RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 GBGT1Q8N5D6 347 aa8.59□□□□□ -1.03
VCAN-212ENST00000515397 DUSP18Q8NEJ0 188 aa8.59□□□□□ -1.03
VCAN-212ENST00000515397 TMEM170AQ8WVE7 144 aa8.59□□□□□ -1.03
VCAN-212ENST00000515397 MARC2Q969Z3 335 aa8.59□□□□□ -1.03
VCAN-212ENST00000515397 GALNT14Q96FL9 552 aa8.59□□□□□ -1.03
VCAN-212ENST00000515397 CITED4Q96RK1 184 aa8.59□□□□□ -1.03
VCAN-212ENST00000515397 SDHCQ99643 169 aaPredicted RBP8.59□□□□□ -1.03
VCAN-212ENST00000515397 TXN2Q99757 166 aa8.59□□□□□ -1.03
VCAN-212ENST00000515397 RHPN1-AS1Q9BWJ2 59 aa8.59□□□□□ -1.03
VCAN-212ENST00000515397 SMPXQ9UHP9 88 aa8.59□□□□□ -1.03
VCAN-212ENST00000515397 IGHV7-4-1A0A0J9YVY3 117 aa8.58□□□□□ -1.04
VCAN-212ENST00000515397 A0A1B0GU03 582 aa8.58□□□□□ -1.04
VCAN-212ENST00000515397 INS-IGF2F8WCM5 200 aa8.58□□□□□ -1.04
VCAN-212ENST00000515397 K7EMT4 169 aa8.58□□□□□ -1.04
VCAN-212ENST00000515397 ZNF701M0R085 212 aaPredicted RBP8.58□□□□□ -1.04
VCAN-212ENST00000515397 CHEK1O14757 476 aa8.58□□□□□ -1.04
VCAN-212ENST00000515397 SULT1A3P0DMM9 295 aa8.58□□□□□ -1.04
VCAN-212ENST00000515397 SULT1A4P0DMN0 295 aa8.58□□□□□ -1.04
VCAN-212ENST00000515397 FCGR2BP31994 310 aaPredicted RBP8.58□□□□□ -1.04
VCAN-212ENST00000515397 NPBWR1P48145 328 aa8.58□□□□□ -1.04
VCAN-212ENST00000515397 RELQ04864 619 aaPredicted RBP8.58□□□□□ -1.04
VCAN-212ENST00000515397 TIGITQ495A1 244 aa8.58□□□□□ -1.04
VCAN-212ENST00000515397 PVRIGQ6DKI7 326 aa8.58□□□□□ -1.04
VCAN-212ENST00000515397 WFDC3Q8IUB2 231 aa8.58□□□□□ -1.04
VCAN-212ENST00000515397 TMEM116Q8NCL8 245 aa8.58□□□□□ -1.04
VCAN-212ENST00000515397 OR52E5Q8NH55 327 aa8.58□□□□□ -1.04
VCAN-212ENST00000515397 FLVCR2Q9UPI3 526 aa8.58□□□□□ -1.04
VCAN-212ENST00000515397 PUS1Q9Y606 427 aaKnown RBP eCLIP8.58□□□□□ -1.04
VCAN-212ENST00000515397 DNAH7Q8WXX0 4024 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 TRAV14DV4A0A0A6YYC5 116 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 TRAV25A0A0B4J276 109 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 A0A0B4J2A0 478 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 C15orf62A8K5M9 175 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 INPP1P49441 399 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 PPP1R1AQ13522 171 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 ZNF124Q15973 351 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 BSXQ3C1V8 233 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 AARDQ4LEZ3 155 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 NMSQ5H8A3 153 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 LGI3Q8N145 548 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 ST8SIA2Q92186 375 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 IL22RA2Q969J5 263 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 ATP6V0BQ99437 205 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 HIPK2Q9H2X6 1198 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 RBKSQ9H477 322 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 GAR1Q9NY12 217 aaKnown RBP8.57□□□□□ -1.04
VCAN-212ENST00000515397 SHPKQ9UHJ6 478 aa8.57□□□□□ -1.04
VCAN-212ENST00000515397 TSPAN4O14817 238 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 CLN5O75503 358 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 IFNA10P01566 189 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 HOXB5P09067 269 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 IAPPP10997 89 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 ANXA3P12429 323 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 HTR2BP41595 481 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 TNFRSF9Q07011 255 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 SMCO1Q147U7 214 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 TMEM128Q5BJH2 165 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 TRIQKQ629K1 86 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 ZFAND6Q6FIF0 208 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 LAMTOR1Q6IAA8 161 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 PRSS54Q6PEW0 395 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 APRG1Q8IVJ8 170 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 SLC24A4Q8NFF2 622 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 OR1S1Q8NH92 325 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 OR10C1Q96KK4 312 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 SPATA25Q9BR10 227 aa8.56□□□□□ -1.04
VCAN-212ENST00000515397 KMT2CQ8NEZ4 4911 aaKnown RBP8.56□□□□□ -1.04
VCAN-212ENST00000515397 DFFBO76075 338 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 SFT2D2O95562 160 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 IGKV1-17P01599 117 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 RPL35AP18077 110 aaKnown RBP8.55□□□□□ -1.04
VCAN-212ENST00000515397 NPY1RP25929 384 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 RND2P52198 227 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 ODF3L2Q3SX64 289 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 C2orf83Q53S99 150 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 ZNF600Q6ZNG1 722 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 TCF24Q7RTU0 167 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 CENPSQ8N2Z9 138 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 OR4X1Q8NH49 305 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 MUC7Q8TAX7 377 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 DTD1Q8TEA8 209 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 NPIPB3Q92617 1050 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 ACY3Q96HD9 319 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 SLC25A21Q9BQT8 299 aaPredicted RBP8.55□□□□□ -1.04
VCAN-212ENST00000515397 MAGT1Q9H0U3 335 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 ZFAND3Q9H8U3 227 aa8.55□□□□□ -1.04
VCAN-212ENST00000515397 PAIP2BQ9ULR5 123 aaKnown RBP8.55□□□□□ -1.04
VCAN-212ENST00000515397 CORTO00230 105 aa8.54□□□□□ -1.04
VCAN-212ENST00000515397 RPL11P62913 178 aaKnown RBP8.54□□□□□ -1.04
VCAN-212ENST00000515397 RBMS2Q15434 407 aaKnown RBP8.54□□□□□ -1.04
VCAN-212ENST00000515397 FAM90A2PQ658T7 463 aa8.54□□□□□ -1.04
VCAN-212ENST00000515397 SPAG8Q99932 426 aaPredicted RBP8.54□□□□□ -1.04
VCAN-212ENST00000515397 HSPB7Q9UBY9 170 aa8.54□□□□□ -1.04
VCAN-212ENST00000515397 LOC102724200A0A096LPH7 203 aaPredicted RBP8.53□□□□□ -1.04
VCAN-212ENST00000515397 MPTX1A8MV57 137 aa8.53□□□□□ -1.04
VCAN-212ENST00000515397 ADAP1O75689 374 aa8.53□□□□□ -1.04
VCAN-212ENST00000515397 IFNA4P05014 189 aa8.53□□□□□ -1.04
VCAN-212ENST00000515397 IGLC1P0CG04 106 aa8.53□□□□□ -1.04
VCAN-212ENST00000515397 IL7P13232 177 aa8.53□□□□□ -1.04
VCAN-212ENST00000515397 ANXA7P20073 488 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms