RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PVRIGQ6DKI7 326 aa9.92□□□□□ -0.82
RNF4-215ENST00000511843 DUSP18Q8NEJ0 188 aa9.92□□□□□ -0.82
RNF4-215ENST00000511843 TMEM170AQ8WVE7 144 aa9.92□□□□□ -0.82
RNF4-215ENST00000511843 SCGB3A2Q96PL1 93 aa9.92□□□□□ -0.82
RNF4-215ENST00000511843 RNF2Q99496 336 aa9.92□□□□□ -0.82
RNF4-215ENST00000511843 SRRQ9GZT4 340 aa9.92□□□□□ -0.82
RNF4-215ENST00000511843 HIPK2Q9H2X6 1198 aa9.92□□□□□ -0.82
RNF4-215ENST00000511843 HEYLQ9NQ87 328 aaPredicted RBP9.92□□□□□ -0.82
RNF4-215ENST00000511843 SMPXQ9UHP9 88 aa9.92□□□□□ -0.82
RNF4-215ENST00000511843 KCNIP3Q9Y2W7 256 aa9.92□□□□□ -0.82
RNF4-215ENST00000511843 IGHV3-66A0A0C4DH42 116 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 A0A1B0GU03 582 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 CHEK1O14757 476 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 TMEM50AO95807 157 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 SULT1A3P0DMM9 295 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 SULT1A4P0DMN0 295 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 NPBWR1P48145 328 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 AP3S2P59780 193 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 NMSQ5H8A3 153 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 SPANXN2Q5MJ10 180 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 TOMM20LQ6UXN7 152 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 TMEM116Q8NCL8 245 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 OR52E5Q8NH55 327 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 MUC7Q8TAX7 377 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 IL22RA2Q969J5 263 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 OR10C1Q96KK4 312 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 RHPN1-AS1Q9BWJ2 59 aa9.91□□□□□ -0.82
RNF4-215ENST00000511843 PUS1Q9Y606 427 aaKnown RBP eCLIP9.91□□□□□ -0.82
RNF4-215ENST00000511843 A0A0B4J2A0 478 aa9.9□□□□□ -0.82
RNF4-215ENST00000511843 LINC00854A0A1B0GVQ3 168 aa9.9□□□□□ -0.82
RNF4-215ENST00000511843 CORTO00230 105 aa9.9□□□□□ -0.82
RNF4-215ENST00000511843 TSPAN4O14817 238 aa9.9□□□□□ -0.82
RNF4-215ENST00000511843 APOHP02749 345 aaPredicted RBP9.9□□□□□ -0.82
RNF4-215ENST00000511843 VAMP1P23763 118 aa9.9□□□□□ -0.82
RNF4-215ENST00000511843 HTR2BP41595 481 aa9.9□□□□□ -0.82
RNF4-215ENST00000511843 TFPI2P48307 235 aa9.9□□□□□ -0.82
RNF4-215ENST00000511843 CCR6P51684 374 aa9.9□□□□□ -0.82
RNF4-215ENST00000511843 BAK1Q16611 211 aa9.9□□□□□ -0.82
RNF4-215ENST00000511843 ANKRD55Q3KP44 614 aa9.9□□□□□ -0.82
RNF4-215ENST00000511843 ODF3L2Q3SX64 289 aa9.9□□□□□ -0.82
RNF4-215ENST00000511843 LGI3Q8N145 548 aa9.9□□□□□ -0.82
RNF4-215ENST00000511843 SLC24A4Q8NFF2 622 aa9.9□□□□□ -0.82
RNF4-215ENST00000511843 SPAG8Q99932 426 aaPredicted RBP9.9□□□□□ -0.82
RNF4-215ENST00000511843 ZFAND3Q9H8U3 227 aa9.9□□□□□ -0.82
RNF4-215ENST00000511843 SHPKQ9UHJ6 478 aa9.9□□□□□ -0.82
RNF4-215ENST00000511843 TRAV14DV4A0A0A6YYC5 116 aa9.89□□□□□ -0.83
RNF4-215ENST00000511843 CLN5O75503 358 aa9.89□□□□□ -0.83
RNF4-215ENST00000511843 SMCO1Q147U7 214 aa9.89□□□□□ -0.83
RNF4-215ENST00000511843 TIGITQ495A1 244 aa9.89□□□□□ -0.83
RNF4-215ENST00000511843 ZFAND6Q6FIF0 208 aa9.89□□□□□ -0.83
RNF4-215ENST00000511843 LAMTOR1Q6IAA8 161 aa9.89□□□□□ -0.83
RNF4-215ENST00000511843 ZNF600Q6ZNG1 722 aa9.89□□□□□ -0.83
RNF4-215ENST00000511843 LILRB2Q8N423 598 aa9.89□□□□□ -0.83
RNF4-215ENST00000511843 GBGT1Q8N5D6 347 aa9.89□□□□□ -0.83
RNF4-215ENST00000511843 ST8SIA2Q92186 375 aa9.89□□□□□ -0.83
RNF4-215ENST00000511843 SDHCQ99643 169 aaPredicted RBP9.89□□□□□ -0.83
RNF4-215ENST00000511843 RBKSQ9H477 322 aa9.89□□□□□ -0.83
RNF4-215ENST00000511843 EDA2RQ9HAV5 297 aa9.89□□□□□ -0.83
RNF4-215ENST00000511843 DNAH7Q8WXX0 4024 aa9.89□□□□□ -0.83
RNF4-215ENST00000511843 ANXA3P12429 323 aa9.88□□□□□ -0.83
RNF4-215ENST00000511843 NPY1RP25929 384 aa9.88□□□□□ -0.83
RNF4-215ENST00000511843 RND2P52198 227 aa9.88□□□□□ -0.83
RNF4-215ENST00000511843 TNFRSF9Q07011 255 aa9.88□□□□□ -0.83
RNF4-215ENST00000511843 PPP1R1AQ13522 171 aa9.88□□□□□ -0.83
RNF4-215ENST00000511843 ZNF124Q15973 351 aa9.88□□□□□ -0.83
RNF4-215ENST00000511843 C2orf83Q53S99 150 aa9.88□□□□□ -0.83
RNF4-215ENST00000511843 PRSS54Q6PEW0 395 aa9.88□□□□□ -0.83
RNF4-215ENST00000511843 OR4X1Q8NH49 305 aa9.88□□□□□ -0.83
RNF4-215ENST00000511843 OR1S1Q8NH92 325 aa9.88□□□□□ -0.83
RNF4-215ENST00000511843 GINS3Q9BRX5 216 aa9.88□□□□□ -0.83
RNF4-215ENST00000511843 GGTLC1Q9BX51 225 aa9.88□□□□□ -0.83
RNF4-215ENST00000511843 HSPB7Q9UBY9 170 aa9.88□□□□□ -0.83
RNF4-215ENST00000511843 LOC102724200A0A096LPH7 203 aaPredicted RBP9.87□□□□□ -0.83
RNF4-215ENST00000511843 OR4C46A6NHA9 309 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 C3orf84H3BNL1 204 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 IFNA10P01566 189 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 IGKV1-17P01599 117 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 INPP1P49441 399 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 SRPXP78539 464 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 TMEM128Q5BJH2 165 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 CASC10Q5T4H9 136 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 TRIQKQ629K1 86 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 TCF24Q7RTU0 167 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 WFDC3Q8IUB2 231 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 APRG1Q8IVJ8 170 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 CENPSQ8N2Z9 138 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 DTD1Q8TEA8 209 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 SLC25A21Q9BQT8 299 aaPredicted RBP9.87□□□□□ -0.83
RNF4-215ENST00000511843 FLVCR2Q9UPI3 526 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 RYR3Q15413 4870 aa9.87□□□□□ -0.83
RNF4-215ENST00000511843 RPS10-NUDT3A0A1W2PQS6 291 aa9.86□□□□□ -0.83
RNF4-215ENST00000511843 DFFBO76075 338 aa9.86□□□□□ -0.83
RNF4-215ENST00000511843 SFT2D2O95562 160 aa9.86□□□□□ -0.83
RNF4-215ENST00000511843 IAPPP10997 89 aa9.86□□□□□ -0.83
RNF4-215ENST00000511843 LYL1P12980 280 aa9.86□□□□□ -0.83
RNF4-215ENST00000511843 FAM90A2PQ658T7 463 aa9.86□□□□□ -0.83
RNF4-215ENST00000511843 RNASEH2CQ8TDP1 164 aaKnown RBP9.86□□□□□ -0.83
RNF4-215ENST00000511843 ACY3Q96HD9 319 aa9.86□□□□□ -0.83
RNF4-215ENST00000511843 AGRNO00468 2067 aa9.86□□□□□ -0.83
RNF4-215ENST00000511843 HOXB5P09067 269 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms