RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 PINX1Q96BK5 328 aaKnown RBP6.95□□□□□ -1.3
TCOF1-212ENST00000513538 SEC22AQ96IW7 307 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 TMEM56Q96MV1 263 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 ABHD1Q96SE0 405 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 TXN2Q99757 166 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 MIXL1Q9H2W2 232 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 CLEC5AQ9NY25 188 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 MRPL36Q9P0J6 103 aaKnown RBP6.95□□□□□ -1.3
TCOF1-212ENST00000513538 TRAV2A0A0B4J234 112 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 K7EQG2 157 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 M0R2N4 97 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 DNASE2O00115 360 aaPredicted RBP6.94□□□□□ -1.3
TCOF1-212ENST00000513538 GNG7O60262 68 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 AMBPP02760 352 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 MIFP14174 115 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 RCVRNP35243 200 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 PAFAH1B2P68402 229 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 PRCDQ00LT1 54 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 IZUMO4Q1ZYL8 232 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 C12orf74Q32Q52 190 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 PHLDA2Q53GA4 152 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 SPINK9Q5DT21 86 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 PVRIGQ6DKI7 326 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 LPCAT3Q6P1A2 487 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 MZT2AQ6P582 158 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 STHQ8IWL8 128 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 GINS3Q9BRX5 216 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 RNF126Q9BV68 326 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 MRPS26Q9BYN8 205 aaKnown RBP6.94□□□□□ -1.3
TCOF1-212ENST00000513538 FKBP11Q9NYL4 201 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 KLK11Q9UBX7 282 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 MTFP1Q9UDX5 166 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 RABAC1Q9UI14 185 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 PUS1Q9Y606 427 aaKnown RBP eCLIP6.94□□□□□ -1.3
TCOF1-212ENST00000513538 DNAH11Q96DT5 4516 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 NACAE9PAV3 2078 aa6.94□□□□□ -1.3
TCOF1-212ENST00000513538 CD5P06127 495 aa6.93□□□□□ -1.3
TCOF1-212ENST00000513538 ZNF688P0C7X2 276 aa6.93□□□□□ -1.3
TCOF1-212ENST00000513538 PPP5CP53041 499 aa6.93□□□□□ -1.3
TCOF1-212ENST00000513538 RPL11P62913 178 aaKnown RBP6.93□□□□□ -1.3
TCOF1-212ENST00000513538 SPCS2Q15005 226 aa6.93□□□□□ -1.3
TCOF1-212ENST00000513538 TBC1D26Q86UD7 250 aa6.93□□□□□ -1.3
TCOF1-212ENST00000513538 CMTM1Q8IZ96 169 aa6.93□□□□□ -1.3
TCOF1-212ENST00000513538 POM121L12Q8N7R1 296 aa6.93□□□□□ -1.3
TCOF1-212ENST00000513538 STXBP6Q8NFX7 210 aa6.93□□□□□ -1.3
TCOF1-212ENST00000513538 OR52I2Q8NH67 350 aa6.93□□□□□ -1.3
TCOF1-212ENST00000513538 DCANP1Q8TF63 244 aa6.93□□□□□ -1.3
TCOF1-212ENST00000513538 AP3S1Q92572 193 aa6.93□□□□□ -1.3
TCOF1-212ENST00000513538 EXTL2Q9UBQ6 330 aa6.93□□□□□ -1.3
TCOF1-212ENST00000513538 DEFB131BA0A096LNP1 70 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 M0QYG6 137 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 CTDSP2O14595 271 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 TMEM50AO95807 157 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 CD74P04233 296 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 P0C879 139 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 SPP1P10451 314 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 RND3P61587 244 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 HSPE1P61604 102 aaKnown RBP6.92□□□□□ -1.3
TCOF1-212ENST00000513538 TSPAN5P62079 268 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 ACTL10Q5JWF8 245 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 ZNF600Q6ZNG1 722 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 ZNF575Q86XF7 245 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 DUSP18Q8NEJ0 188 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 DYNC2LI1Q8TCX1 351 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 MRGPRFQ96AM1 343 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 GRAMD2BQ96HH9 432 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 TSC22D3Q99576 134 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 FNDC4Q9H6D8 234 aaPredicted RBP6.92□□□□□ -1.3
TCOF1-212ENST00000513538 PGPEP1Q9NXJ5 209 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 TBC1D24Q9ULP9 559 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 PKD1P98161 4303 aa6.92□□□□□ -1.3
TCOF1-212ENST00000513538 ABCA13Q86UQ4 5058 aa6.91□□□□□ -1.3
TCOF1-212ENST00000513538 FAM25AB3EWG3 89 aa6.91□□□□□ -1.3
TCOF1-212ENST00000513538 FAM25CB3EWG5 89 aa6.91□□□□□ -1.3
TCOF1-212ENST00000513538 FAM25GB3EWG6 89 aa6.91□□□□□ -1.3
TCOF1-212ENST00000513538 CD3DP04234 171 aa6.91□□□□□ -1.3
TCOF1-212ENST00000513538 CRYBB3P26998 211 aa6.91□□□□□ -1.3
TCOF1-212ENST00000513538 P2RY1P47900 373 aa6.91□□□□□ -1.3
TCOF1-212ENST00000513538 MLANAQ16655 118 aa6.91□□□□□ -1.3
TCOF1-212ENST00000513538 MORN3Q6PF18 240 aaPredicted RBP6.91□□□□□ -1.3
TCOF1-212ENST00000513538 Q6ZR54 194 aa6.91□□□□□ -1.3
TCOF1-212ENST00000513538 H2BFWTQ7Z2G1 175 aa6.91□□□□□ -1.3
TCOF1-212ENST00000513538 GPR141Q7Z602 305 aa6.91□□□□□ -1.3
TCOF1-212ENST00000513538 ARRDC1Q8N5I2 433 aa6.91□□□□□ -1.3
TCOF1-212ENST00000513538 TMEM229BQ8NBD8 167 aa6.91□□□□□ -1.3
TCOF1-212ENST00000513538 OR4D10Q8NGI6 311 aa6.91□□□□□ -1.3
TCOF1-212ENST00000513538 OR4A16Q8NH70 328 aa6.91□□□□□ -1.3
TCOF1-212ENST00000513538 ZNF486Q96H40 463 aaPredicted RBP6.91□□□□□ -1.3
TCOF1-212ENST00000513538 GABARAPH6UMI1 98 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 IGKV1-5P01602 117 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 P0DMU3 169 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 FAM231AP0DMU4 169 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 FAM231CP0DMU5 169 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 RNASE2P10153 161 aaKnown RBP6.9□□□□□ -1.3
TCOF1-212ENST00000513538 TBPP20226 339 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 NPPCP23582 126 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 S100GP29377 79 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 NPBWR1P48145 328 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 TMBIM6P55061 237 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 SSBP1Q04837 148 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms