RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 AP3S2P59780 193 aa18.28■□□□□ 0.52
SNF8-213ENST00000514929 TMEM187Q14656 261 aa18.28■□□□□ 0.52
SNF8-213ENST00000514929 IL22RA2Q969J5 263 aa18.28■□□□□ 0.52
SNF8-213ENST00000514929 GINS3Q9BRX5 216 aa18.28■□□□□ 0.52
SNF8-213ENST00000514929 GGTLC1Q9BX51 225 aa18.28■□□□□ 0.52
SNF8-213ENST00000514929 PRR13Q9NZ81 148 aa18.28■□□□□ 0.52
SNF8-213ENST00000514929 UBQLN2Q9UHD9 624 aa18.28■□□□□ 0.52
SNF8-213ENST00000514929 V9GYH0 126 aa18.28■□□□□ 0.52
SNF8-213ENST00000514929 LOC102724200A0A096LPH7 203 aaPredicted RBP18.27■□□□□ 0.52
SNF8-213ENST00000514929 OR4C46A6NHA9 309 aa18.27■□□□□ 0.52
SNF8-213ENST00000514929 CHEK1O14757 476 aa18.27■□□□□ 0.52
SNF8-213ENST00000514929 HTR2BP41595 481 aa18.27■□□□□ 0.52
SNF8-213ENST00000514929 KLF9Q13886 244 aaPredicted RBP18.27■□□□□ 0.52
SNF8-213ENST00000514929 TOMM5Q8N4H5 51 aa18.27■□□□□ 0.52
SNF8-213ENST00000514929 TRIM63Q969Q1 353 aa18.27■□□□□ 0.52
SNF8-213ENST00000514929 RNF2Q99496 336 aa18.27■□□□□ 0.52
SNF8-213ENST00000514929 RBM38Q9H0Z9 239 aaKnown RBP18.27■□□□□ 0.52
SNF8-213ENST00000514929 CEBPZOSA8MTT3 80 aa18.26■□□□□ 0.51
SNF8-213ENST00000514929 TMEM50AO95807 157 aa18.26■□□□□ 0.51
SNF8-213ENST00000514929 BSXQ3C1V8 233 aa18.26■□□□□ 0.51
SNF8-213ENST00000514929 TOMM20LQ6UXN7 152 aa18.26■□□□□ 0.51
SNF8-213ENST00000514929 ZNF600Q6ZNG1 722 aa18.26■□□□□ 0.51
SNF8-213ENST00000514929 DNAH7Q8WXX0 4024 aa18.26■□□□□ 0.51
SNF8-213ENST00000514929 IGHV3OR16-13A0A075B7E8 117 aa18.25■□□□□ 0.51
SNF8-213ENST00000514929 IGHV3-74A0A0B4J1X5 117 aa18.25■□□□□ 0.51
SNF8-213ENST00000514929 NXPH3O95157 252 aa18.25■□□□□ 0.51
SNF8-213ENST00000514929 SULT1A3P0DMM9 295 aa18.25■□□□□ 0.51
SNF8-213ENST00000514929 SULT1A4P0DMN0 295 aa18.25■□□□□ 0.51
SNF8-213ENST00000514929 ANXA3P12429 323 aa18.25■□□□□ 0.51
SNF8-213ENST00000514929 FNDC4Q9H6D8 234 aaPredicted RBP18.25■□□□□ 0.51
SNF8-213ENST00000514929 CACFD1Q9UGQ2 172 aa18.25■□□□□ 0.51
SNF8-213ENST00000514929 PUS1Q9Y606 427 aaKnown RBP eCLIP18.25■□□□□ 0.51
SNF8-213ENST00000514929 SCGB2A1O75556 95 aa18.24■□□□□ 0.51
SNF8-213ENST00000514929 BMI1P35226 326 aa18.24■□□□□ 0.51
SNF8-213ENST00000514929 SUPT4H1P63272 117 aaKnown RBP18.24■□□□□ 0.51
SNF8-213ENST00000514929 ZNF79Q15937 498 aa18.24■□□□□ 0.51
SNF8-213ENST00000514929 MLANAQ16655 118 aa18.24■□□□□ 0.51
SNF8-213ENST00000514929 ZFAND6Q6FIF0 208 aa18.24■□□□□ 0.51
SNF8-213ENST00000514929 MRPL36Q9P0J6 103 aaKnown RBP18.24■□□□□ 0.51
SNF8-213ENST00000514929 RPS10-NUDT3A0A1W2PQS6 291 aa18.23■□□□□ 0.51
SNF8-213ENST00000514929 ZNF701M0R085 212 aaPredicted RBP18.23■□□□□ 0.51
SNF8-213ENST00000514929 CLN5O75503 358 aa18.23■□□□□ 0.51
SNF8-213ENST00000514929 ODF3L2Q3SX64 289 aa18.23■□□□□ 0.51
SNF8-213ENST00000514929 TMED4Q7Z7H5 227 aa18.23■□□□□ 0.51
SNF8-213ENST00000514929 CCDC190Q86UF4 302 aa18.23■□□□□ 0.51
SNF8-213ENST00000514929 LGI3Q8N145 548 aa18.23■□□□□ 0.51
SNF8-213ENST00000514929 SLC24A4Q8NFF2 622 aa18.23■□□□□ 0.51
SNF8-213ENST00000514929 OR4X1Q8NH49 305 aa18.23■□□□□ 0.51
SNF8-213ENST00000514929 IGKV3-7A0A075B6H7 116 aa18.22■□□□□ 0.51
SNF8-213ENST00000514929 A0A0B4J2A0 478 aa18.22■□□□□ 0.51
SNF8-213ENST00000514929 TFPI2P48307 235 aa18.22■□□□□ 0.51
SNF8-213ENST00000514929 SRPXP78539 464 aa18.22■□□□□ 0.51
SNF8-213ENST00000514929 C2orf83Q53S99 150 aa18.22■□□□□ 0.51
SNF8-213ENST00000514929 LYZL2Q7Z4W2 148 aa18.22■□□□□ 0.51
SNF8-213ENST00000514929 ZFAND3Q9H8U3 227 aa18.22■□□□□ 0.51
SNF8-213ENST00000514929 SHPKQ9UHJ6 478 aa18.22■□□□□ 0.51
SNF8-213ENST00000514929 A0A1B0GU03 582 aa18.21■□□□□ 0.51
SNF8-213ENST00000514929 CCR6P51684 374 aa18.21■□□□□ 0.51
SNF8-213ENST00000514929 SPANXN2Q5MJ10 180 aa18.21■□□□□ 0.51
SNF8-213ENST00000514929 APOC4P55056 127 aa18.2■□□□□ 0.5
SNF8-213ENST00000514929 SMCO1Q147U7 214 aa18.2■□□□□ 0.5
SNF8-213ENST00000514929 NMSQ5H8A3 153 aa18.2■□□□□ 0.5
SNF8-213ENST00000514929 TCF24Q7RTU0 167 aa18.2■□□□□ 0.5
SNF8-213ENST00000514929 RNASEH2CQ8TDP1 164 aaKnown RBP18.2■□□□□ 0.5
SNF8-213ENST00000514929 DEDD2Q8WXF8 326 aa18.2■□□□□ 0.5
SNF8-213ENST00000514929 ST8SIA2Q92186 375 aa18.2■□□□□ 0.5
SNF8-213ENST00000514929 TRAV30A0A087WSZ9 112 aa18.19■□□□□ 0.5
SNF8-213ENST00000514929 PIGBOS1A0A0B4J2F0 54 aa18.19■□□□□ 0.5
SNF8-213ENST00000514929 APOHP02749 345 aaPredicted RBP18.19■□□□□ 0.5
SNF8-213ENST00000514929 CD5P06127 495 aa18.19■□□□□ 0.5
SNF8-213ENST00000514929 NPY1RP25929 384 aa18.19■□□□□ 0.5
SNF8-213ENST00000514929 PAFAH1B2P68402 229 aa18.19■□□□□ 0.5
SNF8-213ENST00000514929 TNFRSF9Q07011 255 aa18.19■□□□□ 0.5
SNF8-213ENST00000514929 TMEM128Q5BJH2 165 aa18.19■□□□□ 0.5
SNF8-213ENST00000514929 FAM90A2PQ658T7 463 aa18.19■□□□□ 0.5
SNF8-213ENST00000514929 NOXA1Q86UR1 476 aa18.19■□□□□ 0.5
SNF8-213ENST00000514929 GBGT1Q8N5D6 347 aa18.19■□□□□ 0.5
SNF8-213ENST00000514929 VSIRQ9H7M9 311 aa18.19■□□□□ 0.5
SNF8-213ENST00000514929 IGHV3-66A0A0C4DH42 116 aa18.18■□□□□ 0.5
SNF8-213ENST00000514929 SLC25A4P12235 298 aa18.18■□□□□ 0.5
SNF8-213ENST00000514929 NPPCP23582 126 aa18.18■□□□□ 0.5
SNF8-213ENST00000514929 VAMP1P23763 118 aa18.18■□□□□ 0.5
SNF8-213ENST00000514929 CMC4P56277 68 aaPredicted RBP18.18■□□□□ 0.5
SNF8-213ENST00000514929 TIGITQ495A1 244 aa18.18■□□□□ 0.5
SNF8-213ENST00000514929 SLC25A21Q9BQT8 299 aaPredicted RBP18.18■□□□□ 0.5
SNF8-213ENST00000514929 TMEM231Q9H6L2 316 aa18.18■□□□□ 0.5
SNF8-213ENST00000514929 HSPB7Q9UBY9 170 aa18.18■□□□□ 0.5
SNF8-213ENST00000514929 IFNA10P01566 189 aa18.17■□□□□ 0.5
SNF8-213ENST00000514929 RND2P52198 227 aa18.17■□□□□ 0.5
SNF8-213ENST00000514929 RPL11P62913 178 aaKnown RBP18.17■□□□□ 0.5
SNF8-213ENST00000514929 OR1S1Q8NH92 325 aa18.17■□□□□ 0.5
SNF8-213ENST00000514929 METTL26Q96S19 204 aa18.17■□□□□ 0.5
SNF8-213ENST00000514929 IGKV1-17P01599 117 aa18.16■□□□□ 0.5
SNF8-213ENST00000514929 RPL35AP18077 110 aaKnown RBP18.16■□□□□ 0.5
SNF8-213ENST00000514929 ETFRF1Q6IPR1 90 aa18.16■□□□□ 0.5
SNF8-213ENST00000514929 PRSS54Q6PEW0 395 aa18.16■□□□□ 0.5
SNF8-213ENST00000514929 APRG1Q8IVJ8 170 aa18.16■□□□□ 0.5
SNF8-213ENST00000514929 IL17DQ8TAD2 202 aa18.16■□□□□ 0.5
SNF8-213ENST00000514929 DTD1Q8TEA8 209 aa18.16■□□□□ 0.5
SNF8-213ENST00000514929 TMEM170AQ8WVE7 144 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms