RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 ALKAL1Q6UXT8 129 aa0.43□□□□□ -2.34
SMARCA5-203ENST00000515531 SOSTDC1Q6X4U4 206 aa0.43□□□□□ -2.34
SMARCA5-203ENST00000515531 H1FXQ92522 213 aaKnown RBP0.43□□□□□ -2.34
SMARCA5-203ENST00000515531 SLC35B4Q969S0 331 aa0.43□□□□□ -2.34
SMARCA5-203ENST00000515531 TOMM6Q96B49 74 aa0.43□□□□□ -2.34
SMARCA5-203ENST00000515531 C11orf68Q9H3H3 251 aaKnown RBP0.43□□□□□ -2.34
SMARCA5-203ENST00000515531 U3KQ87 197 aa0.43□□□□□ -2.34
SMARCA5-203ENST00000515531 TRAV9-1A0A075B6T8 112 aa0.42□□□□□ -2.34
SMARCA5-203ENST00000515531 CCDC160A6NGH7 325 aa0.42□□□□□ -2.34
SMARCA5-203ENST00000515531 TNNC2P02585 160 aa0.42□□□□□ -2.34
SMARCA5-203ENST00000515531 C1orf137Q5JT78 98 aa0.42□□□□□ -2.34
SMARCA5-203ENST00000515531 C20orf196Q8IYI0 205 aa0.42□□□□□ -2.34
SMARCA5-203ENST00000515531 C4orf3Q8WVX3 66 aa0.42□□□□□ -2.34
SMARCA5-203ENST00000515531 GPR146Q96CH1 333 aa0.42□□□□□ -2.34
SMARCA5-203ENST00000515531 NIPSNAP1Q9BPW8 284 aa0.42□□□□□ -2.34
SMARCA5-203ENST00000515531 NKIRAS1Q9NYS0 192 aa0.42□□□□□ -2.34
SMARCA5-203ENST00000515531 SLC35A3Q9Y2D2 325 aa0.42□□□□□ -2.34
SMARCA5-203ENST00000515531 E9PCH4 1651 aa0.42□□□□□ -2.34
SMARCA5-203ENST00000515531 CEP192Q8TEP8 1941 aa0.41□□□□□ -2.34
SMARCA5-203ENST00000515531 EXOC1LA0A1B0GW35 172 aa0.41□□□□□ -2.34
SMARCA5-203ENST00000515531 ZNF736B4DX44 427 aaPredicted RBP0.41□□□□□ -2.34
SMARCA5-203ENST00000515531 TPM3P06753 285 aa0.41□□□□□ -2.34
SMARCA5-203ENST00000515531 SNRPD2P62316 118 aaKnown RBP0.41□□□□□ -2.34
SMARCA5-203ENST00000515531 OR10J5Q8NHC4 309 aa0.41□□□□□ -2.34
SMARCA5-203ENST00000515531 OR52E6Q96RD3 313 aa0.41□□□□□ -2.34
SMARCA5-203ENST00000515531 NHP2Q9NX24 153 aaKnown RBP0.41□□□□□ -2.34
SMARCA5-203ENST00000515531 HS3ST2Q9Y278 367 aa0.41□□□□□ -2.34
SMARCA5-203ENST00000515531 MUC5BQ9HC84 5762 aaPredicted RBP0.4□□□□□ -2.34
SMARCA5-203ENST00000515531 TNRC6AQ8NDV7 1962 aaKnown RBP0.4□□□□□ -2.35
SMARCA5-203ENST00000515531 CALB1P05937 261 aa0.4□□□□□ -2.35
SMARCA5-203ENST00000515531 CD79AP11912 226 aa0.4□□□□□ -2.35
SMARCA5-203ENST00000515531 CDC42P60953 191 aa0.4□□□□□ -2.35
SMARCA5-203ENST00000515531 PSME3P61289 254 aa0.4□□□□□ -2.35
SMARCA5-203ENST00000515531 SRSF6Q13247 344 aaKnown RBP0.4□□□□□ -2.35
SMARCA5-203ENST00000515531 TRAPPC6BQ86SZ2 158 aa0.4□□□□□ -2.35
SMARCA5-203ENST00000515531 ANKRD29Q8N6D5 301 aa0.4□□□□□ -2.35
SMARCA5-203ENST00000515531 MRPS26Q9BYN8 205 aaKnown RBP0.4□□□□□ -2.35
SMARCA5-203ENST00000515531 ATP6V1DQ9Y5K8 247 aa0.4□□□□□ -2.35
SMARCA5-203ENST00000515531 TMEM56-RWDD3S4R434 201 aa0.4□□□□□ -2.35
SMARCA5-203ENST00000515531 TRAV3A0A0B4J244 114 aa0.39□□□□□ -2.35
SMARCA5-203ENST00000515531 BUB1B-PAK6H3BSN5 160 aa0.39□□□□□ -2.35
SMARCA5-203ENST00000515531 DNAL4O96015 105 aa0.39□□□□□ -2.35
SMARCA5-203ENST00000515531 S100A4P26447 101 aaKnown RBP0.39□□□□□ -2.35
SMARCA5-203ENST00000515531 SPCS3P61009 180 aa0.39□□□□□ -2.35
SMARCA5-203ENST00000515531 TPM4P67936 248 aa0.39□□□□□ -2.35
SMARCA5-203ENST00000515531 HIST3H3Q16695 136 aa0.39□□□□□ -2.35
SMARCA5-203ENST00000515531 SPOPLQ6IQ16 392 aa0.39□□□□□ -2.35
SMARCA5-203ENST00000515531 GKN2Q86XP6 184 aa0.39□□□□□ -2.35
SMARCA5-203ENST00000515531 C3orf56Q8N813 242 aa0.39□□□□□ -2.35
SMARCA5-203ENST00000515531 OSTCQ9NRP0 149 aa0.39□□□□□ -2.35
SMARCA5-203ENST00000515531 HIST1H1TP22492 207 aaPredicted RBP0.38□□□□□ -2.35
SMARCA5-203ENST00000515531 RPL5P46777 297 aaKnown RBP0.38□□□□□ -2.35
SMARCA5-203ENST00000515531 EFNA4P52798 201 aa0.38□□□□□ -2.35
SMARCA5-203ENST00000515531 OR13D1Q8NGV5 346 aa0.38□□□□□ -2.35
SMARCA5-203ENST00000515531 PTH2Q96A98 100 aa0.38□□□□□ -2.35
SMARCA5-203ENST00000515531 C10orf95Q9H7T3 257 aa0.38□□□□□ -2.35
SMARCA5-203ENST00000515531 AHNAKQ09666 5890 aaKnown RBP0.38□□□□□ -2.35
SMARCA5-203ENST00000515531 MCM3APO60318 1980 aa0.37□□□□□ -2.35
SMARCA5-203ENST00000515531 FAAHO00519 579 aa0.37□□□□□ -2.35
SMARCA5-203ENST00000515531 CRYZL1O95825 349 aa0.37□□□□□ -2.35
SMARCA5-203ENST00000515531 DEFB113Q30KQ7 82 aa0.37□□□□□ -2.35
SMARCA5-203ENST00000515531 FAM74A1Q5RGS3 127 aa0.37□□□□□ -2.35
SMARCA5-203ENST00000515531 CLECL1Q8IZS7 167 aa0.37□□□□□ -2.35
SMARCA5-203ENST00000515531 TMEM86BQ8N661 226 aa0.37□□□□□ -2.35
SMARCA5-203ENST00000515531 ITFG2Q969R8 447 aa0.37□□□□□ -2.35
SMARCA5-203ENST00000515531 ZFC3H1O60293 1989 aaKnown RBP0.37□□□□□ -2.35
SMARCA5-203ENST00000515531 NUP155O75694 1391 aa0.36□□□□□ -2.35
SMARCA5-203ENST00000515531 TGOLN2O43493 480 aa0.36□□□□□ -2.35
SMARCA5-203ENST00000515531 PSG9Q00887 426 aa0.36□□□□□ -2.35
SMARCA5-203ENST00000515531 TEX47Q8TBZ9 253 aa0.36□□□□□ -2.35
SMARCA5-203ENST00000515531 PPP1R2P1Q96PQ5 205 aa0.36□□□□□ -2.35
SMARCA5-203ENST00000515531 PKIGQ9Y2B9 76 aa0.36□□□□□ -2.35
SMARCA5-203ENST00000515531 COL1A1P02452 1464 aaPredicted RBP0.35□□□□□ -2.35
SMARCA5-203ENST00000515531 CCL25O15444 150 aa0.35□□□□□ -2.35
SMARCA5-203ENST00000515531 SPRNQ5BIV9 151 aa0.35□□□□□ -2.35
SMARCA5-203ENST00000515531 C8orf74Q6P047 294 aa0.35□□□□□ -2.35
SMARCA5-203ENST00000515531 LINC00301Q8NCQ3 95 aa0.35□□□□□ -2.35
SMARCA5-203ENST00000515531 LLPHQ9BRT6 129 aaKnown RBP0.35□□□□□ -2.35
SMARCA5-203ENST00000515531 C6orf62Q9GZU0 229 aaPredicted RBP0.35□□□□□ -2.35
SMARCA5-203ENST00000515531 OR51V1Q9H2C8 321 aa0.35□□□□□ -2.35
SMARCA5-203ENST00000515531 V9GYY5 206 aaPredicted RBP0.35□□□□□ -2.35
SMARCA5-203ENST00000515531 ECM29Q5VYK3 1845 aa0.35□□□□□ -2.35
SMARCA5-203ENST00000515531 TGIF2-C20orf24A0A0A6YYL0 155 aa0.34□□□□□ -2.36
SMARCA5-203ENST00000515531 PIRO00625 290 aa0.34□□□□□ -2.36
SMARCA5-203ENST00000515531 HIST1H1EP10412 219 aaKnown RBP0.34□□□□□ -2.36
SMARCA5-203ENST00000515531 DEFA1P59665 94 aa0.34□□□□□ -2.36
SMARCA5-203ENST00000515531 RPS20P60866 119 aaKnown RBP0.34□□□□□ -2.36
SMARCA5-203ENST00000515531 YPEL3P61236 119 aaPredicted RBP0.34□□□□□ -2.36
SMARCA5-203ENST00000515531 MAGOHP61326 146 aaKnown RBP0.34□□□□□ -2.36
SMARCA5-203ENST00000515531 OR2F1Q13607 317 aa0.34□□□□□ -2.36
SMARCA5-203ENST00000515531 BRMS1LQ5PSV4 323 aa0.34□□□□□ -2.36
SMARCA5-203ENST00000515531 KRT222Q8N1A0 295 aa0.34□□□□□ -2.36
SMARCA5-203ENST00000515531 OR52R1Q8NGF1 315 aa0.34□□□□□ -2.36
SMARCA5-203ENST00000515531 TSPAN32Q96QS1 320 aa0.34□□□□□ -2.36
SMARCA5-203ENST00000515531 EPDR1Q9UM22 224 aa0.34□□□□□ -2.36
SMARCA5-203ENST00000515531 MYO3BQ8WXR4 1341 aa0.34□□□□□ -2.36
SMARCA5-203ENST00000515531 MAP3K5Q99683 1374 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 DENND4CQ5VZ89 1909 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 C7orf71A4D174 169 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 CETN3O15182 167 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms