RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 SLC25A4P12235 298 aa10.9□□□□□ -0.66
NUP54-216ENST00000514901 OPRK1P41145 380 aa10.9□□□□□ -0.66
NUP54-216ENST00000514901 RAB11AP62491 216 aa10.9□□□□□ -0.66
NUP54-216ENST00000514901 RELQ04864 619 aaPredicted RBP10.9□□□□□ -0.66
NUP54-216ENST00000514901 UBAC2Q8NBM4 344 aa10.9□□□□□ -0.66
NUP54-216ENST00000514901 OR4D5Q8NGN0 318 aa10.9□□□□□ -0.66
NUP54-216ENST00000514901 ZNF436Q9C0F3 470 aaPredicted RBP10.9□□□□□ -0.66
NUP54-216ENST00000514901 F8W735 103 aaPredicted RBP10.89□□□□□ -0.67
NUP54-216ENST00000514901 GNG7O60262 68 aa10.89□□□□□ -0.67
NUP54-216ENST00000514901 PTTG1O95997 202 aa10.89□□□□□ -0.67
NUP54-216ENST00000514901 CTSGP08311 255 aa10.89□□□□□ -0.67
NUP54-216ENST00000514901 IL34Q6ZMJ4 242 aa10.89□□□□□ -0.67
NUP54-216ENST00000514901 ZBTB8BQ8NAP8 495 aaPredicted RBP10.89□□□□□ -0.67
NUP54-216ENST00000514901 OR4X1Q8NH49 305 aa10.89□□□□□ -0.67
NUP54-216ENST00000514901 OR10C1Q96KK4 312 aa10.89□□□□□ -0.67
NUP54-216ENST00000514901 MAGT1Q9H0U3 335 aa10.89□□□□□ -0.67
NUP54-216ENST00000514901 GSKIPQ9P0R6 139 aa10.89□□□□□ -0.67
NUP54-216ENST00000514901 TRAV30A0A087WSZ9 112 aa10.88□□□□□ -0.67
NUP54-216ENST00000514901 ZNF320A2RRD8 509 aa10.88□□□□□ -0.67
NUP54-216ENST00000514901 C5orf51A6NDU8 294 aa10.88□□□□□ -0.67
NUP54-216ENST00000514901 FAM25EA8MYX2 175 aa10.88□□□□□ -0.67
NUP54-216ENST00000514901 NDUFA4O00483 81 aa10.88□□□□□ -0.67
NUP54-216ENST00000514901 IFNA4P05014 189 aa10.88□□□□□ -0.67
NUP54-216ENST00000514901 CSN3P07498 182 aa10.88□□□□□ -0.67
NUP54-216ENST00000514901 IAPPP10997 89 aa10.88□□□□□ -0.67
NUP54-216ENST00000514901 GPX4P36969 197 aaPredicted RBP10.88□□□□□ -0.67
NUP54-216ENST00000514901 ELLP55199 621 aaPredicted RBP10.88□□□□□ -0.67
NUP54-216ENST00000514901 DEFA6Q01524 100 aa10.88□□□□□ -0.67
NUP54-216ENST00000514901 GSG1LQ6UXU4 331 aa10.88□□□□□ -0.67
NUP54-216ENST00000514901 TMEM170AQ8WVE7 144 aa10.88□□□□□ -0.67
NUP54-216ENST00000514901 CACNG8Q8WXS5 425 aa10.88□□□□□ -0.67
NUP54-216ENST00000514901 CHRDL1Q9BU40 450 aa10.88□□□□□ -0.67
NUP54-216ENST00000514901 FNDC4Q9H6D8 234 aaPredicted RBP10.88□□□□□ -0.67
NUP54-216ENST00000514901 ZC4H2Q9NQZ6 224 aa10.88□□□□□ -0.67
NUP54-216ENST00000514901 UFC1Q9Y3C8 167 aa10.88□□□□□ -0.67
NUP54-216ENST00000514901 A8MWP6 167 aa10.87□□□□□ -0.67
NUP54-216ENST00000514901 CLN5O75503 358 aa10.87□□□□□ -0.67
NUP54-216ENST00000514901 TMEM50AO95807 157 aa10.87□□□□□ -0.67
NUP54-216ENST00000514901 IGHV3-48P01763 117 aa10.87□□□□□ -0.67
NUP54-216ENST00000514901 ADMP35318 185 aa10.87□□□□□ -0.67
NUP54-216ENST00000514901 POLR2GP62487 172 aaKnown RBP eCLIP10.87□□□□□ -0.67
NUP54-216ENST00000514901 DCTN2Q13561 401 aaKnown RBP10.87□□□□□ -0.67
NUP54-216ENST00000514901 TMEM116Q8NCL8 245 aa10.87□□□□□ -0.67
NUP54-216ENST00000514901 MARC2Q969Z3 335 aa10.87□□□□□ -0.67
NUP54-216ENST00000514901 SMIM8Q96KF7 97 aa10.87□□□□□ -0.67
NUP54-216ENST00000514901 C2orf50Q96LR7 162 aa10.87□□□□□ -0.67
NUP54-216ENST00000514901 RAB40CQ96S21 281 aa10.87□□□□□ -0.67
NUP54-216ENST00000514901 MEGF8Q7Z7M0 2845 aa10.87□□□□□ -0.67
NUP54-216ENST00000514901 C2orf70A6NJV1 201 aa10.86□□□□□ -0.67
NUP54-216ENST00000514901 C15orf62A8K5M9 175 aa10.86□□□□□ -0.67
NUP54-216ENST00000514901 IGLV1-51P01701 117 aa10.86□□□□□ -0.67
NUP54-216ENST00000514901 TAS2R30P59541 319 aa10.86□□□□□ -0.67
NUP54-216ENST00000514901 KRTAP10-11P60412 298 aa10.86□□□□□ -0.67
NUP54-216ENST00000514901 CD69Q07108 199 aa10.86□□□□□ -0.67
NUP54-216ENST00000514901 MLANAQ16655 118 aa10.86□□□□□ -0.67
NUP54-216ENST00000514901 PRSS54Q6PEW0 395 aa10.86□□□□□ -0.67
NUP54-216ENST00000514901 TMEM190Q8WZ59 177 aa10.86□□□□□ -0.67
NUP54-216ENST00000514901 TECRQ9NZ01 308 aaKnown RBP10.86□□□□□ -0.67
NUP54-216ENST00000514901 STRAPQ9Y3F4 350 aaKnown RBP10.86□□□□□ -0.67
NUP54-216ENST00000514901 IGHV3-35A0A0C4DH35 117 aa10.85□□□□□ -0.67
NUP54-216ENST00000514901 K7EMT4 169 aa10.85□□□□□ -0.67
NUP54-216ENST00000514901 CCSO14618 274 aa10.85□□□□□ -0.67
NUP54-216ENST00000514901 SSSCA1O60232 199 aa10.85□□□□□ -0.67
NUP54-216ENST00000514901 SCGB1D2O95969 90 aa10.85□□□□□ -0.67
NUP54-216ENST00000514901 FOLR2P14207 255 aa10.85□□□□□ -0.67
NUP54-216ENST00000514901 SPANXN5Q5MJ07 72 aa10.85□□□□□ -0.67
NUP54-216ENST00000514901 C11orf87Q6NUJ2 197 aa10.85□□□□□ -0.67
NUP54-216ENST00000514901 ZNF600Q6ZNG1 722 aa10.85□□□□□ -0.67
NUP54-216ENST00000514901 OR2K2Q8NGT1 345 aa10.85□□□□□ -0.67
NUP54-216ENST00000514901 PSENENQ9NZ42 101 aa10.85□□□□□ -0.67
NUP54-216ENST00000514901 PAIP2BQ9ULR5 123 aaKnown RBP10.85□□□□□ -0.67
NUP54-216ENST00000514901 TMEM213A2RRL7 107 aa10.84□□□□□ -0.67
NUP54-216ENST00000514901 MBPP02686 304 aaPredicted RBP10.84□□□□□ -0.67
NUP54-216ENST00000514901 SPNP16150 400 aa10.84□□□□□ -0.67
NUP54-216ENST00000514901 CBLN1P23435 193 aa10.84□□□□□ -0.67
NUP54-216ENST00000514901 RND2P52198 227 aa10.84□□□□□ -0.67
NUP54-216ENST00000514901 CYCSP99999 105 aaKnown RBP10.84□□□□□ -0.67
NUP54-216ENST00000514901 UNQ9165/PRO28630Q6UXU0 137 aa10.84□□□□□ -0.67
NUP54-216ENST00000514901 SLC16A13Q7RTY0 426 aa10.84□□□□□ -0.67
NUP54-216ENST00000514901 OR1S2Q8NGQ3 325 aa10.84□□□□□ -0.67
NUP54-216ENST00000514901 SLC35E1Q96K37 410 aa10.84□□□□□ -0.67
NUP54-216ENST00000514901 DAZ1Q9NQZ3 744 aaKnown RBP10.84□□□□□ -0.67
NUP54-216ENST00000514901 AURKAIP1Q9NWT8 199 aaPredicted RBP10.84□□□□□ -0.67
NUP54-216ENST00000514901 MRPL27Q9P0M9 148 aaKnown RBP10.84□□□□□ -0.67
NUP54-216ENST00000514901 ZNF256Q9Y2P7 627 aaPredicted RBP10.84□□□□□ -0.67
NUP54-216ENST00000514901 L7N2F9 121 aa10.83□□□□□ -0.68
NUP54-216ENST00000514901 SSNA1O43805 119 aa10.83□□□□□ -0.68
NUP54-216ENST00000514901 TSC22D2O75157 780 aa10.83□□□□□ -0.68
NUP54-216ENST00000514901 YIF1AO95070 293 aa10.83□□□□□ -0.68
NUP54-216ENST00000514901 C8orf88P0DMB2 117 aa10.83□□□□□ -0.68
NUP54-216ENST00000514901 PVALBP20472 110 aaPredicted RBP10.83□□□□□ -0.68
NUP54-216ENST00000514901 OR10J1P30954 320 aa10.83□□□□□ -0.68
NUP54-216ENST00000514901 VAMP2P63027 116 aa10.83□□□□□ -0.68
NUP54-216ENST00000514901 RGS21Q2M5E4 152 aa10.83□□□□□ -0.68
NUP54-216ENST00000514901 TM4SF20Q53R12 229 aa10.83□□□□□ -0.68
NUP54-216ENST00000514901 LCN12Q6JVE5 192 aa10.83□□□□□ -0.68
NUP54-216ENST00000514901 DYNLRB2Q8TF09 96 aa10.83□□□□□ -0.68
NUP54-216ENST00000514901 NPIPB3Q92617 1050 aa10.83□□□□□ -0.68
NUP54-216ENST00000514901 C20orf24Q9BUV8 137 aa10.83□□□□□ -0.68
NUP54-216ENST00000514901 MRPL36Q9P0J6 103 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 173.2 ms