RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 ZNF773Q6PK81 442 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 LCN15Q6UWW0 184 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 FOXI2Q6ZQN5 318 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 TCF23Q7RTU1 214 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 POM121L12Q8N7R1 296 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 MRPL30Q8TCC3 161 aaKnown RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 ACY3Q96HD9 319 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 C1orf147Q96MC9 270 aaPredicted RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 BCL7BQ9BQE9 202 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 TM2D3Q9BRN9 247 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 CDIP1Q9H305 208 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 HIGD1AQ9Y241 93 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 F11RQ9Y624 299 aaKnown RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 LYSTQ99698 3801 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 IGKV3-7A0A075B6H7 116 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 TRAV6A0A075B6T7 132 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 BORCS7-ASMTA0A0B4J1R7 106 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 A8MWP6 167 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 F8W735 103 aaPredicted RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 RGS13O14921 159 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 AMY2AP04746 511 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 DUX4L4P0CJ87 422 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 CT45A10P0DMU9 189 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 M6PRP20645 277 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 P2RY1P47900 373 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 IRF3Q14653 427 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 MRPL23Q16540 153 aaKnown RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 ATP6V1FQ16864 119 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 DEFB136Q30KP8 78 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 ACOT6Q3I5F7 207 aaPredicted RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 CD300EQ496F6 205 aaPredicted RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 OR2B11Q5JQS5 317 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 TMEM78Q5T7P6 136 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 GLDNQ6ZMI3 551 aaPredicted RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 BPIFA4PQ86YQ2 179 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 CLVS1Q8IUQ0 354 aaPredicted RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 H1FOOQ8IZA3 346 aaPredicted RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 LINC00528Q8N1L1 170 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 RXFP4Q8TDU9 374 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 IL22RA2Q969J5 263 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 BORCS7Q96B45 105 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 KCNS1Q96KK3 526 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 SLC25A21Q9BQT8 299 aaPredicted RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 ZNF2Q9BSG1 426 aaPredicted RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 ISG20L2Q9H9L3 353 aaKnown RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 DYNC2H1Q8NCM8 4307 aaKnown RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 CUBNO60494 3623 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 MEX3AA1L020 520 aaKnown RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 XKRY2A2RUG3 117 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 ZNF98A6NK75 572 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 I3L521 148 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 RCC1P18754 421 aaPredicted RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 CXCL2P19875 107 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 DUTP33316 252 aaKnown RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 RPL5P46777 297 aaKnown RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 RFX2P48378 723 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 YPEL3P61236 119 aaPredicted RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 LYZP61626 148 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 FAM90A2PQ658T7 463 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 LYPD4Q6UWN0 246 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 TMEM144Q7Z5S9 345 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 LINC00469Q8N7U9 141 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 SAMD12Q8N8I0 201 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 TMEM104Q8NE00 496 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 OR13C8Q8NGS7 320 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 GNPNAT1Q96EK6 184 aaPredicted RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 ST6GAL2Q96JF0 529 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 CNBD2Q96M20 576 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 DUX3Q96PT4 197 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 LSM4Q9Y4Z0 139 aaKnown RBP2.19□□□□□ -2.06
CLOCK-209ENST00000511124 VPS13CQ709C8 3753 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 DNAH1Q9P2D7 4330 aa2.19□□□□□ -2.06
CLOCK-209ENST00000511124 CSMD3Q7Z407 3707 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 ELOA3CA0A087WX78 387 aaPredicted RBP2.18□□□□□ -2.06
CLOCK-209ENST00000511124 A0A1W2PPQ1 181 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 TMEM14DPA8MWL7 114 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 H7BYZ3 331 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 CLN5O75503 358 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 SC5DO75845 299 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 HLA-DQB1P01920 261 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 S100A4P26447 101 aaKnown RBP2.18□□□□□ -2.06
CLOCK-209ENST00000511124 OR10J1P30954 320 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 HRH1P35367 487 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 SUPT4H1P63272 117 aaKnown RBP2.18□□□□□ -2.06
CLOCK-209ENST00000511124 POU2AF1Q16633 256 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 RSPO1Q2MKA7 263 aaPredicted RBP2.18□□□□□ -2.06
CLOCK-209ENST00000511124 DEFB135Q30KP9 77 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 SIGLEC15Q6ZMC9 328 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 HOGA1Q86XE5 327 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 Q8N6K4 173 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 OR52I2Q8NH67 350 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 LHFPL5Q8TAF8 219 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 LGALS14Q8TCE9 139 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 ZNRF4Q8WWF5 429 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 C16orf74Q96GX8 76 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 TMPRSS5Q9H3S3 457 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 ICOSQ9Y6W8 199 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 STAB1Q9NY15 2570 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 TRGV4A0A0C4DH28 118 aa2.18□□□□□ -2.06
CLOCK-209ENST00000511124 A0A1W2PPV4 95 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms