RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 VIRMAQ69YN4 1812 aaKnown RBP7.42□□□□□ -1.22
VCAN-208ENST00000512590 OOSP1A8MZH6 123 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 PRB1P04280 392 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 CRYBA2P53672 197 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 FAM90A26D6RGX4 464 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 NGFRP08138 427 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 ATP6V0CP27449 155 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 NEU3Q9UQ49 428 aa7.42□□□□□ -1.22
VCAN-208ENST00000512590 DLG5Q8TDM6 1919 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 NRXN3Q9Y4C0 1643 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 TMEM238C9JI98 176 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 NXPH4O95158 308 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 SMAD5-AS1Q9Y6J3 95 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 M0R1W7 72 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 CLPSL2Q6UWE3 100 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 CRYGNQ8WXF5 182 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 RHPN1-AS1Q9BWJ2 59 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 SCRT2Q9NQ03 307 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 HMX2A2RU54 273 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 H3BQ15 152 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 LDLRAD4O15165 306 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 IGFBP6P24592 240 aaPredicted RBP7.41□□□□□ -1.22
VCAN-208ENST00000512590 GCHFRP30047 84 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 PFN2P35080 140 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 ZNF660Q6AZW8 331 aaPredicted RBP7.41□□□□□ -1.22
VCAN-208ENST00000512590 SLC25A47Q6Q0C1 308 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 LINC01465Q8N7H1 131 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 NWD2Q9ULI1 1742 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 ARID1BQ8NFD5 2236 aaPredicted RBP7.41□□□□□ -1.22
VCAN-208ENST00000512590 IGHV3-16A0A0C4DH30 117 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 MYMXA0A1B0GTQ4 84 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 DEFB113Q30KQ7 82 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 NHLRC3Q5JS37 347 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 ZFAND2BQ8WV99 257 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 PLEKHB2Q96CS7 222 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 SLC25A39Q9BZJ4 359 aaPredicted RBP7.41□□□□□ -1.22
VCAN-208ENST00000512590 TNFRSF12AQ9NP84 129 aa7.41□□□□□ -1.22
VCAN-208ENST00000512590 VSIG8P0DPA2 414 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 ZNF708P17019 499 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 GZMMP51124 257 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 GAS1P54826 345 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 FAM3BP58499 235 aaPredicted RBP7.4□□□□□ -1.22
VCAN-208ENST00000512590 RND3P61587 244 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 CASC2Q6XLA1 102 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 SPRED2Q7Z698 418 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 ICOSQ9Y6W8 199 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 TRAV5A0A0B4J249 113 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 H0YL77 283 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 CD59P13987 128 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 TIMP3P35625 211 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 IGHV2-26A0A0B4J1V2 119 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 BUB3O43684 328 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 IGLV3-25P01717 112 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 IGHMP01871 453 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 GP9P14770 177 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 NAT1P18440 290 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 TMEM258P61165 79 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 C7orf33Q8WU49 177 aa7.4□□□□□ -1.22
VCAN-208ENST00000512590 AWAT1Q58HT5 328 aa7.4□□□□□ -1.23
VCAN-208ENST00000512590 C12orf73Q69YU5 71 aa7.4□□□□□ -1.23
VCAN-208ENST00000512590 SFTA2Q6UW10 78 aa7.4□□□□□ -1.23
VCAN-208ENST00000512590 TNFRSF14Q92956 283 aa7.4□□□□□ -1.23
VCAN-208ENST00000512590 DAZ1Q9NQZ3 744 aaKnown RBP7.4□□□□□ -1.23
VCAN-208ENST00000512590 IRF3Q14653 427 aa7.4□□□□□ -1.23
VCAN-208ENST00000512590 CENPWQ5EE01 88 aa7.4□□□□□ -1.23
VCAN-208ENST00000512590 AQP3Q92482 292 aa7.4□□□□□ -1.23
VCAN-208ENST00000512590 LINC01549A6NIU2 74 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 FAM90A9PA6NNJ1 464 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 GAGE2BQ13066 116 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 OR8D4Q8NGM9 314 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 CFHR4Q92496 578 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 SHISA4Q96DD7 197 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 TMEM222Q9H0R3 208 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 SMDT1Q9H4I9 107 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 A0A0G2JNJ9 132 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 K7ENP7 123 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 OVOL3O00110 214 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 C5orf47Q569G3 176 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 Q9UFV3 132 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 KLK8O60259 260 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 FOXA3P55318 350 aaPredicted RBP7.39□□□□□ -1.23
VCAN-208ENST00000512590 RPL15P61313 204 aaKnown RBP7.39□□□□□ -1.23
VCAN-208ENST00000512590 C9orf139Q6ZV77 190 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 C8orf31Q8N9H6 132 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 NABP1Q96AH0 204 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 TMEM243Q9BU79 118 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 SPART-AS1P0CW21 52 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 ERG28Q9UKR5 140 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 LY6G6CO95867 125 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 IGHV3-30P01768 117 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 IGHV3-33P01772 117 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 IGHV3-30-3P0DP02 117 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 IGHV3-30-5P0DP03 117 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 KNTC1P50748 2209 aa7.39□□□□□ -1.23
VCAN-208ENST00000512590 PHIPQ8WWQ0 1821 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 NUP205Q92621 2012 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 RBM3P98179 157 aaKnown RBP7.38□□□□□ -1.23
VCAN-208ENST00000512590 C5orf64Q2M2E5 130 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 DSCR8Q96T75 97 aa7.38□□□□□ -1.23
VCAN-208ENST00000512590 B9D2Q9BPU9 175 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms