RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 TSPO2Q5TGU0 170 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 TMEM136Q6ZRR5 245 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 SSX8Q7RTT4 187 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 FAM219AQ8IW50 185 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 NPWQ8N729 165 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 SUMF1Q8NBK3 374 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 ZNF740Q8NDX6 193 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 OR5D14Q8NGL3 314 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 OR2AJ1Q8NGZ0 328 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 BAALCQ8WXS3 180 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 TMEM190Q8WZ59 177 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 FGF14Q92915 247 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 C10orf35Q96D05 121 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 PGLYRP3Q96LB9 341 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 MCHR1Q99705 422 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 HSD17B10Q99714 261 aaKnown RBP3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 RARRES2Q99969 163 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 PLA2G2FQ9BZM2 168 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 SCRT2Q9NQ03 307 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 PRNDQ9UKY0 176 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 POLR1DQ9Y2S0 133 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 ALPK3Q96L96 1907 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 RALGAPA2Q2PPJ7 1873 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 SCN8AQ9UQD0 1980 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 PCNTO95613 3336 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 TRAV5A0A0B4J249 113 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 A0A0B4J2E0 115 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 PIGBOS1A0A0B4J2F0 54 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 A0A1B0GV50 99 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 A0A1B0GX12 115 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 CEACAM18A8MTB9 384 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 ZNF732B4DXR9 585 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 CCDC179H3BU77 68 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 SYS1-DBNDD2H3BUS1 97 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 K7EN84 100 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 CRXO43186 299 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 GAS8-AS1O95177 125 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 NCR2O95944 276 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 TSHBP01222 138 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 IGLV3-19P01714 112 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 HPNP05981 417 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 CFC1BP0CG36 223 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 CFC1P0CG37 223 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 SMIM13P0DJ93 91 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 IGLL1P15814 213 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 MDKP21741 143 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 VDAC1P21796 283 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 CA6P23280 308 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 CNTFRP26992 372 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 SFTPDP35247 375 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 XGP55808 180 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 RBM11P57052 281 aaKnown RBP3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 GNG5P63218 68 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 RPS21P63220 83 aaKnown RBP3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 IL15RAQ13261 267 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 CDK5R1Q15078 307 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 Q499Y3 187 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 LYSMD4Q5XG99 296 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 ZNF550Q7Z398 422 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 OOSP2Q86WS3 158 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 OR9G1Q8NH87 305 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 OR1F12Q8NHA8 337 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 PPDPFLQ8WWR9 84 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 TMEM101Q96IK0 257 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 ABHD14BQ96IU4 210 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 RASL11BQ9BPW5 248 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 SFXN3Q9BWM7 321 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 GNB1LQ9BYB4 327 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 ULBP3Q9BZM4 244 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 B9D1Q9UPM9 204 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 INSIG2Q9Y5U4 225 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 ANKRD12Q6UB98 2062 aa3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 TDRD15B5MCY1 1934 aaKnown RBP3.72□□□□□ -1.81
HMGB3P13-201ENST00000511263 CCDC88CQ9P219 2028 aa3.71□□□□□ -1.81
HMGB3P13-201ENST00000511263 COL4A4P53420 1690 aaPredicted RBP3.71□□□□□ -1.81
HMGB3P13-201ENST00000511263 TRAV24A0A0B4J272 114 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 LOC102725191A0A1B0GVB3 256 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 C2CD4DB7Z1M9 353 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 J3QRE1 110 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 ZNF737O75373 536 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 KLF7O75840 302 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 NDUFA7O95182 113 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 MT-ATP8P03928 68 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 H2BFMP0C1H6 154 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 PATE4P0C8F1 98 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 SP9P0CG40 484 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 COX8AP10176 69 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 ZNF708P17019 499 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 SPINT3P49223 89 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 PSMB3P49720 205 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 CLDN6P56747 220 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 RPL23P62829 140 aaKnown RBP3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 CX3CL1P78423 397 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 KLRB1Q12918 225 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 INSL4Q14641 139 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 CD226Q15762 336 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 MLF2Q15773 248 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 IGFBP7Q16270 282 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 GGTA1PQ4G0N0 100 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 C1orf195Q5TG92 126 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms