RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 OR4C12Q96R67 309 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 FNDC4Q9H6D8 234 aaPredicted RBP7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 MGAT4CQ9UBM8 478 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 PEF1Q9UBV8 284 aaKnown RBP7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 RCL1Q9Y2P8 373 aaKnown RBP7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 LSM5Q9Y4Y9 91 aaKnown RBP7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 DNAH3Q8TD57 4116 aa7.54□□□□□ -1.2
TOPBP1-209ENST00000513818 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 OR2T8A6NH00 312 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 C15orf62A8K5M9 175 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 FAM90A26D6RGX4 464 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 F8W735 103 aaPredicted RBP7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 K7EPK0 472 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 CCNKO75909 580 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 TMEM50AO95807 157 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 MBPP02686 304 aaPredicted RBP7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 HSPB1P04792 205 aaKnown RBP7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 EDN2P20800 178 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 OPRK1P41145 380 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 S100A10P60903 97 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 KLK9Q2XQG4 91 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 LRRC37A5PQ49AS3 106 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 Q56UQ5 140 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 GSG1LQ6UXU4 331 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 DCUN1D4Q92564 292 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 DLX4Q92988 240 aaPredicted RBP7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 C2orf50Q96LR7 162 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 HIPK2Q9H2X6 1198 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 ZMAT4Q9H898 229 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 C21orf62Q9NYP8 219 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 THYN1Q9P016 225 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 KLK9Q9UKQ9 250 aa7.53□□□□□ -1.2
TOPBP1-209ENST00000513818 CYB5BO43169 146 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 MED6O75586 246 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 OR2C1O95371 312 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 IGLL1P15814 213 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 ARL3P36405 182 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 SUB1P53999 127 aaKnown RBP eCLIP7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 H2BFSP57053 126 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 SYNJ2BPP57105 145 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 RAB32Q13637 225 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 FCN2Q15485 313 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 C2orf83Q53S99 150 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 SPANXN5Q5MJ07 72 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 PVRIGQ6DKI7 326 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 ACSM6Q6P461 480 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 C1QL4Q86Z23 238 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 OR1L6Q8NGR2 347 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 VN1R17PQ8TDU5 208 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 CXorf58Q96LI9 332 aa7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 RANGRFQ9HD47 186 aaPredicted RBP7.52□□□□□ -1.21
TOPBP1-209ENST00000513818 IGHV3OR16-8A0A075B7F1 116 aa7.51□□□□□ -1.21
TOPBP1-209ENST00000513818 G3V4G9 280 aa7.51□□□□□ -1.21
TOPBP1-209ENST00000513818 TGOLN2O43493 480 aa7.51□□□□□ -1.21
TOPBP1-209ENST00000513818 IFNA4P05014 189 aa7.51□□□□□ -1.21
TOPBP1-209ENST00000513818 CLEC3BP05452 202 aa7.51□□□□□ -1.21
TOPBP1-209ENST00000513818 OR8U8P0C7N1 319 aa7.51□□□□□ -1.21
TOPBP1-209ENST00000513818 CXCL3P19876 107 aa7.51□□□□□ -1.21
TOPBP1-209ENST00000513818 PAX9P55771 341 aa7.51□□□□□ -1.21
TOPBP1-209ENST00000513818 RPEL1Q2QD12 228 aa7.51□□□□□ -1.21
TOPBP1-209ENST00000513818 SLC16A13Q7RTY0 426 aa7.51□□□□□ -1.21
TOPBP1-209ENST00000513818 HAPLN4Q86UW8 402 aa7.51□□□□□ -1.21
TOPBP1-209ENST00000513818 OR11H7Q8NGC8 314 aa7.51□□□□□ -1.21
TOPBP1-209ENST00000513818 CHRDL1Q9BU40 450 aa7.51□□□□□ -1.21
TOPBP1-209ENST00000513818 PSENENQ9NZ42 101 aa7.51□□□□□ -1.21
TOPBP1-209ENST00000513818 SELENOKQ9Y6D0 94 aa7.51□□□□□ -1.21
TOPBP1-209ENST00000513818 TRBV7-1A0A0A6YYK4 115 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 ZNF561-AS1K7EIQ3 104 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 CORTO00230 105 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 OVOL1O14753 267 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 METTL15P1P0C7V9 234 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 ADMP35318 185 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 RND2P52198 227 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 MFAP4P55083 255 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 UNQ9165/PRO28630Q6UXU0 137 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 CACNG8Q8WXS5 425 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 ACY3Q96HD9 319 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 ZNF414Q96IQ9 312 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 CIB3Q96Q77 187 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 MED28Q9H204 178 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 C11orf1Q9H5F2 150 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 OR5AC2Q9NZP5 309 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 CACFD1Q9UGQ2 172 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 STRAPQ9Y3F4 350 aaKnown RBP7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 U3KQ87 197 aa7.5□□□□□ -1.21
TOPBP1-209ENST00000513818 MGAM2Q2M2H8 2515 aa7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 NBEAL1Q6ZS30 2694 aa7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 SEC14L6B5MCN3 397 aa7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 L7N2F9 121 aa7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 GNG7O60262 68 aa7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 GGCTO75223 188 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 ZP3P21754 424 aa7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 BCAP31P51572 246 aa7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 RRAS2P62070 204 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 RAB11AP62491 216 aa7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 VAMP2P63027 116 aa7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 CD69Q07108 199 aa7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 IL15RAQ13261 267 aa7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 CT83Q5H943 113 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms