RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 OR8U1Q8NH10 309 aa2.17□□□□□ -2.06
SKP1-204ENST00000517691 OR56B4Q8NH76 319 aa2.17□□□□□ -2.06
SKP1-204ENST00000517691 MCFD2Q8NI22 146 aa2.17□□□□□ -2.06
SKP1-204ENST00000517691 ZNF502Q8TBZ5 544 aa2.17□□□□□ -2.06
SKP1-204ENST00000517691 ADTRPQ96IZ2 230 aa2.17□□□□□ -2.06
SKP1-204ENST00000517691 YPEL2Q96QA6 119 aa2.17□□□□□ -2.06
SKP1-204ENST00000517691 CABLES2Q9BTV7 478 aa2.17□□□□□ -2.06
SKP1-204ENST00000517691 MCUBQ9NWR8 336 aa2.17□□□□□ -2.06
SKP1-204ENST00000517691 MSRB1Q9NZV6 116 aa2.17□□□□□ -2.06
SKP1-204ENST00000517691 RSL24D1Q9UHA3 163 aaKnown RBP2.17□□□□□ -2.06
SKP1-204ENST00000517691 VPREB3Q9UKI3 123 aa2.17□□□□□ -2.06
SKP1-204ENST00000517691 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.16□□□□□ -2.06
SKP1-204ENST00000517691 C2CD3Q4AC94 2353 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 IGKV1D-8A0A087WSZ0 117 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 SAA2-SAA4A0A096LPE2 208 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 IGHV1-3A0A0C4DH29 117 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 IGKV1-6A0A0C4DH72 117 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 ANKRD20A5PA0PJZ0 165 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 A6NDX4 124 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 OOSP1A8MZH6 123 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 SEC14L6B5MCN3 397 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 H7C2Y5 167 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 M0R036 132 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 SNAPINO95295 136 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 CNIH1O95406 144 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 IGKV1D-33P01593 117 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 IGKV1-33P01594 117 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 PMP2P02689 132 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 SAA2P0DJI9 122 aaPredicted RBP2.16□□□□□ -2.06
SKP1-204ENST00000517691 NFYAP23511 347 aaPredicted RBP2.16□□□□□ -2.06
SKP1-204ENST00000517691 GNRHRP30968 328 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 FCGR2CP31995 323 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 CAV2P51636 162 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 PROK1P58294 105 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 SSBP2P81877 361 aaPredicted RBP2.16□□□□□ -2.06
SKP1-204ENST00000517691 OR5I1Q13606 314 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 HERPUD1Q15011 391 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 OXA1LQ15070 435 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 SRSF7Q16629 238 aaKnown RBP eCLIP2.16□□□□□ -2.06
SKP1-204ENST00000517691 BSXQ3C1V8 233 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 RPL39P5Q59GN2 51 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 PDZD11Q5EBL8 140 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 CNIH2Q6PI25 160 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 ACOT7LQ6ZUV0 252 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 LYG2Q86SG7 212 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 HOGA1Q86XE5 327 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 PUSL1Q8N0Z8 303 aaKnown RBP2.16□□□□□ -2.06
SKP1-204ENST00000517691 ARRDC1Q8N5I2 433 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 LINC00311Q8N616 119 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 ZNF439Q8NDP4 499 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 OR4C13Q8NGP0 309 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 OR5H2Q8NGV7 314 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 PIFOQ8TCI5 191 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 RTN4IP1Q8WWV3 396 aaPredicted RBP2.16□□□□□ -2.06
SKP1-204ENST00000517691 RBMXL1Q96E39 390 aaKnown RBP2.16□□□□□ -2.06
SKP1-204ENST00000517691 DIRAS2Q96HU8 199 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 ABHD14BQ96IU4 210 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 MRPL20Q9BYC9 149 aaKnown RBP2.16□□□□□ -2.06
SKP1-204ENST00000517691 PARP12Q9H0J9 701 aaKnown RBP2.16□□□□□ -2.06
SKP1-204ENST00000517691 OR2D2Q9H210 308 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 RBKSQ9H477 322 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 CCDC59Q9P031 241 aaKnown RBP2.16□□□□□ -2.06
SKP1-204ENST00000517691 ZNF107Q9UII5 783 aaPredicted RBP2.16□□□□□ -2.06
SKP1-204ENST00000517691 ANXA10Q9UJ72 324 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 SIGLEC9Q9Y336 463 aa2.16□□□□□ -2.06
SKP1-204ENST00000517691 YLPM1P49750 1951 aaKnown RBP2.15□□□□□ -2.06
SKP1-204ENST00000517691 TRBV6-7A0A0A0MS04 114 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 A0A1B0GU03 582 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 A0A1W2PPI3 338 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 ZNF736B4DX44 427 aaPredicted RBP2.15□□□□□ -2.06
SKP1-204ENST00000517691 M0R1X1 148 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 MOSP00540 346 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 IGLV2-14P01704 120 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 HLA-DQB1P01920 261 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 HBE1P02100 147 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 OR5H8P0DN80 308 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 M6PRP20645 277 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 MDKP21741 143 aaPredicted RBP2.15□□□□□ -2.06
SKP1-204ENST00000517691 HRH1P35367 487 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 RFX2P48378 723 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 DYNLT3P51808 116 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 TAS2R46P59540 309 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 FXYD4P59646 89 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 HERV-K104P61576 105 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 BLCAPP62952 87 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 ZNF816Q0VGE8 651 aaPredicted RBP2.15□□□□□ -2.06
SKP1-204ENST00000517691 TMEM187Q14656 261 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 CDK10Q15131 360 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 PLGLAQ15195 96 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 KRTAP21-3Q3LHN1 58 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 ABCA11PQ4W5N1 156 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 PYDC2Q56P42 97 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 PXDC1Q5TGL8 231 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 FAM131AQ6UXB0 335 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 Q6ZS49 121 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 H1FOOQ8IZA3 346 aaPredicted RBP2.15□□□□□ -2.06
SKP1-204ENST00000517691 HSD17B11Q8NBQ5 300 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 OR5AP2Q8NGF4 316 aa2.15□□□□□ -2.06
SKP1-204ENST00000517691 OR2T10Q8NGZ9 312 aa2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms