RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 VAMP1P23763 118 aa12.68□□□□□ -0.38
SMN2-210ENST00000511812 SUPT4H1P63272 117 aaKnown RBP12.68□□□□□ -0.38
SMN2-210ENST00000511812 LYZL2Q7Z4W2 148 aa12.68□□□□□ -0.38
SMN2-210ENST00000511812 DEFB125Q8N687 156 aa12.68□□□□□ -0.38
SMN2-210ENST00000511812 GINS3Q9BRX5 216 aa12.68□□□□□ -0.38
SMN2-210ENST00000511812 NAP1L6A6NFF2 107 aa12.67□□□□□ -0.38
SMN2-210ENST00000511812 SMCO1Q147U7 214 aa12.67□□□□□ -0.38
SMN2-210ENST00000511812 RBMS2Q15434 407 aaKnown RBP12.67□□□□□ -0.38
SMN2-210ENST00000511812 PVRIGQ6DKI7 326 aa12.67□□□□□ -0.38
SMN2-210ENST00000511812 NOXA1Q86UR1 476 aa12.67□□□□□ -0.38
SMN2-210ENST00000511812 SLC24A4Q8NFF2 622 aa12.67□□□□□ -0.38
SMN2-210ENST00000511812 SPAG8Q99932 426 aaPredicted RBP12.67□□□□□ -0.38
SMN2-210ENST00000511812 SPATA25Q9BR10 227 aa12.67□□□□□ -0.38
SMN2-210ENST00000511812 TM2D3Q9BRN9 247 aa12.67□□□□□ -0.38
SMN2-210ENST00000511812 SRD5A3Q9H8P0 318 aa12.67□□□□□ -0.38
SMN2-210ENST00000511812 TRAV14DV4A0A0A6YYC5 116 aa12.66□□□□□ -0.38
SMN2-210ENST00000511812 DUXBA0A1W2PPF3 345 aa12.66□□□□□ -0.38
SMN2-210ENST00000511812 CENPXA8MT69 81 aa12.66□□□□□ -0.38
SMN2-210ENST00000511812 BMI1P35226 326 aa12.66□□□□□ -0.38
SMN2-210ENST00000511812 HAGHQ16775 308 aa12.66□□□□□ -0.38
SMN2-210ENST00000511812 BSXQ3C1V8 233 aa12.66□□□□□ -0.38
SMN2-210ENST00000511812 C2orf83Q53S99 150 aa12.66□□□□□ -0.38
SMN2-210ENST00000511812 ZNF600Q6ZNG1 722 aa12.66□□□□□ -0.38
SMN2-210ENST00000511812 CENPSQ8N2Z9 138 aa12.66□□□□□ -0.38
SMN2-210ENST00000511812 TMEM116Q8NCL8 245 aa12.66□□□□□ -0.38
SMN2-210ENST00000511812 OR1S1Q8NH92 325 aa12.66□□□□□ -0.38
SMN2-210ENST00000511812 SMPXQ9UHP9 88 aa12.66□□□□□ -0.38
SMN2-210ENST00000511812 COL7A1Q02388 2944 aa12.66□□□□□ -0.38
SMN2-210ENST00000511812 IGHV7-4-1A0A0J9YVY3 117 aa12.65□□□□□ -0.38
SMN2-210ENST00000511812 LINC00854A0A1B0GVQ3 168 aa12.65□□□□□ -0.38
SMN2-210ENST00000511812 TSPAN4O14817 238 aa12.65□□□□□ -0.38
SMN2-210ENST00000511812 CLN5O75503 358 aa12.65□□□□□ -0.38
SMN2-210ENST00000511812 TMEM50AO95807 157 aa12.65□□□□□ -0.38
SMN2-210ENST00000511812 TNFRSF9Q07011 255 aa12.65□□□□□ -0.38
SMN2-210ENST00000511812 BAK1Q16611 211 aa12.65□□□□□ -0.38
SMN2-210ENST00000511812 NMSQ5H8A3 153 aa12.65□□□□□ -0.38
SMN2-210ENST00000511812 ETFRF1Q6IPR1 90 aa12.65□□□□□ -0.38
SMN2-210ENST00000511812 OR4X1Q8NH49 305 aa12.65□□□□□ -0.38
SMN2-210ENST00000511812 RNASEH2CQ8TDP1 164 aaKnown RBP12.65□□□□□ -0.38
SMN2-210ENST00000511812 OR10C1Q96KK4 312 aa12.65□□□□□ -0.38
SMN2-210ENST00000511812 RHPN1-AS1Q9BWJ2 59 aa12.65□□□□□ -0.38
SMN2-210ENST00000511812 WFDC10AQ9H1F0 79 aa12.65□□□□□ -0.38
SMN2-210ENST00000511812 FNDC4Q9H6D8 234 aaPredicted RBP12.65□□□□□ -0.38
SMN2-210ENST00000511812 TRAV30A0A087WSZ9 112 aa12.64□□□□□ -0.39
SMN2-210ENST00000511812 A0A1B0GU03 582 aa12.64□□□□□ -0.39
SMN2-210ENST00000511812 SFT2D2O95562 160 aa12.64□□□□□ -0.39
SMN2-210ENST00000511812 IFNA10P01566 189 aa12.64□□□□□ -0.39
SMN2-210ENST00000511812 SLC25A4P12235 298 aa12.64□□□□□ -0.39
SMN2-210ENST00000511812 NPY1RP25929 384 aa12.64□□□□□ -0.39
SMN2-210ENST00000511812 TOMM20LQ6UXN7 152 aa12.64□□□□□ -0.39
SMN2-210ENST00000511812 PUS1Q9Y606 427 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMN2-210ENST00000511812 U3KQ87 197 aa12.64□□□□□ -0.39
SMN2-210ENST00000511812 IGHV3-49A0A0A0MS15 119 aa12.63□□□□□ -0.39
SMN2-210ENST00000511812 OR4C46A6NHA9 309 aa12.63□□□□□ -0.39
SMN2-210ENST00000511812 CHEK1O14757 476 aa12.63□□□□□ -0.39
SMN2-210ENST00000511812 UBE2MP61081 183 aaKnown RBP12.63□□□□□ -0.39
SMN2-210ENST00000511812 PPP1R1AQ13522 171 aa12.63□□□□□ -0.39
SMN2-210ENST00000511812 MLANAQ16655 118 aa12.63□□□□□ -0.39
SMN2-210ENST00000511812 DTD1Q8TEA8 209 aa12.63□□□□□ -0.39
SMN2-210ENST00000511812 RBKSQ9H477 322 aa12.63□□□□□ -0.39
SMN2-210ENST00000511812 HSPB7Q9UBY9 170 aa12.63□□□□□ -0.39
SMN2-210ENST00000511812 LRTM2Q8N967 370 aa12.62□□□□□ -0.39
SMN2-210ENST00000511812 RNF2Q99496 336 aa12.62□□□□□ -0.39
SMN2-210ENST00000511812 C7orf50Q9BRJ6 194 aaKnown RBP12.62□□□□□ -0.39
SMN2-210ENST00000511812 TMED3Q9Y3Q3 217 aa12.62□□□□□ -0.39
SMN2-210ENST00000511812 IGHV3OR16-13A0A075B7E8 117 aa12.61□□□□□ -0.39
SMN2-210ENST00000511812 IGHV3-74A0A0B4J1X5 117 aa12.61□□□□□ -0.39
SMN2-210ENST00000511812 RBMY1BA6NDE4 496 aaKnown RBP12.61□□□□□ -0.39
SMN2-210ENST00000511812 RBMY1EA6NEQ0 496 aaKnown RBP12.61□□□□□ -0.39
SMN2-210ENST00000511812 NDUFB6O95139 128 aa12.61□□□□□ -0.39
SMN2-210ENST00000511812 CD5P06127 495 aa12.61□□□□□ -0.39
SMN2-210ENST00000511812 RBMY1DP0C7P1 496 aaKnown RBP12.61□□□□□ -0.39
SMN2-210ENST00000511812 RND2P52198 227 aa12.61□□□□□ -0.39
SMN2-210ENST00000511812 LINC00322Q6ZN03 302 aaPredicted RBP12.61□□□□□ -0.39
SMN2-210ENST00000511812 OR1S2Q8NGQ3 325 aa12.61□□□□□ -0.39
SMN2-210ENST00000511812 NARS2Q96I59 477 aaKnown RBP12.61□□□□□ -0.39
SMN2-210ENST00000511812 ZNF414Q96IQ9 312 aa12.61□□□□□ -0.39
SMN2-210ENST00000511812 TMEM231Q9H6L2 316 aa12.61□□□□□ -0.39
SMN2-210ENST00000511812 MRPL36Q9P0J6 103 aaKnown RBP12.61□□□□□ -0.39
SMN2-210ENST00000511812 UBQLN2Q9UHD9 624 aa12.61□□□□□ -0.39
SMN2-210ENST00000511812 A0A1W2PS18 150 aa12.6□□□□□ -0.39
SMN2-210ENST00000511812 MED6O75586 246 aa12.6□□□□□ -0.39
SMN2-210ENST00000511812 IFNA4P05014 189 aa12.6□□□□□ -0.39
SMN2-210ENST00000511812 HOXB5P09067 269 aa12.6□□□□□ -0.39
SMN2-210ENST00000511812 SLC25A6P12236 298 aa12.6□□□□□ -0.39
SMN2-210ENST00000511812 IL7P13232 177 aa12.6□□□□□ -0.39
SMN2-210ENST00000511812 NPPCP23582 126 aa12.6□□□□□ -0.39
SMN2-210ENST00000511812 ATP5IP56385 69 aaPredicted RBP12.6□□□□□ -0.39
SMN2-210ENST00000511812 PAFAH1B2P68402 229 aa12.6□□□□□ -0.39
SMN2-210ENST00000511812 TIGITQ495A1 244 aa12.6□□□□□ -0.39
SMN2-210ENST00000511812 PRSS54Q6PEW0 395 aa12.6□□□□□ -0.39
SMN2-210ENST00000511812 METTL26Q96S19 204 aa12.6□□□□□ -0.39
SMN2-210ENST00000511812 SDHCQ99643 169 aaPredicted RBP12.6□□□□□ -0.39
SMN2-210ENST00000511812 ZFAND3Q9H8U3 227 aa12.6□□□□□ -0.39
SMN2-210ENST00000511812 IGKV3-7A0A075B6H7 116 aa12.59□□□□□ -0.39
SMN2-210ENST00000511812 LOC102724200A0A096LPH7 203 aaPredicted RBP12.59□□□□□ -0.39
SMN2-210ENST00000511812 FAM90A26D6RGX4 464 aa12.59□□□□□ -0.39
SMN2-210ENST00000511812 OR10J1P30954 320 aa12.59□□□□□ -0.39
SMN2-210ENST00000511812 TFPI2P48307 235 aa12.59□□□□□ -0.39
SMN2-210ENST00000511812 CMC4P56277 68 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 194.3 ms