RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 NPBWR1P48145 328 aa16.7■□□□□ 0.26
VEGFA-217ENST00000518538 ADAMTSL5Q6ZMM2 481 aa16.7■□□□□ 0.26
VEGFA-217ENST00000518538 TMEM170AQ8WVE7 144 aa16.7■□□□□ 0.26
VEGFA-217ENST00000518538 PRR25Q96S07 402 aa16.7■□□□□ 0.26
VEGFA-217ENST00000518538 PALMDQ9NP74 551 aa16.7■□□□□ 0.26
VEGFA-217ENST00000518538 RPS10-NUDT3A0A1W2PQS6 291 aa16.69■□□□□ 0.26
VEGFA-217ENST00000518538 TMEM213A2RRL7 107 aa16.69■□□□□ 0.26
VEGFA-217ENST00000518538 NDUFA4O00483 81 aa16.69■□□□□ 0.26
VEGFA-217ENST00000518538 LY86O95711 162 aa16.69■□□□□ 0.26
VEGFA-217ENST00000518538 IFNA10P01566 189 aa16.69■□□□□ 0.26
VEGFA-217ENST00000518538 FOLR2P14207 255 aa16.69■□□□□ 0.26
VEGFA-217ENST00000518538 RELQ04864 619 aaPredicted RBP16.69■□□□□ 0.26
VEGFA-217ENST00000518538 ZNF431Q8TF32 576 aaPredicted RBP16.69■□□□□ 0.26
VEGFA-217ENST00000518538 TMEM190Q8WZ59 177 aa16.69■□□□□ 0.26
VEGFA-217ENST00000518538 UFC1Q9Y3C8 167 aa16.69■□□□□ 0.26
VEGFA-217ENST00000518538 MPTX1A8MV57 137 aa16.68■□□□□ 0.26
VEGFA-217ENST00000518538 ELLP55199 621 aaPredicted RBP16.68■□□□□ 0.26
VEGFA-217ENST00000518538 ATP5IP56385 69 aaPredicted RBP16.68■□□□□ 0.26
VEGFA-217ENST00000518538 OR2K2Q8NGT1 345 aa16.68■□□□□ 0.26
VEGFA-217ENST00000518538 DYNLRB2Q8TF09 96 aa16.68■□□□□ 0.26
VEGFA-217ENST00000518538 SEC22CQ9BRL7 303 aa16.68■□□□□ 0.26
VEGFA-217ENST00000518538 GP9P14770 177 aa16.67■□□□□ 0.26
VEGFA-217ENST00000518538 EDN2P20800 178 aa16.67■□□□□ 0.26
VEGFA-217ENST00000518538 CBLN1P23435 193 aa16.67■□□□□ 0.26
VEGFA-217ENST00000518538 DEFA1P59665 94 aa16.67■□□□□ 0.26
VEGFA-217ENST00000518538 DEFA3P59666 94 aa16.67■□□□□ 0.26
VEGFA-217ENST00000518538 MLANAQ16655 118 aa16.67■□□□□ 0.26
VEGFA-217ENST00000518538 TM4SF20Q53R12 229 aa16.67■□□□□ 0.26
VEGFA-217ENST00000518538 LCN12Q6JVE5 192 aa16.67■□□□□ 0.26
VEGFA-217ENST00000518538 OR4X1Q8NH49 305 aa16.67■□□□□ 0.26
VEGFA-217ENST00000518538 MARC2Q969Z3 335 aa16.67■□□□□ 0.26
VEGFA-217ENST00000518538 CIB3Q96Q77 187 aaPredicted RBP16.67■□□□□ 0.26
VEGFA-217ENST00000518538 MRPL36Q9P0J6 103 aaKnown RBP16.67■□□□□ 0.26
VEGFA-217ENST00000518538 SYNGR2O43760 224 aa16.66■□□□□ 0.26
VEGFA-217ENST00000518538 CLN5O75503 358 aa16.66■□□□□ 0.26
VEGFA-217ENST00000518538 IAPPP10997 89 aa16.66■□□□□ 0.26
VEGFA-217ENST00000518538 SLC25A4P12235 298 aa16.66■□□□□ 0.26
VEGFA-217ENST00000518538 DCTN2Q13561 401 aaKnown RBP16.66■□□□□ 0.26
VEGFA-217ENST00000518538 ETFRF1Q6IPR1 90 aa16.66■□□□□ 0.26
VEGFA-217ENST00000518538 NRARPQ7Z6K4 114 aa16.66■□□□□ 0.26
VEGFA-217ENST00000518538 OR4D5Q8NGN0 318 aa16.66■□□□□ 0.26
VEGFA-217ENST00000518538 CACNG8Q8WXS5 425 aa16.66■□□□□ 0.26
VEGFA-217ENST00000518538 ZNF414Q96IQ9 312 aa16.66■□□□□ 0.26
VEGFA-217ENST00000518538 MAGT1Q9H0U3 335 aa16.66■□□□□ 0.26
VEGFA-217ENST00000518538 TECRQ9NZ01 308 aaKnown RBP16.66■□□□□ 0.26
VEGFA-217ENST00000518538 TMEM50AO95807 157 aa16.65■□□□□ 0.26
VEGFA-217ENST00000518538 IL5P05113 134 aa16.65■□□□□ 0.26
VEGFA-217ENST00000518538 C8orf88P0DMB2 117 aa16.65■□□□□ 0.26
VEGFA-217ENST00000518538 ID3Q02535 119 aa16.65■□□□□ 0.26
VEGFA-217ENST00000518538 DEFB114Q30KQ6 69 aa16.65■□□□□ 0.26
VEGFA-217ENST00000518538 DAZ1Q9NQZ3 744 aaKnown RBP16.65■□□□□ 0.26
VEGFA-217ENST00000518538 C15orf62A8K5M9 175 aa16.64■□□□□ 0.25
VEGFA-217ENST00000518538 SCGB2A1O75556 95 aa16.64■□□□□ 0.25
VEGFA-217ENST00000518538 IFNA4P05014 189 aa16.64■□□□□ 0.25
VEGFA-217ENST00000518538 NKX2-1P43699 371 aaPredicted RBP16.64■□□□□ 0.25
VEGFA-217ENST00000518538 IAH1Q2TAA2 248 aaPredicted RBP16.64■□□□□ 0.25
VEGFA-217ENST00000518538 CD300EQ496F6 205 aaPredicted RBP16.64■□□□□ 0.25
VEGFA-217ENST00000518538 DEFB121Q5J5C9 76 aa16.64■□□□□ 0.25
VEGFA-217ENST00000518538 C12orf45Q8N5I9 185 aaPredicted RBP16.64■□□□□ 0.25
VEGFA-217ENST00000518538 UXS1Q8NBZ7 420 aa16.64■□□□□ 0.25
VEGFA-217ENST00000518538 OR10C1Q96KK4 312 aa16.64■□□□□ 0.25
VEGFA-217ENST00000518538 C20orf24Q9BUV8 137 aa16.64■□□□□ 0.25
VEGFA-217ENST00000518538 MRPL27Q9P0M9 148 aaKnown RBP16.64■□□□□ 0.25
VEGFA-217ENST00000518538 DNAH3Q8TD57 4116 aa16.64■□□□□ 0.25
VEGFA-217ENST00000518538 K7EMT4 169 aa16.63■□□□□ 0.25
VEGFA-217ENST00000518538 WRBO00258 174 aa16.63■□□□□ 0.25
VEGFA-217ENST00000518538 RPP30P78346 268 aaKnown RBP16.63■□□□□ 0.25
VEGFA-217ENST00000518538 CD69Q07108 199 aa16.63■□□□□ 0.25
VEGFA-217ENST00000518538 PRSS54Q6PEW0 395 aa16.63■□□□□ 0.25
VEGFA-217ENST00000518538 ZNF600Q6ZNG1 722 aa16.63■□□□□ 0.25
VEGFA-217ENST00000518538 TMEM116Q8NCL8 245 aa16.63■□□□□ 0.25
VEGFA-217ENST00000518538 LSM4Q9Y4Z0 139 aaKnown RBP16.63■□□□□ 0.25
VEGFA-217ENST00000518538 TRAV30A0A087WSZ9 112 aa16.62■□□□□ 0.25
VEGFA-217ENST00000518538 IZUMO1RA6ND01 250 aa16.62■□□□□ 0.25
VEGFA-217ENST00000518538 YIF1AO95070 293 aa16.62■□□□□ 0.25
VEGFA-217ENST00000518538 RND2P52198 227 aa16.62■□□□□ 0.25
VEGFA-217ENST00000518538 POLR2GP62487 172 aaKnown RBP eCLIP16.62■□□□□ 0.25
VEGFA-217ENST00000518538 RAB11AP62491 216 aa16.62■□□□□ 0.25
VEGFA-217ENST00000518538 SLC16A13Q7RTY0 426 aa16.62■□□□□ 0.25
VEGFA-217ENST00000518538 ZBTB8BQ8NAP8 495 aaPredicted RBP16.62■□□□□ 0.25
VEGFA-217ENST00000518538 MLXQ9UH92 298 aa16.62■□□□□ 0.25
VEGFA-217ENST00000518538 IGHV3OR16-8A0A075B7F1 116 aa16.61■□□□□ 0.25
VEGFA-217ENST00000518538 CCSO14618 274 aa16.61■□□□□ 0.25
VEGFA-217ENST00000518538 GPN1Q9HCN4 374 aaPredicted RBP16.61■□□□□ 0.25
VEGFA-217ENST00000518538 GSKIPQ9P0R6 139 aa16.61■□□□□ 0.25
VEGFA-217ENST00000518538 BTNL8Q6UX41 500 aa16.6■□□□□ 0.25
VEGFA-217ENST00000518538 OR1S2Q8NGQ3 325 aa16.6■□□□□ 0.25
VEGFA-217ENST00000518538 PUS1Q9Y606 427 aaKnown RBP eCLIP16.6■□□□□ 0.25
VEGFA-217ENST00000518538 INMT-MINDY4F8WBC2 141 aa16.59■□□□□ 0.25
VEGFA-217ENST00000518538 ZNF207O43670 478 aaKnown RBP16.59■□□□□ 0.25
VEGFA-217ENST00000518538 PRAF2O60831 178 aa16.59■□□□□ 0.25
VEGFA-217ENST00000518538 SCGB1D2O95969 90 aa16.59■□□□□ 0.25
VEGFA-217ENST00000518538 IGKV1-17P01599 117 aa16.59■□□□□ 0.25
VEGFA-217ENST00000518538 IGLC1P0CG04 106 aa16.59■□□□□ 0.25
VEGFA-217ENST00000518538 OR10J1P30954 320 aa16.59■□□□□ 0.25
VEGFA-217ENST00000518538 GPX4P36969 197 aaPredicted RBP16.59■□□□□ 0.25
VEGFA-217ENST00000518538 SPANXN5Q5MJ07 72 aa16.59■□□□□ 0.25
VEGFA-217ENST00000518538 TOMM20LQ6UXN7 152 aa16.59■□□□□ 0.25
VEGFA-217ENST00000518538 NPIPB3Q92617 1050 aa16.59■□□□□ 0.25
VEGFA-217ENST00000518538 ACY3Q96HD9 319 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms