RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 ZNF414Q96IQ9 312 aa11.5□□□□□ -0.57
DDR1-269ENST00000512725 TMEM56Q96MV1 263 aa11.5□□□□□ -0.57
DDR1-269ENST00000512725 NXF2Q9GZY0 626 aaKnown RBP11.5□□□□□ -0.57
DDR1-269ENST00000512725 RBM38Q9H0Z9 239 aaKnown RBP11.5□□□□□ -0.57
DDR1-269ENST00000512725 PLEKHA2Q9HB19 425 aa11.5□□□□□ -0.57
DDR1-269ENST00000512725 SCPEP1Q9HB40 452 aa11.5□□□□□ -0.57
DDR1-269ENST00000512725 IFT46Q9NQC8 304 aa11.5□□□□□ -0.57
DDR1-269ENST00000512725 TMEM14BQ9NUH8 114 aa11.5□□□□□ -0.57
DDR1-269ENST00000512725 MARCH11A6NNE9 402 aa11.49□□□□□ -0.57
DDR1-269ENST00000512725 ZNF705EA8MWA4 302 aaPredicted RBP11.49□□□□□ -0.57
DDR1-269ENST00000512725 ACTL10Q5JWF8 245 aa11.49□□□□□ -0.57
DDR1-269ENST00000512725 ZNF818PQ6ZRF7 136 aa11.49□□□□□ -0.57
DDR1-269ENST00000512725 HOGA1Q86XE5 327 aa11.49□□□□□ -0.57
DDR1-269ENST00000512725 BEST4Q8NFU0 473 aa11.49□□□□□ -0.57
DDR1-269ENST00000512725 MCFD2Q8NI22 146 aa11.49□□□□□ -0.57
DDR1-269ENST00000512725 COMMD9Q9P000 198 aa11.49□□□□□ -0.57
DDR1-269ENST00000512725 KRASP01116 189 aa11.48□□□□□ -0.57
DDR1-269ENST00000512725 ZNF688P0C7X2 276 aa11.48□□□□□ -0.57
DDR1-269ENST00000512725 G6PCP35575 357 aa11.48□□□□□ -0.57
DDR1-269ENST00000512725 MSMO1Q15800 293 aa11.48□□□□□ -0.57
DDR1-269ENST00000512725 C1orf134Q5TEV5 83 aa11.48□□□□□ -0.57
DDR1-269ENST00000512725 TOMM20LQ6UXN7 152 aa11.48□□□□□ -0.57
DDR1-269ENST00000512725 MOB3AQ96BX8 217 aa11.48□□□□□ -0.57
DDR1-269ENST00000512725 SLIRPQ9GZT3 109 aaKnown RBP11.48□□□□□ -0.57
DDR1-269ENST00000512725 TMEM231Q9H6L2 316 aa11.48□□□□□ -0.57
DDR1-269ENST00000512725 EXTL2Q9UBQ6 330 aa11.48□□□□□ -0.57
DDR1-269ENST00000512725 MT-CO2P00403 227 aa11.47□□□□□ -0.57
DDR1-269ENST00000512725 S100A5P33763 92 aa11.47□□□□□ -0.57
DDR1-269ENST00000512725 LPAR6P43657 344 aa11.47□□□□□ -0.57
DDR1-269ENST00000512725 EMP1P54849 157 aa11.47□□□□□ -0.57
DDR1-269ENST00000512725 MRPS10P82664 201 aaKnown RBP11.47□□□□□ -0.57
DDR1-269ENST00000512725 Q6ZRM9 215 aa11.47□□□□□ -0.57
DDR1-269ENST00000512725 OR1P1Q8NH06 330 aa11.47□□□□□ -0.57
DDR1-269ENST00000512725 DIRAS2Q96HU8 199 aa11.47□□□□□ -0.57
DDR1-269ENST00000512725 TXN2Q99757 166 aa11.47□□□□□ -0.57
DDR1-269ENST00000512725 VSIRQ9H7M9 311 aa11.47□□□□□ -0.57
DDR1-269ENST00000512725 I3L2K1 104 aa11.46□□□□□ -0.57
DDR1-269ENST00000512725 CTDSP2O14595 271 aa11.46□□□□□ -0.57
DDR1-269ENST00000512725 RLN1P04808 185 aa11.46□□□□□ -0.57
DDR1-269ENST00000512725 FGF2P09038 288 aa11.46□□□□□ -0.57
DDR1-269ENST00000512725 TAS2R46P59540 309 aa11.46□□□□□ -0.57
DDR1-269ENST00000512725 HERV-K104P61576 105 aa11.46□□□□□ -0.57
DDR1-269ENST00000512725 SNX29P2Q8IUI4 249 aa11.46□□□□□ -0.57
DDR1-269ENST00000512725 PRNDQ9UKY0 176 aa11.46□□□□□ -0.57
DDR1-269ENST00000512725 PUS1Q9Y606 427 aaKnown RBP eCLIP11.46□□□□□ -0.57
DDR1-269ENST00000512725 TRAV2A0A0B4J234 112 aa11.45□□□□□ -0.58
DDR1-269ENST00000512725 HTN3P15516 51 aa11.45□□□□□ -0.58
DDR1-269ENST00000512725 Q6ZR54 194 aa11.45□□□□□ -0.58
DDR1-269ENST00000512725 OR5AP2Q8NGF4 316 aa11.45□□□□□ -0.58
DDR1-269ENST00000512725 GPX8Q8TED1 209 aa11.45□□□□□ -0.58
DDR1-269ENST00000512725 FCAMRQ8WWV6 532 aa11.45□□□□□ -0.58
DDR1-269ENST00000512725 FKBP11Q9NYL4 201 aa11.45□□□□□ -0.58
DDR1-269ENST00000512725 LRP1BQ9NZR2 4599 aa11.45□□□□□ -0.58
DDR1-269ENST00000512725 NAT1P18440 290 aa11.44□□□□□ -0.58
DDR1-269ENST00000512725 NPPCP23582 126 aa11.44□□□□□ -0.58
DDR1-269ENST00000512725 F2RP25116 425 aa11.44□□□□□ -0.58
DDR1-269ENST00000512725 RCVRNP35243 200 aa11.44□□□□□ -0.58
DDR1-269ENST00000512725 SSBP1Q04837 148 aaKnown RBP11.44□□□□□ -0.58
DDR1-269ENST00000512725 MIXL1Q9H2W2 232 aa11.44□□□□□ -0.58
DDR1-269ENST00000512725 XCL2Q9UBD3 114 aa11.44□□□□□ -0.58
DDR1-269ENST00000512725 ANAPC10Q9UM13 185 aa11.44□□□□□ -0.58
DDR1-269ENST00000512725 A0A1W2PS18 150 aa11.43□□□□□ -0.58
DDR1-269ENST00000512725 FABP12A6NFH5 140 aa11.43□□□□□ -0.58
DDR1-269ENST00000512725 DBX1A6NMT0 343 aa11.43□□□□□ -0.58
DDR1-269ENST00000512725 K7EQG2 157 aa11.43□□□□□ -0.58
DDR1-269ENST00000512725 CDK2AP2O75956 126 aa11.43□□□□□ -0.58
DDR1-269ENST00000512725 ZNF600Q6ZNG1 722 aa11.43□□□□□ -0.58
DDR1-269ENST00000512725 CSNK1G2-AS1Q8NCQ2 148 aa11.43□□□□□ -0.58
DDR1-269ENST00000512725 OR5H2Q8NGV7 314 aa11.43□□□□□ -0.58
DDR1-269ENST00000512725 BORCS5Q969J3 196 aa11.43□□□□□ -0.58
DDR1-269ENST00000512725 BATF3Q9NR55 127 aa11.43□□□□□ -0.58
DDR1-269ENST00000512725 IGHV3OR16-12A0A075B7B8 117 aa11.42□□□□□ -0.58
DDR1-269ENST00000512725 MEIS3P1A6NDR6 274 aa11.42□□□□□ -0.58
DDR1-269ENST00000512725 GABARAPH6UMI1 98 aa11.42□□□□□ -0.58
DDR1-269ENST00000512725 CTDSPLO15194 276 aa11.42□□□□□ -0.58
DDR1-269ENST00000512725 TNFSF8P32971 234 aa11.42□□□□□ -0.58
DDR1-269ENST00000512725 NPBWR1P48145 328 aa11.42□□□□□ -0.58
DDR1-269ENST00000512725 DHRS2Q13268 280 aa11.42□□□□□ -0.58
DDR1-269ENST00000512725 IL18Q14116 193 aa11.42□□□□□ -0.58
DDR1-269ENST00000512725 PSMG4Q5JS54 123 aa11.42□□□□□ -0.58
DDR1-269ENST00000512725 OR4A16Q8NH70 328 aa11.42□□□□□ -0.58
DDR1-269ENST00000512725 GRAMD2BQ96HH9 432 aa11.42□□□□□ -0.58
DDR1-269ENST00000512725 NARS2Q96I59 477 aaKnown RBP11.42□□□□□ -0.58
DDR1-269ENST00000512725 METTL26Q96S19 204 aa11.42□□□□□ -0.58
DDR1-269ENST00000512725 PGLYRP1O75594 196 aaPredicted RBP11.41□□□□□ -0.58
DDR1-269ENST00000512725 CD74P04233 296 aa11.41□□□□□ -0.58
DDR1-269ENST00000512725 SPART-AS1P0CW21 52 aa11.41□□□□□ -0.58
DDR1-269ENST00000512725 TBPP20226 339 aa11.41□□□□□ -0.58
DDR1-269ENST00000512725 GNRHRP30968 328 aa11.41□□□□□ -0.58
DDR1-269ENST00000512725 P2RY1P47900 373 aa11.41□□□□□ -0.58
DDR1-269ENST00000512725 PPP5CP53041 499 aa11.41□□□□□ -0.58
DDR1-269ENST00000512725 NUTF2P61970 127 aaKnown RBP11.41□□□□□ -0.58
DDR1-269ENST00000512725 TNP2Q05952 138 aa11.41□□□□□ -0.58
DDR1-269ENST00000512725 OR6F1Q8NGZ6 308 aa11.41□□□□□ -0.58
DDR1-269ENST00000512725 RAB40CQ96S21 281 aa11.41□□□□□ -0.58
DDR1-269ENST00000512725 ABHD1Q96SE0 405 aa11.41□□□□□ -0.58
DDR1-269ENST00000512725 TSC22D3Q99576 134 aa11.41□□□□□ -0.58
DDR1-269ENST00000512725 C1QTNF4Q9BXJ3 329 aa11.41□□□□□ -0.58
DDR1-269ENST00000512725 ZFAND3Q9H8U3 227 aa11.41□□□□□ -0.58
DDR1-269ENST00000512725 SCRT2Q9NQ03 307 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms