RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 C19orf35Q6ZS72 473 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 TMEM116Q8NCL8 245 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 OR4F5Q8NH21 305 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 OR4F4Q96R69 305 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 TXNDC17Q9BRA2 123 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 DMRT1Q9Y5R6 373 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 C11orf94C9JXX5 98 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 TSPAN9O75954 239 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 COX6B1P14854 86 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 CTRB1P17538 263 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 GCHFRP30047 84 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 SAA4P35542 130 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 SELENOTP62341 195 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 CTRB2Q6GPI1 263 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 MIR17HGQ75NE6 70 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 SLC25A33Q9BSK2 321 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 SPG11Q96JI7 2443 aa11.87□□□□□ -0.51
VCAN-211ENST00000513984 IGHV4-30-2A0A087WSY4 118 aa11.87□□□□□ -0.51
VCAN-211ENST00000513984 A0A087WWC5 75 aa11.87□□□□□ -0.51
VCAN-211ENST00000513984 IGHV3-48P01763 117 aa11.87□□□□□ -0.51
VCAN-211ENST00000513984 TMEM11P17152 192 aa11.87□□□□□ -0.51
VCAN-211ENST00000513984 FXYD3Q14802 87 aa11.87□□□□□ -0.51
VCAN-211ENST00000513984 C15orf54Q8N8G6 183 aa11.87□□□□□ -0.51
VCAN-211ENST00000513984 C22orf15Q8WYQ4 148 aa11.87□□□□□ -0.51
VCAN-211ENST00000513984 RNF2Q99496 336 aa11.87□□□□□ -0.51
VCAN-211ENST00000513984 MRPL32Q9BYC8 188 aaKnown RBP11.87□□□□□ -0.51
VCAN-211ENST00000513984 SDF2L1Q9HCN8 221 aa11.87□□□□□ -0.51
VCAN-211ENST00000513984 CENPVL3A0A0U1RRI6 287 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 COLCA2A8K830 154 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 ZNF727A8MUV8 499 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 B4DEV8 164 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 NPFFO15130 113 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 PDE6DO43924 150 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 RUSC1-AS1Q66K80 236 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 ZNF562Q6V9R5 426 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 TMEM37Q8WXS4 190 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 PERPQ96FX8 193 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 TRGV9Q99603 122 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 SMIM7Q9BQ49 75 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 TECRQ9NZ01 308 aaKnown RBP11.86□□□□□ -0.51
VCAN-211ENST00000513984 CLN5O75503 358 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 FAM106CPP0CH98 169 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 ATF4P18848 351 aaPredicted RBP11.86□□□□□ -0.51
VCAN-211ENST00000513984 BRS3P32247 399 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 ATP5G3P48201 142 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 DSCR9P59020 149 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 UBE2G2P60604 165 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 ZNF90Q03938 601 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 OR1L6Q8NGR2 347 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 WNT10AQ9GZT5 417 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 PARLQ9H300 379 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 ARL2-SNX15V9GYD0 113 aa11.86□□□□□ -0.51
VCAN-211ENST00000513984 FAM208BQ5VWN6 2430 aa11.85□□□□□ -0.51
VCAN-211ENST00000513984 F6UZH7 168 aa11.85□□□□□ -0.51
VCAN-211ENST00000513984 I3L2K1 104 aa11.85□□□□□ -0.51
VCAN-211ENST00000513984 TAS2R45P59539 299 aa11.85□□□□□ -0.51
VCAN-211ENST00000513984 PQLC2Q6ZP29 291 aa11.85□□□□□ -0.51
VCAN-211ENST00000513984 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
VCAN-211ENST00000513984 OR1L4Q8NGR5 311 aa11.85□□□□□ -0.51
VCAN-211ENST00000513984 PFDN5Q99471 154 aa11.85□□□□□ -0.51
VCAN-211ENST00000513984 DNAJC4Q9NNZ3 241 aa11.85□□□□□ -0.51
VCAN-211ENST00000513984 TNFRSF19Q9NS68 423 aa11.85□□□□□ -0.51
VCAN-211ENST00000513984 NAT8Q9UHE5 227 aa11.85□□□□□ -0.51
VCAN-211ENST00000513984 ABCA1O95477 2261 aa11.85□□□□□ -0.51
VCAN-211ENST00000513984 NCBP2LA6PVI3 153 aaKnown RBP11.84□□□□□ -0.51
VCAN-211ENST00000513984 CX3CL1P78423 397 aa11.84□□□□□ -0.51
VCAN-211ENST00000513984 CST9LP1Q5W188 147 aa11.84□□□□□ -0.51
VCAN-211ENST00000513984 NRGNQ92686 78 aa11.84□□□□□ -0.51
VCAN-211ENST00000513984 ARPC1AQ92747 370 aa11.84□□□□□ -0.51
VCAN-211ENST00000513984 RPUSD4Q96CM3 377 aaKnown RBP11.84□□□□□ -0.51
VCAN-211ENST00000513984 ZNF503Q96F45 646 aa11.84□□□□□ -0.51
VCAN-211ENST00000513984 C1RLQ9NZP8 487 aa11.84□□□□□ -0.51
VCAN-211ENST00000513984 NPIPB5A8MRT5 1133 aa11.83□□□□□ -0.51
VCAN-211ENST00000513984 C8orf88P0DMB2 117 aa11.83□□□□□ -0.51
VCAN-211ENST00000513984 NPPCP23582 126 aa11.83□□□□□ -0.51
VCAN-211ENST00000513984 BPIFB3P59826 476 aa11.83□□□□□ -0.51
VCAN-211ENST00000513984 NDPQ00604 133 aa11.83□□□□□ -0.51
VCAN-211ENST00000513984 FAM120AOSQ5T036 256 aa11.83□□□□□ -0.51
VCAN-211ENST00000513984 Q8N9W7 124 aa11.83□□□□□ -0.51
VCAN-211ENST00000513984 ISOC2Q96AB3 205 aa11.83□□□□□ -0.51
VCAN-211ENST00000513984 FAM103A1Q9BTL3 118 aaKnown RBP11.83□□□□□ -0.51
VCAN-211ENST00000513984 TMEM167BQ9NRX6 74 aa11.83□□□□□ -0.51
VCAN-211ENST00000513984 YTHDF2Q9Y5A9 579 aaKnown RBP11.83□□□□□ -0.51
VCAN-211ENST00000513984 LRRK2Q5S007 2527 aa11.83□□□□□ -0.52
VCAN-211ENST00000513984 LOC105371267A0A1B0GV96 52 aa11.83□□□□□ -0.52
VCAN-211ENST00000513984 A1L4Q6 167 aa11.83□□□□□ -0.52
VCAN-211ENST00000513984 COX7A2P2O60397 106 aa11.83□□□□□ -0.52
VCAN-211ENST00000513984 TMEM241Q24JQ0 296 aa11.83□□□□□ -0.52
VCAN-211ENST00000513984 ZNF674Q2M3X9 581 aa11.83□□□□□ -0.52
VCAN-211ENST00000513984 ASPHD1Q5U4P2 390 aa11.83□□□□□ -0.52
VCAN-211ENST00000513984 PATE2Q6UY27 113 aa11.83□□□□□ -0.52
VCAN-211ENST00000513984 OR4X1Q8NH49 305 aa11.83□□□□□ -0.52
VCAN-211ENST00000513984 HIST1H2BAQ96A08 127 aa11.83□□□□□ -0.52
VCAN-211ENST00000513984 UTP20O75691 2785 aaKnown RBP11.82□□□□□ -0.52
VCAN-211ENST00000513984 IGHV3-21A0A0B4J1V1 117 aa11.82□□□□□ -0.52
VCAN-211ENST00000513984 IGHV1-69DA0A0B4J2H0 117 aa11.82□□□□□ -0.52
VCAN-211ENST00000513984 K7EIM0 57 aa11.82□□□□□ -0.52
VCAN-211ENST00000513984 OR2C1O95371 312 aa11.82□□□□□ -0.52
VCAN-211ENST00000513984 IGHV1-69P01742 117 aa11.82□□□□□ -0.52
VCAN-211ENST00000513984 HLA-DRB1P01911 266 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms