RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 ENY2Q9NPA8 101 aa6.07□□□□□ -1.44
TRIO-217ENST00000511019 TRAV30A0A087WSZ9 112 aa6.06□□□□□ -1.44
TRIO-217ENST00000511019 A0A0B4J293 547 aa6.06□□□□□ -1.44
TRIO-217ENST00000511019 IGHV4-28A0A0C4DH34 117 aa6.06□□□□□ -1.44
TRIO-217ENST00000511019 K7EQG2 157 aa6.06□□□□□ -1.44
TRIO-217ENST00000511019 CLN5O75503 358 aa6.06□□□□□ -1.44
TRIO-217ENST00000511019 APOA1P02647 267 aa6.06□□□□□ -1.44
TRIO-217ENST00000511019 RBMY1A1P0DJD3 496 aaKnown RBP6.06□□□□□ -1.44
TRIO-217ENST00000511019 RBMY1CP0DJD4 496 aa6.06□□□□□ -1.44
TRIO-217ENST00000511019 SPP1P10451 314 aa6.06□□□□□ -1.44
TRIO-217ENST00000511019 HLA-DMBP28068 263 aa6.06□□□□□ -1.44
TRIO-217ENST00000511019 RBMY1FQ15415 496 aaKnown RBP6.06□□□□□ -1.44
TRIO-217ENST00000511019 PVRIGQ6DKI7 326 aa6.06□□□□□ -1.44
TRIO-217ENST00000511019 TRPT1Q86TN4 253 aaKnown RBP6.06□□□□□ -1.44
TRIO-217ENST00000511019 Q8NAQ8 132 aa6.06□□□□□ -1.44
TRIO-217ENST00000511019 STXBP6Q8NFX7 210 aa6.06□□□□□ -1.44
TRIO-217ENST00000511019 YIPF6Q96EC8 236 aa6.06□□□□□ -1.44
TRIO-217ENST00000511019 ZNF486Q96H40 463 aaPredicted RBP6.06□□□□□ -1.44
TRIO-217ENST00000511019 VCX3AQ9NNX9 186 aa6.06□□□□□ -1.44
TRIO-217ENST00000511019 ALMS1Q8TCU4 4167 aa6.06□□□□□ -1.44
TRIO-217ENST00000511019 TRAV10A0A0B4J240 114 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 C3orf85A0A1B0GTC6 90 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 KNCNA6PVL3 124 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 M0QYG6 137 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 IGKV1-5P01602 117 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 GIG44P09565 113 aaPredicted RBP6.05□□□□□ -1.44
TRIO-217ENST00000511019 ZNF688P0C7X2 276 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 RNASE2P10153 161 aaKnown RBP6.05□□□□□ -1.44
TRIO-217ENST00000511019 PI3P19957 117 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 CRYBB3P26998 211 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 OPRK1P41145 380 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 RPL5P46777 297 aaKnown RBP6.05□□□□□ -1.44
TRIO-217ENST00000511019 P2RY1P47900 373 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 EIF2B2P49770 351 aaKnown RBP6.05□□□□□ -1.44
TRIO-217ENST00000511019 AKR1C2P52895 323 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 PPP5CP53041 499 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 AP2S1P53680 142 aaPredicted RBP6.05□□□□□ -1.44
TRIO-217ENST00000511019 PIGPP57054 158 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 RND3P61587 244 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 TRIM16LQ309B1 348 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 RNASE10Q5GAN6 216 aaKnown RBP6.05□□□□□ -1.44
TRIO-217ENST00000511019 ACTL10Q5JWF8 245 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 OR4X1Q8NH49 305 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 Q8WTZ3 238 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 RRNAD1Q96FB5 475 aaKnown RBP6.05□□□□□ -1.44
TRIO-217ENST00000511019 RAB40CQ96S21 281 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 TP53RKQ96S44 253 aa6.05□□□□□ -1.44
TRIO-217ENST00000511019 A0A087WXM4 84 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 RPS10-NUDT3A0A1W2PQS6 291 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 HELTA6NFD8 242 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 ZNF705EA8MWA4 302 aaPredicted RBP6.04□□□□□ -1.44
TRIO-217ENST00000511019 FAM25AB3EWG3 89 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 FAM25CB3EWG5 89 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 FAM25GB3EWG6 89 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 HPGDSO60760 199 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 ELK1P19419 428 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 HOXA1P49639 335 aaPredicted RBP6.04□□□□□ -1.44
TRIO-217ENST00000511019 NUTF2P61970 127 aaKnown RBP6.04□□□□□ -1.44
TRIO-217ENST00000511019 DHRS2Q13268 280 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 SP6Q3SY56 376 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 TIGITQ495A1 244 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 LINC00336Q6ZUF6 198 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 RNASE11Q8TAA1 199 aaKnown RBP6.04□□□□□ -1.44
TRIO-217ENST00000511019 ZFAND1Q8TCF1 268 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 FNDC4Q9H6D8 234 aaPredicted RBP6.04□□□□□ -1.44
TRIO-217ENST00000511019 CLEC5AQ9NY25 188 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 MRPL36Q9P0J6 103 aaKnown RBP6.04□□□□□ -1.44
TRIO-217ENST00000511019 COPZ2Q9P299 210 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 KLK11Q9UBX7 282 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 TBC1D24Q9ULP9 559 aa6.04□□□□□ -1.44
TRIO-217ENST00000511019 IGHV4-4A0A075B6R2 117 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 ELOA3CA0A087WX78 387 aaPredicted RBP6.03□□□□□ -1.44
TRIO-217ENST00000511019 CD3DP04234 171 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 P0C879 139 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 NPY1RP25929 384 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 HTR2BP41595 481 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 RORCP51449 518 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 SPCS3P61009 180 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 RNASE12Q5GAN4 147 aaKnown RBP6.03□□□□□ -1.44
TRIO-217ENST00000511019 MZT2AQ6P582 158 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 C16orf54Q6UWD8 224 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 Q6ZTC4 211 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 LHFPL1Q86WI0 220 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 ARRDC1Q8N5I2 433 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 CCDC71LQ8N9Z2 235 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 CSNK1G2-AS1Q8NCQ2 148 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 TERB2Q8NHR7 220 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 DCANP1Q8TF63 244 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 RNF126Q9BV68 326 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 C1QTNF4Q9BXJ3 329 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 HEYLQ9NQ87 328 aaPredicted RBP6.03□□□□□ -1.44
TRIO-217ENST00000511019 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.03□□□□□ -1.44
TRIO-217ENST00000511019 X6R8D5 127 aa6.03□□□□□ -1.44
TRIO-217ENST00000511019 DEFB131BA0A096LNP1 70 aa6.02□□□□□ -1.45
TRIO-217ENST00000511019 B3GALNT1O75752 331 aa6.02□□□□□ -1.45
TRIO-217ENST00000511019 IGKV1-17P01599 117 aa6.02□□□□□ -1.45
TRIO-217ENST00000511019 HNRNPCP07910 306 aaKnown RBP eCLIP6.02□□□□□ -1.456e-8■■■□□ 15.5
TRIO-217ENST00000511019 P0DMU3 169 aa6.02□□□□□ -1.45
TRIO-217ENST00000511019 FAM231AP0DMU4 169 aa6.02□□□□□ -1.45
TRIO-217ENST00000511019 FAM231CP0DMU5 169 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms