RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 ZNF414Q96IQ9 312 aa13.37□□□□□ -0.27
TRIM41-207ENST00000515223 IGLV3-32A0A0A0MS00 114 aa13.37□□□□□ -0.27
TRIM41-207ENST00000515223 VENTXO95231 258 aa13.37□□□□□ -0.27
TRIM41-207ENST00000515223 FER1L6-AS1Q8NA97 138 aa13.36□□□□□ -0.27
TRIM41-207ENST00000515223 ABCA1O95477 2261 aa13.36□□□□□ -0.27
TRIM41-207ENST00000515223 A0A1B0GW15 77 aa13.36□□□□□ -0.27
TRIM41-207ENST00000515223 FLVCR1-AS1Q8TAF5 88 aa13.36□□□□□ -0.27
TRIM41-207ENST00000515223 BEX4Q9NWD9 120 aaPredicted RBP13.36□□□□□ -0.27
TRIM41-207ENST00000515223 CD24P25063 80 aa13.36□□□□□ -0.27
TRIM41-207ENST00000515223 TMEM42Q69YG0 159 aa13.36□□□□□ -0.27
TRIM41-207ENST00000515223 OR5AN1Q8NGI8 311 aa13.36□□□□□ -0.27
TRIM41-207ENST00000515223 TIMM23O14925 209 aa13.36□□□□□ -0.27
TRIM41-207ENST00000515223 SAP30O75446 220 aa13.36□□□□□ -0.27
TRIM41-207ENST00000515223 MST1P26927 711 aa13.36□□□□□ -0.27
TRIM41-207ENST00000515223 OTX1P32242 354 aaPredicted RBP13.36□□□□□ -0.27
TRIM41-207ENST00000515223 C3orf36Q3SXR2 165 aa13.36□□□□□ -0.27
TRIM41-207ENST00000515223 ZNF815PA8K554 130 aa13.36□□□□□ -0.27
TRIM41-207ENST00000515223 FABP5P3A8MUU1 101 aa13.36□□□□□ -0.27
TRIM41-207ENST00000515223 WFDC1Q9HC57 220 aa13.36□□□□□ -0.27
TRIM41-207ENST00000515223 UQCR10Q9UDW1 63 aa13.36□□□□□ -0.27
TRIM41-207ENST00000515223 COLCA2A8K830 154 aa13.35□□□□□ -0.27
TRIM41-207ENST00000515223 FAM71F2Q6NXP2 309 aa13.35□□□□□ -0.27
TRIM41-207ENST00000515223 TMEM144Q7Z5S9 345 aa13.35□□□□□ -0.27
TRIM41-207ENST00000515223 FAM131CQ96AQ9 280 aa13.35□□□□□ -0.27
TRIM41-207ENST00000515223 RCC1LQ96I51 464 aaKnown RBP13.35□□□□□ -0.27
TRIM41-207ENST00000515223 SDK2Q58EX2 2172 aa13.35□□□□□ -0.27
TRIM41-207ENST00000515223 UBE2CO00762 179 aa13.35□□□□□ -0.27
TRIM41-207ENST00000515223 IGHV1-46P01743 117 aa13.35□□□□□ -0.27
TRIM41-207ENST00000515223 RNF125Q96EQ8 232 aa13.35□□□□□ -0.27
TRIM41-207ENST00000515223 F11RQ9Y624 299 aaKnown RBP13.35□□□□□ -0.27
TRIM41-207ENST00000515223 Q9H3A6 140 aa13.35□□□□□ -0.27
TRIM41-207ENST00000515223 CYTL1Q9NRR1 136 aa13.35□□□□□ -0.27
TRIM41-207ENST00000515223 PRB3Q04118 309 aaPredicted RBP13.35□□□□□ -0.27
TRIM41-207ENST00000515223 PLPPR1Q8TBJ4 325 aa13.35□□□□□ -0.27
TRIM41-207ENST00000515223 PMCHL2Q9BQD1 86 aa13.35□□□□□ -0.27
TRIM41-207ENST00000515223 TMEM8BA6NDV4 472 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 RSPO3Q9BXY4 272 aaPredicted RBP13.34□□□□□ -0.27
TRIM41-207ENST00000515223 SCN8AQ9UQD0 1980 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 TSC2P49815 1807 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 RBMY1BA6NDE4 496 aaKnown RBP13.34□□□□□ -0.27
TRIM41-207ENST00000515223 RBMY1EA6NEQ0 496 aaKnown RBP13.34□□□□□ -0.27
TRIM41-207ENST00000515223 RBMY1DP0C7P1 496 aaKnown RBP13.34□□□□□ -0.27
TRIM41-207ENST00000515223 RBMY1A1P0DJD3 496 aaKnown RBP13.34□□□□□ -0.27
TRIM41-207ENST00000515223 RBMY1CP0DJD4 496 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 PAX8Q06710 450 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 GLMPQ8WWB7 406 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 TRAV41A0A0B4J266 112 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 LILRA1O75019 489 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 MORN2Q502X0 79 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 MUC21Q5SSG8 566 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 OTORQ9NRC9 128 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 COL6A6A6NMZ7 2263 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 TRGV11A0A075B6L2 103 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 IGKV1D-8A0A087WSZ0 117 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 TRAV21A0A0B4J279 112 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 CCL20P78556 96 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 C3orf56Q8N813 242 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 KLHDC3Q9BQ90 382 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 PLSCR4Q9NRQ2 329 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 SOD3P08294 240 aa13.34□□□□□ -0.27
TRIM41-207ENST00000515223 FOXA3P55318 350 aaPredicted RBP13.34□□□□□ -0.27
TRIM41-207ENST00000515223 TRAV8-6A0A0B4J262 113 aa13.33□□□□□ -0.27
TRIM41-207ENST00000515223 LINC00271P0C7V0 271 aa13.33□□□□□ -0.27
TRIM41-207ENST00000515223 ATOH7Q8N100 152 aa13.33□□□□□ -0.27
TRIM41-207ENST00000515223 C18orf15Q96N68 181 aa13.33□□□□□ -0.27
TRIM41-207ENST00000515223 JKAMPQ9P055 326 aa13.33□□□□□ -0.27
TRIM41-207ENST00000515223 TRBV6-7A0A0A0MS04 114 aa13.33□□□□□ -0.28
TRIM41-207ENST00000515223 E9PQ18 207 aa13.33□□□□□ -0.28
TRIM41-207ENST00000515223 ZNF585BQ52M93 769 aa13.33□□□□□ -0.28
TRIM41-207ENST00000515223 TCF23Q7RTU1 214 aa13.33□□□□□ -0.28
TRIM41-207ENST00000515223 RPP21Q9H633 154 aaKnown RBP13.33□□□□□ -0.28
TRIM41-207ENST00000515223 CRIPAKQ8N1N5 446 aa13.33□□□□□ -0.28
TRIM41-207ENST00000515223 NCOR1O75376 2440 aa13.33□□□□□ -0.28
TRIM41-207ENST00000515223 IGKV1-9A0A0C4DH69 117 aa13.33□□□□□ -0.28
TRIM41-207ENST00000515223 TRBV7-9A0A0J9YWB2 115 aa13.33□□□□□ -0.28
TRIM41-207ENST00000515223 ZNF319Q9P2F9 582 aa13.33□□□□□ -0.28
TRIM41-207ENST00000515223 TFF3Q07654 80 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 ADCYAP1P18509 176 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 KIR3DL3Q8N743 410 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 ST6GALNAC3Q8NDV1 305 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 SLC25A20O43772 301 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 CD5P06127 495 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 FOXF2Q12947 444 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 OR10J3Q5JRS4 329 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 SSC4DQ8WTU2 575 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 PINLYPA6NC86 204 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 C15orf61A6NNL5 157 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 OOSP1A8MZH6 123 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 SLC25A16P16260 332 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 PLP1P60201 277 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 OR9G4Q8NGQ1 327 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 MSRB2Q9Y3D2 182 aa13.32□□□□□ -0.28
TRIM41-207ENST00000515223 CBLN1P23435 193 aa13.31□□□□□ -0.28
TRIM41-207ENST00000515223 GTF3AQ92664 365 aaKnown RBP13.31□□□□□ -0.28
TRIM41-207ENST00000515223 MUC21A0A0G2JKD1 596 aa13.31□□□□□ -0.28
TRIM41-207ENST00000515223 MUC21A0A140T8X8 626 aa13.31□□□□□ -0.28
TRIM41-207ENST00000515223 GFI1BQ5VTD9 330 aa13.31□□□□□ -0.28
TRIM41-207ENST00000515223 NUDT11Q96G61 164 aa13.31□□□□□ -0.28
TRIM41-207ENST00000515223 C18orf12Q96KH6 178 aa13.31□□□□□ -0.28
TRIM41-207ENST00000515223 LYZL4Q96KX0 146 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms