RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-209ENST00000512130 PARD6GQ9BYG4 376 aaPredicted RBP2.29□□□□□ -2.04
LINC01088-209ENST00000512130 VCX3BQ9H321 246 aa2.29□□□□□ -2.04
LINC01088-209ENST00000512130 WNK3Q9BYP7 1800 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 RREB1Q92766 1687 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 ROBO1Q9Y6N7 1651 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 DUOX1Q9NRD9 1551 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 MED23Q9ULK4 1368 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 TGIF2-C20orf24A0A0A6YYL0 155 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 MSMBP08118 114 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 TFPTP0C1Z6 253 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 PSME3P61289 254 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 TPRXLQ17RH7 258 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 TRAPPC5Q8IUR0 188 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 C1orf158Q8N1D5 194 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 C10orf126Q8N4M7 172 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 ZNF676Q8N7Q3 588 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 VPS29Q9UBQ0 182 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 FUT9Q9Y231 359 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 NCKAP5O14513 1909 aa2.28□□□□□ -2.04
LINC01088-209ENST00000512130 NUP188Q5SRE5 1749 aa2.28□□□□□ -2.05
LINC01088-209ENST00000512130 NRAPQ86VF7 1730 aa2.28□□□□□ -2.05
LINC01088-209ENST00000512130 C5P01031 1676 aa2.28□□□□□ -2.05
LINC01088-209ENST00000512130 FBN1P35555 2871 aaKnown RBP2.28□□□□□ -2.05
LINC01088-209ENST00000512130 ZNF609O15014 1411 aa2.27□□□□□ -2.05
LINC01088-209ENST00000512130 IGHV1-18A0A0C4DH31 117 aa2.27□□□□□ -2.05
LINC01088-209ENST00000512130 HMSDA8MTL9 139 aa2.27□□□□□ -2.05
LINC01088-209ENST00000512130 INMT-MINDY4F8WBC2 141 aa2.27□□□□□ -2.05
LINC01088-209ENST00000512130 C1QAP02745 245 aa2.27□□□□□ -2.05
LINC01088-209ENST00000512130 FGF6P10767 208 aa2.27□□□□□ -2.05
LINC01088-209ENST00000512130 MYL6P60660 151 aa2.27□□□□□ -2.05
LINC01088-209ENST00000512130 C20orf196Q8IYI0 205 aa2.27□□□□□ -2.05
LINC01088-209ENST00000512130 RPP25LQ8N5L8 163 aaKnown RBP2.27□□□□□ -2.05
LINC01088-209ENST00000512130 EFCAB1Q9HAE3 211 aa2.27□□□□□ -2.05
LINC01088-209ENST00000512130 ARFGEF2Q9Y6D5 1785 aa2.27□□□□□ -2.05
LINC01088-209ENST00000512130 COL5A3P25940 1745 aaPredicted RBP2.26□□□□□ -2.05
LINC01088-209ENST00000512130 TOGARAM1Q9Y4F4 1720 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 TRBV20OR9-2A0A075B6H5 130 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 PPBPP02775 128 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 SERPINA7P05543 415 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 SERPINA6P08185 405 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 RPS17P08708 135 aaKnown RBP2.26□□□□□ -2.05
LINC01088-209ENST00000512130 SULT1A3P0DMM9 295 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 SULT1A4P0DMN0 295 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 KRTAP13-4Q3LI77 160 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 TMEM86AQ8N2M4 240 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 DCUN1D1Q96GG9 259 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 COMMD5Q9GZQ3 224 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 DOK5Q9P104 306 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 TIMM22Q9Y584 194 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 BCL9LQ86UU0 1499 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 RGPD2P0DJD1 1756 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 LAMB2P55268 1798 aa2.26□□□□□ -2.05
LINC01088-209ENST00000512130 C10orf71Q711Q0 1435 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 PHLPP1O60346 1717 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 TJP1Q07157 1748 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 SCN7AQ01118 1682 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 A0A0J9YY10 115 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 A0A1B0GX78 115 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 IRGMA1A4Y4 181 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 GGT3PA6NGU5 568 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 ZNF705FA8MVS1 300 aaPredicted RBP2.25□□□□□ -2.05
LINC01088-209ENST00000512130 SLC22A1O15245 554 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 CCL5P13501 91 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 HLA-DMBP28068 263 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 IFITM2Q01629 132 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 ALX1Q15699 326 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 GUK1Q16774 197 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 ALKAL1Q6UXT8 129 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 DYNAPQ8N1N2 210 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 LRRC25Q8N386 305 aaPredicted RBP2.25□□□□□ -2.05
LINC01088-209ENST00000512130 TMEM86BQ8N661 226 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 ANP32BQ92688 251 aaKnown RBP2.25□□□□□ -2.05
LINC01088-209ENST00000512130 CHST6Q9GZX3 395 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 PRTFDC1Q9NRG1 225 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 IL36BQ9NZH7 164 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 ANKRD36CQ5JPF3 1778 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 RGPD5Q99666 1765 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 DDX60Q8IY21 1712 aaKnown RBP2.25□□□□□ -2.05
LINC01088-209ENST00000512130 ARAP2Q8WZ64 1704 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 WDR90Q96KV7 1748 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 NHSQ6T4R5 1651 aa2.25□□□□□ -2.05
LINC01088-209ENST00000512130 GBF1Q92538 1859 aa2.24□□□□□ -2.05
LINC01088-209ENST00000512130 RGPD3A6NKT7 1758 aaPredicted RBP2.24□□□□□ -2.05
LINC01088-209ENST00000512130 BCORQ6W2J9 1755 aa2.24□□□□□ -2.05
LINC01088-209ENST00000512130 RGPD4Q7Z3J3 1758 aa2.24□□□□□ -2.05
LINC01088-209ENST00000512130 MEIKINA0A087WXM9 373 aa2.24□□□□□ -2.05
LINC01088-209ENST00000512130 CLDN24A6NM45 220 aa2.24□□□□□ -2.05
LINC01088-209ENST00000512130 PGLYRP1O75594 196 aaPredicted RBP2.24□□□□□ -2.05
LINC01088-209ENST00000512130 LYPLA2O95372 231 aa2.24□□□□□ -2.05
LINC01088-209ENST00000512130 S100A6P06703 90 aa2.24□□□□□ -2.05
LINC01088-209ENST00000512130 NFYAP23511 347 aaPredicted RBP2.24□□□□□ -2.05
LINC01088-209ENST00000512130 CDKN2CP42773 168 aa2.24□□□□□ -2.05
LINC01088-209ENST00000512130 RPL18Q07020 188 aaKnown RBP2.24□□□□□ -2.05
LINC01088-209ENST00000512130 SYPL2Q5VXT5 272 aa2.24□□□□□ -2.05
LINC01088-209ENST00000512130 SPOPLQ6IQ16 392 aa2.24□□□□□ -2.05
LINC01088-209ENST00000512130 Q6ZS49 121 aa2.24□□□□□ -2.05
LINC01088-209ENST00000512130 CLDN22Q8N7P3 220 aa2.24□□□□□ -2.05
LINC01088-209ENST00000512130 OR2T4Q8NH00 348 aa2.24□□□□□ -2.05
LINC01088-209ENST00000512130 MCFD2Q8NI22 146 aa2.24□□□□□ -2.05
LINC01088-209ENST00000512130 ULBP3Q9BZM4 244 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms