RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 GNG7O60262 68 aa13.28□□□□□ -0.28
DDR1-270ENST00000513043 PTTG1O95997 202 aa13.28□□□□□ -0.28
DDR1-270ENST00000513043 IFNA4P05014 189 aa13.28□□□□□ -0.28
DDR1-270ENST00000513043 ADMP35318 185 aa13.28□□□□□ -0.28
DDR1-270ENST00000513043 KRTAP10-11P60412 298 aa13.28□□□□□ -0.28
DDR1-270ENST00000513043 DEFA6Q01524 100 aa13.28□□□□□ -0.28
DDR1-270ENST00000513043 NOXA1Q86UR1 476 aa13.28□□□□□ -0.28
DDR1-270ENST00000513043 PALMDQ9NP74 551 aa13.28□□□□□ -0.28
DDR1-270ENST00000513043 IGHV3OR16-8A0A075B7F1 116 aa13.27□□□□□ -0.29
DDR1-270ENST00000513043 C15orf62A8K5M9 175 aa13.27□□□□□ -0.29
DDR1-270ENST00000513043 SNRPGP15A8MWD9 76 aa13.27□□□□□ -0.29
DDR1-270ENST00000513043 NUPL2O15504 423 aaKnown RBP13.27□□□□□ -0.29
DDR1-270ENST00000513043 CTSGP08311 255 aa13.27□□□□□ -0.29
DDR1-270ENST00000513043 EDN2P20800 178 aa13.27□□□□□ -0.29
DDR1-270ENST00000513043 DCTN2Q13561 401 aaKnown RBP13.27□□□□□ -0.29
DDR1-270ENST00000513043 FAM106AQ4KMX7 169 aa13.27□□□□□ -0.29
DDR1-270ENST00000513043 SPANXN5Q5MJ07 72 aa13.27□□□□□ -0.29
DDR1-270ENST00000513043 KPRPQ5T749 579 aaPredicted RBP13.27□□□□□ -0.29
DDR1-270ENST00000513043 SPSB3Q6PJ21 355 aa13.27□□□□□ -0.29
DDR1-270ENST00000513043 UNQ9165/PRO28630Q6UXU0 137 aa13.27□□□□□ -0.29
DDR1-270ENST00000513043 GSG1LQ6UXU4 331 aa13.27□□□□□ -0.29
DDR1-270ENST00000513043 IL34Q6ZMJ4 242 aa13.27□□□□□ -0.29
DDR1-270ENST00000513043 GPHB5Q86YW7 130 aa13.27□□□□□ -0.29
DDR1-270ENST00000513043 RNASEH2CQ8TDP1 164 aaKnown RBP13.27□□□□□ -0.29
DDR1-270ENST00000513043 CIB3Q96Q77 187 aaPredicted RBP13.27□□□□□ -0.29
DDR1-270ENST00000513043 TXN2Q99757 166 aa13.27□□□□□ -0.29
DDR1-270ENST00000513043 PEMTQ9UBM1 199 aa13.27□□□□□ -0.29
DDR1-270ENST00000513043 NOTCH1P46531 2555 aa13.27□□□□□ -0.29
DDR1-270ENST00000513043 RPS10-NUDT3A0A1W2PQS6 291 aa13.26□□□□□ -0.29
DDR1-270ENST00000513043 GOSR2O14653 212 aa13.26□□□□□ -0.29
DDR1-270ENST00000513043 SIX6O95475 246 aa13.26□□□□□ -0.29
DDR1-270ENST00000513043 CSN3P07498 182 aa13.26□□□□□ -0.29
DDR1-270ENST00000513043 NPBWR1P48145 328 aa13.26□□□□□ -0.29
DDR1-270ENST00000513043 C2orf50Q96LR7 162 aa13.26□□□□□ -0.29
DDR1-270ENST00000513043 GAR1Q9NY12 217 aaKnown RBP13.26□□□□□ -0.29
DDR1-270ENST00000513043 SSNA1O43805 119 aa13.25□□□□□ -0.29
DDR1-270ENST00000513043 MBPP02686 304 aaPredicted RBP13.25□□□□□ -0.29
DDR1-270ENST00000513043 FCGR2BP31994 310 aaPredicted RBP13.25□□□□□ -0.29
DDR1-270ENST00000513043 RND2P52198 227 aa13.25□□□□□ -0.29
DDR1-270ENST00000513043 RAB11AP62491 216 aa13.25□□□□□ -0.29
DDR1-270ENST00000513043 REC114Q7Z4M0 266 aa13.25□□□□□ -0.29
DDR1-270ENST00000513043 CACNG8Q8WXS5 425 aa13.25□□□□□ -0.29
DDR1-270ENST00000513043 ACY3Q96HD9 319 aa13.25□□□□□ -0.29
DDR1-270ENST00000513043 ATP6V0BQ99437 205 aa13.25□□□□□ -0.29
DDR1-270ENST00000513043 C20orf24Q9BUV8 137 aa13.25□□□□□ -0.29
DDR1-270ENST00000513043 ZNF436Q9C0F3 470 aaPredicted RBP13.25□□□□□ -0.29
DDR1-270ENST00000513043 PSENENQ9NZ42 101 aa13.25□□□□□ -0.29
DDR1-270ENST00000513043 RCL1Q9Y2P8 373 aaKnown RBP13.25□□□□□ -0.29
DDR1-270ENST00000513043 LSM5Q9Y4Y9 91 aaKnown RBP13.25□□□□□ -0.29
DDR1-270ENST00000513043 SELENOKQ9Y6D0 94 aa13.25□□□□□ -0.29
DDR1-270ENST00000513043 C2orf70A6NJV1 201 aa13.24□□□□□ -0.29
DDR1-270ENST00000513043 LGALS9O00182 355 aa13.24□□□□□ -0.29
DDR1-270ENST00000513043 TMEM50AO95807 157 aa13.24□□□□□ -0.29
DDR1-270ENST00000513043 INSL3P51460 131 aa13.24□□□□□ -0.29
DDR1-270ENST00000513043 RPP30P78346 268 aaKnown RBP13.24□□□□□ -0.29
DDR1-270ENST00000513043 EGFEM1PQ0D2K5 195 aa13.24□□□□□ -0.29
DDR1-270ENST00000513043 TM4SF20Q53R12 229 aa13.24□□□□□ -0.29
DDR1-270ENST00000513043 PRSS54Q6PEW0 395 aa13.24□□□□□ -0.29
DDR1-270ENST00000513043 SLC16A13Q7RTY0 426 aa13.24□□□□□ -0.29
DDR1-270ENST00000513043 OR4X1Q8NH49 305 aa13.24□□□□□ -0.29
DDR1-270ENST00000513043 STRAPQ9Y3F4 350 aaKnown RBP13.24□□□□□ -0.29
DDR1-270ENST00000513043 TGP01266 2768 aa13.24□□□□□ -0.29
DDR1-270ENST00000513043 TMEM213A2RRL7 107 aa13.23□□□□□ -0.29
DDR1-270ENST00000513043 ZNF207O43670 478 aaKnown RBP13.23□□□□□ -0.29
DDR1-270ENST00000513043 CLN5O75503 358 aa13.23□□□□□ -0.29
DDR1-270ENST00000513043 YIF1AO95070 293 aa13.23□□□□□ -0.29
DDR1-270ENST00000513043 SLC25A4P12235 298 aa13.23□□□□□ -0.29
DDR1-270ENST00000513043 ATP5IP56385 69 aaPredicted RBP13.23□□□□□ -0.29
DDR1-270ENST00000513043 S100A10P60903 97 aa13.23□□□□□ -0.29
DDR1-270ENST00000513043 RELQ04864 619 aaPredicted RBP13.23□□□□□ -0.29
DDR1-270ENST00000513043 CD69Q07108 199 aa13.23□□□□□ -0.29
DDR1-270ENST00000513043 RGS21Q2M5E4 152 aa13.23□□□□□ -0.29
DDR1-270ENST00000513043 ETFRF1Q6IPR1 90 aa13.23□□□□□ -0.29
DDR1-270ENST00000513043 ADAMTSL5Q6ZMM2 481 aa13.23□□□□□ -0.29
DDR1-270ENST00000513043 TMEM190Q8WZ59 177 aa13.23□□□□□ -0.29
DDR1-270ENST00000513043 NPIPB3Q92617 1050 aa13.23□□□□□ -0.29
DDR1-270ENST00000513043 ZNF414Q96IQ9 312 aa13.23□□□□□ -0.29
DDR1-270ENST00000513043 ALG5Q9Y673 324 aa13.23□□□□□ -0.29
DDR1-270ENST00000513043 K7EPK0 472 aa13.22□□□□□ -0.29
DDR1-270ENST00000513043 NDUFA4O00483 81 aa13.22□□□□□ -0.29
DDR1-270ENST00000513043 LY86O95711 162 aa13.22□□□□□ -0.29
DDR1-270ENST00000513043 FOLR2P14207 255 aa13.22□□□□□ -0.29
DDR1-270ENST00000513043 PAX9P55771 341 aa13.22□□□□□ -0.29
DDR1-270ENST00000513043 TIGITQ495A1 244 aa13.22□□□□□ -0.29
DDR1-270ENST00000513043 SMIM8Q96KF7 97 aa13.22□□□□□ -0.29
DDR1-270ENST00000513043 RAB40CQ96S21 281 aa13.22□□□□□ -0.29
DDR1-270ENST00000513043 AURKAIP1Q9NWT8 199 aaPredicted RBP13.22□□□□□ -0.29
DDR1-270ENST00000513043 C7orf66A4D0T2 115 aa13.21□□□□□ -0.29
DDR1-270ENST00000513043 A8MWP6 167 aa13.21□□□□□ -0.29
DDR1-270ENST00000513043 L7N2F9 121 aa13.21□□□□□ -0.29
DDR1-270ENST00000513043 IGLV1-51P01701 117 aa13.21□□□□□ -0.29
DDR1-270ENST00000513043 VAMP2P63027 116 aa13.21□□□□□ -0.29
DDR1-270ENST00000513043 RAB32Q13637 225 aa13.21□□□□□ -0.29
DDR1-270ENST00000513043 DYNLRB2Q8TF09 96 aa13.21□□□□□ -0.29
DDR1-270ENST00000513043 PRR25Q96S07 402 aa13.21□□□□□ -0.29
DDR1-270ENST00000513043 UFC1Q9Y3C8 167 aa13.21□□□□□ -0.29
DDR1-270ENST00000513043 CCNKO75909 580 aa13.2□□□□□ -0.3
DDR1-270ENST00000513043 IGKV1-17P01599 117 aa13.2□□□□□ -0.3
DDR1-270ENST00000513043 METTL15P1P0C7V9 234 aa13.2□□□□□ -0.3
DDR1-270ENST00000513043 IGLC1P0CG04 106 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms