RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 IFNA4P05014 189 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 GIPP09681 153 aaPredicted RBP5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 OR8U8P0C7N1 319 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 FCGR2BP31994 310 aaPredicted RBP5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 PAX9P55771 341 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 ZNF616Q08AN1 781 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 DEFB136Q30KP8 78 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 LRRC37A5PQ49AS3 106 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 SPANXN5Q5MJ07 72 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 ETFRF1Q6IPR1 90 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 C18orf65Q6ZTR6 163 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 SCARB1Q8WTV0 552 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 TMEM170AQ8WVE7 144 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 CCDC140Q96MF4 163 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 OR5B12Q96R08 314 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 ZNF436Q9C0F3 470 aaPredicted RBP5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 C11orf1Q9H5F2 150 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 GAR1Q9NY12 217 aaKnown RBP5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 C21orf62Q9NYP8 219 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 PEF1Q9UBV8 284 aaKnown RBP5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 ANK2Q01484 3957 aa5.86□□□□□ -1.47
HMGXB3-204ENST00000513318 SORL1Q92673 2214 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 IGHV4OR15-8A0A075B7B6 117 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 A0A087WW49 117 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 IGHV3-21A0A0B4J1V1 117 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 ANKRD34BA5PLL1 514 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 E5RGE8 158 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 LINC01619G3V211 115 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 CCL24O00175 119 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 SCGB2A1O75556 95 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 MPC2O95563 127 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 TMEM50AO95807 157 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 TSPAN15O95858 294 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 HSPB1P04792 205 aaKnown RBP5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 SLC25A4P12235 298 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 ZP3P21754 424 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 GPR183P32249 361 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 MYCNOSP40205 109 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 NPBWR1P48145 328 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 MFAP4P55083 255 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 RAP2BP61225 183 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 CD69Q07108 199 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 FHL3Q13643 280 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 SPSB3Q6PJ21 355 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 TMEM14EPQ6UXP3 125 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 ETV3LQ6ZN32 361 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 REC114Q7Z4M0 266 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 OR11H1Q8NG94 326 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 ZNF502Q8TBZ5 544 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 DPF1Q92782 380 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 BSCL2Q96G97 398 aaPredicted RBP5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 RAX2Q96IS3 184 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 OR4C12Q96R67 309 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 TXN2Q99757 166 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 FNDC4Q9H6D8 234 aaPredicted RBP5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 RANGRFQ9HD47 186 aaPredicted RBP5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 LYRM2Q9NU23 88 aaPredicted RBP5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 PAIP2BQ9ULR5 123 aaKnown RBP5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 S4R3C0 116 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 U3KQE9 123 aa5.85□□□□□ -1.47
HMGXB3-204ENST00000513318 NOTCH3Q9UM47 2321 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 A0A1B0GVG6 124 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 PMS2P5A8MQ11 134 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 PRSS46E5RG02 174 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 H0YIZ8 118 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 TGOLN2O43493 480 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 GNG7O60262 68 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 TRBV12-3P01733 135 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 IGHV3-23P01764 117 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 METTL15P1P0C7V9 234 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 ARL3P36405 182 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 P2RY1P47900 373 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 BCAP31P51572 246 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 CAV2P51636 162 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 FGL1Q08830 312 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 Q56UQ5 140 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 ACSM6Q6P461 480 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 PRSS54Q6PEW0 395 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 CLEC19AQ6UXS0 136 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 SLC16A13Q7RTY0 426 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 STX12Q86Y82 276 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 UBAC2Q8NBM4 344 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 OR10P1Q8NGE3 313 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 OR1N2Q8NGR9 330 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 OR4X1Q8NH49 305 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 THAP6Q8TBB0 222 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 CACNG8Q8WXS5 425 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 DCUN1D4Q92564 292 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 SLC35E1Q96K37 410 aa5.84□□□□□ -1.47
HMGXB3-204ENST00000513318 TRAV30A0A087WSZ9 112 aa5.83□□□□□ -1.48
HMGXB3-204ENST00000513318 FAM24AA6NFZ4 105 aa5.83□□□□□ -1.48
HMGXB3-204ENST00000513318 OR2T8A6NH00 312 aa5.83□□□□□ -1.48
HMGXB3-204ENST00000513318 PPP5D1E7EU14 171 aa5.83□□□□□ -1.48
HMGXB3-204ENST00000513318 FNDC10F2Z333 226 aa5.83□□□□□ -1.48
HMGXB3-204ENST00000513318 BMPR1BO00238 502 aa5.83□□□□□ -1.48
HMGXB3-204ENST00000513318 NUPL2O15504 423 aaKnown RBP5.83□□□□□ -1.48
HMGXB3-204ENST00000513318 GGCTO75223 188 aaKnown RBP5.83□□□□□ -1.48
HMGXB3-204ENST00000513318 CLN5O75503 358 aa5.83□□□□□ -1.48
HMGXB3-204ENST00000513318 IGHV3-48P01763 117 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms