKV1D-8A0A087WSZ0 117 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 NSG1A0A0A6YYJ2 146 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 TRAV8-6A0A0B4J262 113 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 A0A1B0GWB2 263 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 LOC107986453A0A1B0GWG9 222 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 SERPINE3A8MV23 424 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 F2Z2F3 143 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 H7C1C5 153 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 CRXO43186 299 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 MPZL1O95297 269 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 BRI3O95415 125 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGHV3-48P01763 117 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGHG4P01861 327 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 HLA-DRB1P01911 266 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 HBE1P02100 147 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 H2BFMP0C1H6 154 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 SMIM17P0DL12 118 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 HIST1H1DP16402 221 aaKnown RBP2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 PTGDSP41222 190 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 GPR6P46095 362 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 GALR1P47211 349 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 HNRNPA3P51991 378 aaKnown RBP2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 PRRX1P54821 245 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 GFERP55789 205 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 CLDN6P56747 220 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 S100A10P60903 97 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 RAB11AP62491 216 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 LCN6P62502 163 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 RHOBP62745 196 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 GRB2P62993 217 aaKnown RBP2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 PSG9Q00887 426 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 PSG4Q00888 419 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 PLCXD2Q0VAA5 305 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 RSPO1Q2MKA7 263 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 DEFB110Q30KQ9 67 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 TIGITQ495A1 244 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 C10orf128Q5T292 105 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 C9orf135Q5VTT2 229 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 FOXI2Q6ZQN5 318 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 Q6ZS49 121 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 COX15Q7KZN9 410 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR5AS1Q8N127 324 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms