RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 SULT1A4P0DMN0 295 aa10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 NPBWR1P48145 328 aa10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 LGI3Q8N145 548 aa10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 OR52B4Q8NGK2 314 aa10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 DEDD2Q8WXF8 326 aa10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 SDHCQ99643 169 aaPredicted RBP10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 SLC25A21Q9BQT8 299 aaPredicted RBP10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 SRD5A3Q9H8P0 318 aa10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 HEYLQ9NQ87 328 aaPredicted RBP10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 SHPKQ9UHJ6 478 aa10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 IGHV3-49A0A0A0MS15 119 aa10.54□□□□□ -0.72
PDGFRB-202ENST00000517488 TMEM50AO95807 157 aa10.54□□□□□ -0.72
PDGFRB-202ENST00000517488 ANXA3P12429 323 aa10.54□□□□□ -0.72
PDGFRB-202ENST00000517488 OPRK1P41145 380 aa10.54□□□□□ -0.72
PDGFRB-202ENST00000517488 HTR2BP41595 481 aa10.54□□□□□ -0.72
PDGFRB-202ENST00000517488 ANKRD55Q3KP44 614 aa10.54□□□□□ -0.72
PDGFRB-202ENST00000517488 TMEM128Q5BJH2 165 aa10.54□□□□□ -0.72
PDGFRB-202ENST00000517488 TOMM20LQ6UXN7 152 aa10.54□□□□□ -0.72
PDGFRB-202ENST00000517488 SLC16A13Q7RTY0 426 aa10.54□□□□□ -0.72
PDGFRB-202ENST00000517488 TMEM170AQ8WVE7 144 aa10.54□□□□□ -0.72
PDGFRB-202ENST00000517488 OR10C1Q96KK4 312 aa10.54□□□□□ -0.72
PDGFRB-202ENST00000517488 SMPXQ9UHP9 88 aa10.54□□□□□ -0.72
PDGFRB-202ENST00000517488 NBEAL2Q6ZNJ1 2754 aa10.54□□□□□ -0.72
PDGFRB-202ENST00000517488 IGHV3OR16-13A0A075B7E8 117 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 IGHV3-74A0A0B4J1X5 117 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 IGHV7-4-1A0A0J9YVY3 117 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 LINC00854A0A1B0GVQ3 168 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 CHEK1O14757 476 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 TSPAN4O14817 238 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 VAMP1P23763 118 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 CCR6P51684 374 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 SRPXP78539 464 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 TNFRSF9Q07011 255 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 PPP1R1AQ13522 171 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 SMCO1Q147U7 214 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 TRIQKQ629K1 86 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 TMEM116Q8NCL8 245 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 SLC24A4Q8NFF2 622 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 OR4X1Q8NH49 305 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 RNF2Q99496 336 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 SPAG8Q99932 426 aaPredicted RBP10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 RHPN1-AS1Q9BWJ2 59 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 NDUFA13Q9P0J0 144 aa10.53□□□□□ -0.72
PDGFRB-202ENST00000517488 TRAV14DV4A0A0A6YYC5 116 aa10.52□□□□□ -0.73
PDGFRB-202ENST00000517488 A0A1B0GU03 582 aa10.52□□□□□ -0.73
PDGFRB-202ENST00000517488 CLN5O75503 358 aa10.52□□□□□ -0.73
PDGFRB-202ENST00000517488 INPP1P49441 399 aa10.52□□□□□ -0.73
PDGFRB-202ENST00000517488 C2orf83Q53S99 150 aa10.52□□□□□ -0.73
PDGFRB-202ENST00000517488 LAMTOR1Q6IAA8 161 aa10.52□□□□□ -0.73
PDGFRB-202ENST00000517488 ZNF600Q6ZNG1 722 aa10.52□□□□□ -0.73
PDGFRB-202ENST00000517488 SPATA25Q9BR10 227 aa10.52□□□□□ -0.73
PDGFRB-202ENST00000517488 RBKSQ9H477 322 aa10.52□□□□□ -0.73
PDGFRB-202ENST00000517488 ZFAND3Q9H8U3 227 aa10.52□□□□□ -0.73
PDGFRB-202ENST00000517488 RETNQ9HD89 108 aa10.52□□□□□ -0.73
PDGFRB-202ENST00000517488 HSPB7Q9UBY9 170 aa10.52□□□□□ -0.73
PDGFRB-202ENST00000517488 PUS1Q9Y606 427 aaKnown RBP eCLIP10.52□□□□□ -0.73
PDGFRB-202ENST00000517488 RYR3Q15413 4870 aa10.52□□□□□ -0.73
PDGFRB-202ENST00000517488 DYNC2H1Q8NCM8 4307 aaKnown RBP10.52□□□□□ -0.73
PDGFRB-202ENST00000517488 SFT2D2O95562 160 aa10.51□□□□□ -0.73
PDGFRB-202ENST00000517488 IGKV1-17P01599 117 aa10.51□□□□□ -0.73
PDGFRB-202ENST00000517488 APOHP02749 345 aaPredicted RBP10.51□□□□□ -0.73
PDGFRB-202ENST00000517488 NPY1RP25929 384 aa10.51□□□□□ -0.73
PDGFRB-202ENST00000517488 RBMS2Q15434 407 aaKnown RBP10.51□□□□□ -0.73
PDGFRB-202ENST00000517488 PRSS54Q6PEW0 395 aa10.51□□□□□ -0.73
PDGFRB-202ENST00000517488 CENPSQ8N2Z9 138 aa10.51□□□□□ -0.73
PDGFRB-202ENST00000517488 LRTM2Q8N967 370 aa10.51□□□□□ -0.73
PDGFRB-202ENST00000517488 CITED4Q96RK1 184 aa10.51□□□□□ -0.73
PDGFRB-202ENST00000517488 HIPK2Q9H2X6 1198 aa10.51□□□□□ -0.73
PDGFRB-202ENST00000517488 CACFD1Q9UGQ2 172 aa10.51□□□□□ -0.73
PDGFRB-202ENST00000517488 UBQLN2Q9UHD9 624 aa10.51□□□□□ -0.73
PDGFRB-202ENST00000517488 STARD9Q9P2P6 4700 aa10.5□□□□□ -0.73
PDGFRB-202ENST00000517488 SACSQ9NZJ4 4579 aa10.5□□□□□ -0.73
PDGFRB-202ENST00000517488 DUXBA0A1W2PPF3 345 aa10.5□□□□□ -0.73
PDGFRB-202ENST00000517488 RPS10-NUDT3A0A1W2PQS6 291 aa10.5□□□□□ -0.73
PDGFRB-202ENST00000517488 PITX3O75364 302 aa10.5□□□□□ -0.73
PDGFRB-202ENST00000517488 TIGITQ495A1 244 aa10.5□□□□□ -0.73
PDGFRB-202ENST00000517488 LILRB2Q8N423 598 aa10.5□□□□□ -0.73
PDGFRB-202ENST00000517488 OR1S1Q8NH92 325 aa10.5□□□□□ -0.73
PDGFRB-202ENST00000517488 RNASEH2CQ8TDP1 164 aaKnown RBP10.5□□□□□ -0.73
PDGFRB-202ENST00000517488 DTD1Q8TEA8 209 aa10.5□□□□□ -0.73
PDGFRB-202ENST00000517488 GINS3Q9BRX5 216 aa10.5□□□□□ -0.73
PDGFRB-202ENST00000517488 FLVCR2Q9UPI3 526 aa10.5□□□□□ -0.73
PDGFRB-202ENST00000517488 IGKV3-7A0A075B6H7 116 aa10.49□□□□□ -0.73
PDGFRB-202ENST00000517488 IGHV3-66A0A0C4DH42 116 aa10.49□□□□□ -0.73
PDGFRB-202ENST00000517488 NAP1L6A6NFF2 107 aa10.49□□□□□ -0.73
PDGFRB-202ENST00000517488 NDUFB6O95139 128 aa10.49□□□□□ -0.73
PDGFRB-202ENST00000517488 IFNA10P01566 189 aa10.49□□□□□ -0.73
PDGFRB-202ENST00000517488 IL7P13232 177 aa10.49□□□□□ -0.73
PDGFRB-202ENST00000517488 BTCP35070 178 aa10.49□□□□□ -0.73
PDGFRB-202ENST00000517488 RND2P52198 227 aa10.49□□□□□ -0.73
PDGFRB-202ENST00000517488 ODF3L2Q3SX64 289 aa10.49□□□□□ -0.73
PDGFRB-202ENST00000517488 FAM90A2PQ658T7 463 aa10.49□□□□□ -0.73
PDGFRB-202ENST00000517488 ST8SIA2Q92186 375 aa10.49□□□□□ -0.73
PDGFRB-202ENST00000517488 VSIRQ9H7M9 311 aa10.49□□□□□ -0.73
PDGFRB-202ENST00000517488 U3KQ87 197 aa10.49□□□□□ -0.73
PDGFRB-202ENST00000517488 PIGBOS1A0A0B4J2F0 54 aa10.48□□□□□ -0.73
PDGFRB-202ENST00000517488 OR4C46A6NHA9 309 aa10.48□□□□□ -0.73
PDGFRB-202ENST00000517488 HOXB5P09067 269 aa10.48□□□□□ -0.73
PDGFRB-202ENST00000517488 IGLC1P0CG04 106 aa10.48□□□□□ -0.73
PDGFRB-202ENST00000517488 SLC25A4P12235 298 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms