RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 ZNF114Q8NC26 417 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 BPIFCQ8NFQ6 507 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 OR10G4Q8NGN3 311 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 OR10G9Q8NGN4 311 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 OR10G7Q8NGN6 311 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 NANPQ8TBE9 248 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 CACNG8Q8WXS5 425 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 LINC00527Q9UJ94 153 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 PXMP4Q9Y6I8 212 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 A6NDX4 124 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 G3V318 75 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 ATP6V0E1O15342 81 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 IGHV4-59P01825 116 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 LINC00869P0C866 280 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 RND2P52198 227 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 BLCAPP62952 87 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 ZNF90Q03938 601 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 FAM122CQ6P4D5 195 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 Q6ZS46 218 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 STPG3Q8N7X2 389 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 SLC35E1Q96K37 410 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 FOXC2Q99958 501 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 RARRES2Q99969 163 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 TMUB1Q9BVT8 246 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 SLC25A22Q9H936 323 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 SLC45A2Q9UMX9 530 aa7.21□□□□□ -1.26
CPNE4-213ENST00000515418 ANK3Q12955 4377 aaKnown RBP7.21□□□□□ -1.26
CPNE4-213ENST00000515418 IGKV1D-37A0A075B6S9 117 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 C9JQL5 133 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 FNDC10F2Z333 226 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 I3L2K1 104 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 CRYGCP07315 174 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 M6PRP20645 277 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 B2MP61769 119 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 RAB31Q13636 194 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 ECSCRQ19T08 205 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 TOR2AQ5JU69 321 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 TTC9CQ8N5M4 171 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 EIF4E3Q8N5X7 224 aaKnown RBP7.2□□□□□ -1.26
CPNE4-213ENST00000515418 NARS2Q96I59 477 aaKnown RBP7.2□□□□□ -1.26
CPNE4-213ENST00000515418 LINC00052Q96N35 136 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 FANCD2OSQ96PS1 177 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 SRSF8Q9BRL6 282 aaKnown RBP7.2□□□□□ -1.26
CPNE4-213ENST00000515418 SCRT1Q9BWW7 348 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 TMPRSS5Q9H3S3 457 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 SLC39A9Q9NUM3 307 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 MOB4Q9Y3A3 225 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 RAB19A4D1S5 217 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 FSHBP01225 129 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 RPL29P47914 159 aaKnown RBP7.2□□□□□ -1.26
CPNE4-213ENST00000515418 PRR20EP86478 221 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 PRR20CP86479 221 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 PRR20DP86480 221 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 PRR20BP86481 221 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 PRR20AP86496 221 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 UNQ5815/PRO19632Q6UWF5 114 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 DPPA3Q6W0C5 159 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 IL34Q6ZMJ4 242 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 SGMS2Q8NHU3 365 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 RAB24Q969Q5 203 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 EIF5A2Q9GZV4 153 aaKnown RBP7.2□□□□□ -1.26
CPNE4-213ENST00000515418 TREM1Q9NP99 234 aa7.2□□□□□ -1.26
CPNE4-213ENST00000515418 ZFP92A6NM28 416 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 K7EIM0 57 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 IGHV3-23P01764 117 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 MBP02144 154 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 IER3P46695 156 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 HAGHQ16775 308 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 ACOT6Q3I5F7 207 aaPredicted RBP7.19□□□□□ -1.26
CPNE4-213ENST00000515418 SPATA31B1PQ5VZV4 182 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 MBD3L1Q8WWY6 194 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 ZNF48Q96MX3 618 aaPredicted RBP7.19□□□□□ -1.26
CPNE4-213ENST00000515418 SEPSECSQ9HD40 501 aaKnown RBP7.19□□□□□ -1.26
CPNE4-213ENST00000515418 MAP1LC3B2A6NCE7 125 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 NPIPB5A8MRT5 1133 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 CYB5BO43169 146 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 OR2J3O76001 311 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 NDUFB8O95169 186 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 BPIFB3P59826 476 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 GUK1Q16774 197 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 ETFRF1Q6IPR1 90 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 CYP2G1PQ6ZSU1 146 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 TMEM116Q8NCL8 245 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 NOL4LQ96MY1 436 aaPredicted RBP7.19□□□□□ -1.26
CPNE4-213ENST00000515418 FAM210AQ96ND0 272 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 MS4A10Q96PG2 267 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 ACTR3CQ9C0K3 210 aaPredicted RBP7.19□□□□□ -1.26
CPNE4-213ENST00000515418 MAP1LC3BQ9GZQ8 125 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 ZNF355PQ9NSJ1 428 aa7.19□□□□□ -1.26
CPNE4-213ENST00000515418 SETD2Q9BYW2 2564 aaPredicted RBP7.18□□□□□ -1.26
CPNE4-213ENST00000515418 IGLV11-55A0A075B6I3 123 aa7.18□□□□□ -1.26
CPNE4-213ENST00000515418 LOC100996750A0A140TA64 210 aa7.18□□□□□ -1.26
CPNE4-213ENST00000515418 A0A1W2PPV4 95 aa7.18□□□□□ -1.26
CPNE4-213ENST00000515418 NUDT19A8MXV4 375 aa7.18□□□□□ -1.26
CPNE4-213ENST00000515418 CORTO00230 105 aa7.18□□□□□ -1.26
CPNE4-213ENST00000515418 CD5P06127 495 aa7.18□□□□□ -1.26
CPNE4-213ENST00000515418 KRTAP1-1Q07627 177 aa7.18□□□□□ -1.26
CPNE4-213ENST00000515418 SPNS3Q6ZMD2 512 aa7.18□□□□□ -1.26
CPNE4-213ENST00000515418 THAP8Q8NA92 274 aa7.18□□□□□ -1.26
CPNE4-213ENST00000515418 GATAD1Q8WUU5 269 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms