RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 C21orf62Q9NYP8 219 aa15.58■□□□□ 0.08
USP53-208ENST00000514305 PEF1Q9UBV8 284 aaKnown RBP15.58■□□□□ 0.08
USP53-208ENST00000514305 RCL1Q9Y2P8 373 aaKnown RBP15.58■□□□□ 0.08
USP53-208ENST00000514305 MT-CO2P00403 227 aa15.57■□□□□ 0.08
USP53-208ENST00000514305 IGHV3-11P01762 117 aa15.57■□□□□ 0.08
USP53-208ENST00000514305 SLC25A4P12235 298 aa15.57■□□□□ 0.08
USP53-208ENST00000514305 ZP3P21754 424 aa15.57■□□□□ 0.08
USP53-208ENST00000514305 BCAP31P51572 246 aa15.57■□□□□ 0.08
USP53-208ENST00000514305 IL15RAQ13261 267 aa15.57■□□□□ 0.08
USP53-208ENST00000514305 RAB32Q13637 225 aa15.57■□□□□ 0.08
USP53-208ENST00000514305 FCN2Q15485 313 aa15.57■□□□□ 0.08
USP53-208ENST00000514305 GNB4Q9HAV0 340 aa15.57■□□□□ 0.08
USP53-208ENST00000514305 I3L521 148 aa15.56■□□□□ 0.08
USP53-208ENST00000514305 GPX4P36969 197 aaPredicted RBP15.56■□□□□ 0.08
USP53-208ENST00000514305 H2BFSP57053 126 aa15.56■□□□□ 0.08
USP53-208ENST00000514305 ETV3LQ6ZN32 361 aa15.56■□□□□ 0.08
USP53-208ENST00000514305 C19orf35Q6ZS72 473 aa15.56■□□□□ 0.08
USP53-208ENST00000514305 C8orf86Q6ZUL3 223 aa15.56■□□□□ 0.08
USP53-208ENST00000514305 OR1N2Q8NGR9 330 aa15.56■□□□□ 0.08
USP53-208ENST00000514305 CACNG8Q8WXS5 425 aa15.56■□□□□ 0.08
USP53-208ENST00000514305 OR5B12Q96R08 314 aa15.56■□□□□ 0.08
USP53-208ENST00000514305 DNAH3Q8TD57 4116 aa15.55■□□□□ 0.08
USP53-208ENST00000514305 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.55■□□□□ 0.08
USP53-208ENST00000514305 E5RGE8 158 aa15.55■□□□□ 0.08
USP53-208ENST00000514305 LINC01619G3V211 115 aa15.55■□□□□ 0.08
USP53-208ENST00000514305 CCL24O00175 119 aa15.55■□□□□ 0.08
USP53-208ENST00000514305 GIPP09681 153 aaPredicted RBP15.55■□□□□ 0.08
USP53-208ENST00000514305 MFAP2P55001 183 aa15.55■□□□□ 0.08
USP53-208ENST00000514305 RAP2BP61225 183 aa15.55■□□□□ 0.08
USP53-208ENST00000514305 ZNF616Q08AN1 781 aa15.55■□□□□ 0.08
USP53-208ENST00000514305 Q56UQ5 140 aa15.55■□□□□ 0.08
USP53-208ENST00000514305 ACSM6Q6P461 480 aa15.55■□□□□ 0.08
USP53-208ENST00000514305 SPSB3Q6PJ21 355 aa15.55■□□□□ 0.08
USP53-208ENST00000514305 OR11H1Q8NG94 326 aa15.55■□□□□ 0.08
USP53-208ENST00000514305 SCARB1Q8WTV0 552 aa15.55■□□□□ 0.08
USP53-208ENST00000514305 PPP1R1CQ8WVI7 109 aa15.55■□□□□ 0.08
USP53-208ENST00000514305 DCUN1D4Q92564 292 aa15.55■□□□□ 0.08
USP53-208ENST00000514305 ZNF436Q9C0F3 470 aaPredicted RBP15.55■□□□□ 0.08
USP53-208ENST00000514305 I3L2K1 104 aa15.54■□□□□ 0.08
USP53-208ENST00000514305 K7EIM0 57 aa15.54■□□□□ 0.08
USP53-208ENST00000514305 DEDDO75618 318 aa15.54■□□□□ 0.08
USP53-208ENST00000514305 FCGR2BP31994 310 aaPredicted RBP15.54■□□□□ 0.08
USP53-208ENST00000514305 CAV2P51636 162 aa15.54■□□□□ 0.08
USP53-208ENST00000514305 LRRC37A5PQ49AS3 106 aa15.54■□□□□ 0.08
USP53-208ENST00000514305 Q6ZNX1 250 aa15.54■□□□□ 0.08
USP53-208ENST00000514305 OR10P1Q8NGE3 313 aa15.54■□□□□ 0.08
USP53-208ENST00000514305 THAP6Q8TBB0 222 aa15.54■□□□□ 0.08
USP53-208ENST00000514305 ZNF502Q8TBZ5 544 aa15.54■□□□□ 0.08
USP53-208ENST00000514305 BSCL2Q96G97 398 aaPredicted RBP15.54■□□□□ 0.08
USP53-208ENST00000514305 GPR61Q9BZJ8 451 aa15.54■□□□□ 0.08
USP53-208ENST00000514305 SLC25A31Q9H0C2 315 aa15.54■□□□□ 0.08
USP53-208ENST00000514305 DMRT1Q9Y5R6 373 aa15.54■□□□□ 0.08
USP53-208ENST00000514305 TRAV30A0A087WSZ9 112 aa15.53■□□□□ 0.08
USP53-208ENST00000514305 ANKRD34BA5PLL1 514 aa15.53■□□□□ 0.08
USP53-208ENST00000514305 NUPL2O15504 423 aaKnown RBP15.53■□□□□ 0.08
USP53-208ENST00000514305 GNG7O60262 68 aa15.53■□□□□ 0.08
USP53-208ENST00000514305 GGCTO75223 188 aaKnown RBP15.53■□□□□ 0.08
USP53-208ENST00000514305 CXCL3P19876 107 aa15.53■□□□□ 0.08
USP53-208ENST00000514305 CLEC19AQ6UXS0 136 aa15.53■□□□□ 0.08
USP53-208ENST00000514305 STX12Q86Y82 276 aa15.53■□□□□ 0.08
USP53-208ENST00000514305 OR11H7Q8NGC8 314 aa15.53■□□□□ 0.08
USP53-208ENST00000514305 SLC35E1Q96K37 410 aa15.53■□□□□ 0.08
USP53-208ENST00000514305 MFSD2BA6NFX1 497 aa15.52■□□□□ 0.08
USP53-208ENST00000514305 C15orf62A8K5M9 175 aa15.52■□□□□ 0.08
USP53-208ENST00000514305 H3BP45 60 aa15.52■□□□□ 0.08
USP53-208ENST00000514305 MPC2O95563 127 aa15.52■□□□□ 0.08
USP53-208ENST00000514305 CLEC3BP05452 202 aa15.52■□□□□ 0.08
USP53-208ENST00000514305 ARL3P36405 182 aa15.52■□□□□ 0.08
USP53-208ENST00000514305 CD69Q07108 199 aa15.52■□□□□ 0.08
USP53-208ENST00000514305 RPEL1Q2QD12 228 aa15.52■□□□□ 0.08
USP53-208ENST00000514305 UBAC2Q8NBM4 344 aa15.52■□□□□ 0.08
USP53-208ENST00000514305 NUP62P37198 522 aaPredicted RBP15.51■□□□□ 0.07
USP53-208ENST00000514305 P2RY1P47900 373 aa15.51■□□□□ 0.07
USP53-208ENST00000514305 PAX9P55771 341 aa15.51■□□□□ 0.07
USP53-208ENST00000514305 HBG1P69891 147 aa15.51■□□□□ 0.07
USP53-208ENST00000514305 HBG2P69892 147 aa15.51■□□□□ 0.07
USP53-208ENST00000514305 DEFA5Q01523 94 aa15.51■□□□□ 0.07
USP53-208ENST00000514305 PRSS54Q6PEW0 395 aa15.51■□□□□ 0.07
USP53-208ENST00000514305 TMEM14EPQ6UXP3 125 aa15.51■□□□□ 0.07
USP53-208ENST00000514305 LINC00482Q8N8I6 264 aa15.51■□□□□ 0.07
USP53-208ENST00000514305 OR4X1Q8NH49 305 aa15.51■□□□□ 0.07
USP53-208ENST00000514305 LYRM2Q9NU23 88 aaPredicted RBP15.51■□□□□ 0.07
USP53-208ENST00000514305 IGHV3-21A0A0B4J1V1 117 aa15.5■□□□□ 0.07
USP53-208ENST00000514305 TGOLN2O43493 480 aa15.5■□□□□ 0.07
USP53-208ENST00000514305 IGHV3-23P01764 117 aa15.5■□□□□ 0.07
USP53-208ENST00000514305 GPR183P32249 361 aa15.5■□□□□ 0.07
USP53-208ENST00000514305 RELQ04864 619 aaPredicted RBP15.5■□□□□ 0.07
USP53-208ENST00000514305 FAM106AQ4KMX7 169 aa15.5■□□□□ 0.07
USP53-208ENST00000514305 C18orf65Q6ZTR6 163 aa15.5■□□□□ 0.07
USP53-208ENST00000514305 SLC16A13Q7RTY0 426 aa15.5■□□□□ 0.07
USP53-208ENST00000514305 RAX2Q96IS3 184 aa15.5■□□□□ 0.07
USP53-208ENST00000514305 OR4C12Q96R67 309 aa15.5■□□□□ 0.07
USP53-208ENST00000514305 GGACTQ9BVM4 153 aa15.5■□□□□ 0.07
USP53-208ENST00000514305 K7EIL1 84 aa15.49■□□□□ 0.07
USP53-208ENST00000514305 CLN5O75503 358 aa15.49■□□□□ 0.07
USP53-208ENST00000514305 FABP1P07148 127 aa15.49■□□□□ 0.07
USP53-208ENST00000514305 METTL15P1P0C7V9 234 aa15.49■□□□□ 0.07
USP53-208ENST00000514305 DEFB121Q5J5C9 76 aa15.49■□□□□ 0.07
USP53-208ENST00000514305 OR8G2PQ6IF36 304 aa15.49■□□□□ 0.07
USP53-208ENST00000514305 TMEM116Q8NCL8 245 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms