RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 C19orf12Q9NSK7 152 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 ACER3Q9NUN7 267 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 C1orf109Q9NX04 203 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 USE1Q9NZ43 259 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 RPS6KB2Q9UBS0 482 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 ZNF391Q9UJN7 358 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 TFR2Q9UP52 801 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 SLC7A11Q9UPY5 501 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
CPNE3-204ENST00000517862 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
CPNE3-204ENST00000517862 IGHV6-1A0A0B4J1U7 121 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 A0A1W2PRG6 482 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 FAM183AA6NL82 134 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 CLDN24A6NM45 220 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 G3V318 75 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 MYL12BO14950 172 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 CCDC22O60826 627 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 SPAG7O75391 227 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 ATP6V1G2O95670 118 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 MT-ND4P03905 459 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 TFF1P04155 84 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 OCMP0CE72 109 aaPredicted RBP1.94□□□□□ -2.1
CPNE3-204ENST00000517862 LIMS3P0CW19 117 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 LIMS4P0CW20 117 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 MUC1P15941 1255 aaPredicted RBP1.94□□□□□ -2.1
CPNE3-204ENST00000517862 GRPRP30550 384 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 CAV3P56539 151 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 GRB2P62993 217 aaKnown RBP1.94□□□□□ -2.1
CPNE3-204ENST00000517862 DYNLT1P63172 113 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 MEF2CQ06413 473 aaPredicted RBP1.94□□□□□ -2.1
CPNE3-204ENST00000517862 CEACAM21Q3KPI0 293 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 KRTAP19-2Q3LHN2 52 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 PABPC1L2AQ5JQF8 200 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 IDNKQ5T6J7 187 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 SMARCD3Q6STE5 483 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 PLEKHG7Q6ZR37 379 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 DPPA2Q7Z7J5 298 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 CALHM1Q8IU99 346 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 C10orf107Q8IVU9 208 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 C20orf196Q8IYI0 205 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 CLDN22Q8N7P3 220 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 Q8N814 137 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 C15orf56Q8N910 161 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 OR1S1Q8NH92 325 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 ACTL9Q8TC94 416 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 CASTOR1Q8WTX7 329 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 BLNKQ8WV28 456 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 EEF1AKMT1Q8WVE0 214 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 MRAP2Q96G30 205 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 PGLYRP3Q96LB9 341 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 C6orf62Q9GZU0 229 aaPredicted RBP1.94□□□□□ -2.1
CPNE3-204ENST00000517862 DNAJC27Q9NZQ0 273 aa1.94□□□□□ -2.1
CPNE3-204ENST00000517862 A0A096LNJ9 63 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 H3BP45 60 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 BHLHE40O14503 412 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 PFDN6O15212 129 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 FABP7O15540 132 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 ATP8B1O43520 1251 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 SERPINA1P01009 418 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 PVALBP20472 110 aaPredicted RBP1.93□□□□□ -2.1
CPNE3-204ENST00000517862 HLA-DMAP28067 261 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 TSPOP30536 169 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 TGFBR1P36897 503 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 CD200P41217 278 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 PSMB2P49721 201 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 WNT4P56705 351 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 CLDN12P56749 244 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 BNIP2Q12982 314 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 C1DQ13901 141 aaKnown RBP1.93□□□□□ -2.1
CPNE3-204ENST00000517862 OR2T2Q6IF00 324 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 NTM-AS1Q6ZSK4 140 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 ZNF826PQ6ZT77 177 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 MRPL52Q86TS9 123 aaKnown RBP1.93□□□□□ -2.1
CPNE3-204ENST00000517862 MMGT1Q8N4V1 131 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 ZNF563Q8TA94 476 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 DYNC2LI1Q8TCX1 351 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 SMIM8Q96KF7 97 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 QKIQ96PU8 341 aaKnown RBP eCLIP1.93□□□□□ -2.1
CPNE3-204ENST00000517862 HSPB9Q9BQS6 159 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 EFCAB11Q9BUY7 163 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 KIFC1Q9BW19 673 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 TAPBPLQ9BX59 468 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 RPP21Q9H633 154 aaKnown RBP1.93□□□□□ -2.1
CPNE3-204ENST00000517862 C8orf17Q9NRJ1 99 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 NKIRAS1Q9NYS0 192 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 RBM12B-AS1Q9P1G2 102 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 TP53TG3Q9ULZ0 132 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 NDUFAF1Q9Y375 327 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 LRRC42Q9Y546 428 aa1.93□□□□□ -2.1
CPNE3-204ENST00000517862 IGLV1-50A0A075B6I6 118 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 IGHV3OR16-8A0A075B7F1 116 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 TMED7-TICAM2A0A0A6YYA0 188 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 A0A0D9SG52 128 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 TMEM72A0PK05 275 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 TMEM213A2RRL7 107 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 LEUTXA8MZ59 168 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 MFNGO00587 321 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 OR2A4O95047 310 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 KCNK2O95069 426 aa1.92□□□□□ -2.1
CPNE3-204ENST00000517862 APCSP02743 223 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms