RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 DNASE2O00115 360 aaPredicted RBP9.21□□□□□ -0.94
VEGFA-216ENST00000512683 CORTO00230 105 aa9.21□□□□□ -0.94
VEGFA-216ENST00000512683 ST8SIA3O43173 380 aa9.21□□□□□ -0.94
VEGFA-216ENST00000512683 ATG12O94817 140 aa9.21□□□□□ -0.94
VEGFA-216ENST00000512683 TMBIM6P55061 237 aa9.21□□□□□ -0.94
VEGFA-216ENST00000512683 MRPS10P82664 201 aaKnown RBP9.21□□□□□ -0.94
VEGFA-216ENST00000512683 SCGB2B2Q4G0G5 96 aa9.21□□□□□ -0.94
VEGFA-216ENST00000512683 PVRIGQ6DKI7 326 aa9.21□□□□□ -0.94
VEGFA-216ENST00000512683 Q6ZRM9 215 aa9.21□□□□□ -0.94
VEGFA-216ENST00000512683 RAB2BQ8WUD1 216 aa9.21□□□□□ -0.94
VEGFA-216ENST00000512683 RTBDNQ9BSG5 229 aaPredicted RBP9.21□□□□□ -0.94
VEGFA-216ENST00000512683 COPZ2Q9P299 210 aa9.21□□□□□ -0.94
VEGFA-216ENST00000512683 CTDSPLO15194 276 aa9.2□□□□□ -0.94
VEGFA-216ENST00000512683 SCGB2A1O75556 95 aa9.2□□□□□ -0.94
VEGFA-216ENST00000512683 AKR1C2P52895 323 aa9.2□□□□□ -0.94
VEGFA-216ENST00000512683 SUB1P53999 127 aaKnown RBP eCLIP9.2□□□□□ -0.94
VEGFA-216ENST00000512683 TOMM20LQ6UXN7 152 aa9.2□□□□□ -0.94
VEGFA-216ENST00000512683 ZNF600Q6ZNG1 722 aa9.2□□□□□ -0.94
VEGFA-216ENST00000512683 TCF24Q7RTU0 167 aa9.2□□□□□ -0.94
VEGFA-216ENST00000512683 CCDC71LQ8N9Z2 235 aa9.2□□□□□ -0.94
VEGFA-216ENST00000512683 LHFPL5Q8TAF8 219 aa9.2□□□□□ -0.94
VEGFA-216ENST00000512683 GLYATL2Q8WU03 294 aa9.2□□□□□ -0.94
VEGFA-216ENST00000512683 PINX1Q96BK5 328 aaKnown RBP9.2□□□□□ -0.94
VEGFA-216ENST00000512683 BCL7BQ9BQE9 202 aa9.2□□□□□ -0.94
VEGFA-216ENST00000512683 TMEM222Q9H0R3 208 aa9.2□□□□□ -0.94
VEGFA-216ENST00000512683 CCDC59Q9P031 241 aaKnown RBP9.2□□□□□ -0.94
VEGFA-216ENST00000512683 B3GALNT1O75752 331 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 CDS2O95674 445 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 IFNA17P01571 189 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 OR5AC1P0C628 307 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 RNASE2P10153 161 aaKnown RBP9.19□□□□□ -0.94
VEGFA-216ENST00000512683 SNCAP37840 140 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 ETV6P41212 452 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 TFPI2P48307 235 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 NANOS2P60321 138 aaKnown RBP9.19□□□□□ -0.94
VEGFA-216ENST00000512683 MEF2DQ14814 521 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 TRIM16LQ309B1 348 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 AARDQ4LEZ3 155 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 MORN3Q6PF18 240 aaPredicted RBP9.19□□□□□ -0.94
VEGFA-216ENST00000512683 CENPSQ8N2Z9 138 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 SLC35G3Q8N808 338 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 OR4C16Q8NGL9 310 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 GRAMD2BQ96HH9 432 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 DIRAS2Q96HU8 199 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 SOSTQ9BQB4 213 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 SLIRPQ9GZT3 109 aaKnown RBP9.19□□□□□ -0.94
VEGFA-216ENST00000512683 GPR132Q9UNW8 380 aa9.19□□□□□ -0.94
VEGFA-216ENST00000512683 IGHV3-49A0A0A0MS15 119 aa9.18□□□□□ -0.94
VEGFA-216ENST00000512683 ANKRD20A5PA0PJZ0 165 aa9.18□□□□□ -0.94
VEGFA-216ENST00000512683 TMEM50AO95807 157 aa9.18□□□□□ -0.94
VEGFA-216ENST00000512683 CA1P00915 261 aaPredicted RBP9.18□□□□□ -0.94
VEGFA-216ENST00000512683 AKAIN1P0CW23 69 aa9.18□□□□□ -0.94
VEGFA-216ENST00000512683 SPP1P10451 314 aa9.18□□□□□ -0.94
VEGFA-216ENST00000512683 NPPCP23582 126 aa9.18□□□□□ -0.94
VEGFA-216ENST00000512683 RPL5P46777 297 aaKnown RBP9.18□□□□□ -0.94
VEGFA-216ENST00000512683 IL18Q14116 193 aa9.18□□□□□ -0.94
VEGFA-216ENST00000512683 SURF2Q15527 256 aaPredicted RBP9.18□□□□□ -0.94
VEGFA-216ENST00000512683 BSXQ3C1V8 233 aa9.18□□□□□ -0.94
VEGFA-216ENST00000512683 STHQ8IWL8 128 aa9.18□□□□□ -0.94
VEGFA-216ENST00000512683 RRNAD1Q96FB5 475 aaKnown RBP9.18□□□□□ -0.94
VEGFA-216ENST00000512683 MS4A6AQ9H2W1 248 aa9.18□□□□□ -0.94
VEGFA-216ENST00000512683 FNDC4Q9H6D8 234 aaPredicted RBP9.18□□□□□ -0.94
VEGFA-216ENST00000512683 MRPL36Q9P0J6 103 aaKnown RBP9.18□□□□□ -0.94
VEGFA-216ENST00000512683 FBXL17Q9UF56 701 aa9.18□□□□□ -0.94
VEGFA-216ENST00000512683 TRAV30A0A087WSZ9 112 aa9.17□□□□□ -0.94
VEGFA-216ENST00000512683 TEX13DA0A0J9YY54 714 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-216ENST00000512683 CRYM-AS1A6NIL9 109 aa9.17□□□□□ -0.94
VEGFA-216ENST00000512683 DISC1C4P0D8 188 aa9.17□□□□□ -0.94
VEGFA-216ENST00000512683 H3BMQ9 156 aa9.17□□□□□ -0.94
VEGFA-216ENST00000512683 GSTZ1O43708 216 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-216ENST00000512683 DEDDO75618 318 aa9.17□□□□□ -0.94
VEGFA-216ENST00000512683 MIFP14174 115 aa9.17□□□□□ -0.94
VEGFA-216ENST00000512683 TNFSF8P32971 234 aa9.17□□□□□ -0.94
VEGFA-216ENST00000512683 DEFB131AP59861 70 aa9.17□□□□□ -0.94
VEGFA-216ENST00000512683 MLANAQ16655 118 aa9.17□□□□□ -0.94
VEGFA-216ENST00000512683 SELENOHQ8IZQ5 122 aaKnown RBP9.17□□□□□ -0.94
VEGFA-216ENST00000512683 GBGT1Q8N5D6 347 aa9.17□□□□□ -0.94
VEGFA-216ENST00000512683 OR51S1Q8NGJ8 323 aa9.17□□□□□ -0.94
VEGFA-216ENST00000512683 NARS2Q96I59 477 aaKnown RBP9.17□□□□□ -0.94
VEGFA-216ENST00000512683 NAA60Q9H7X0 242 aa9.17□□□□□ -0.94
VEGFA-216ENST00000512683 ZFAND3Q9H8U3 227 aa9.17□□□□□ -0.94
VEGFA-216ENST00000512683 RABL2AQ9UBK7 228 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-216ENST00000512683 RABL2BQ9UNT1 228 aa9.17□□□□□ -0.94
VEGFA-216ENST00000512683 C14orf166Q9Y224 244 aaKnown RBP9.17□□□□□ -0.94
VEGFA-216ENST00000512683 PUS1Q9Y606 427 aaKnown RBP eCLIP9.17□□□□□ -0.94
VEGFA-216ENST00000512683 IGKV3-7A0A075B6H7 116 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 IGHV3OR16-13A0A075B7E8 117 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 IGHV3-74A0A0B4J1X5 117 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 A0A1B0GU03 582 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 APOHP02749 345 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-216ENST00000512683 CRYBB3P26998 211 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 HOXA1P49639 335 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-216ENST00000512683 EIF2B2P49770 351 aaKnown RBP9.16□□□□□ -0.94
VEGFA-216ENST00000512683 AP2S1P53680 142 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-216ENST00000512683 SPCS3P61009 180 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 RPL11P62913 178 aaKnown RBP9.16□□□□□ -0.94
VEGFA-216ENST00000512683 ZNF124Q15973 351 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 FAM219AQ8IW50 185 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 LILRB2Q8N423 598 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 ST8SIA2Q92186 375 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms