RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 IGHV3-74A0A0B4J1X5 117 aa13.29□□□□□ -0.28
TPM3-220ENST00000509601 LCE6AA0A183 80 aa13.29□□□□□ -0.28
TPM3-220ENST00000509601 APOHP02749 345 aaPredicted RBP13.29□□□□□ -0.28
TPM3-220ENST00000509601 SUB1P53999 127 aaKnown RBP eCLIP13.29□□□□□ -0.28
TPM3-220ENST00000509601 SPCS3P61009 180 aa13.29□□□□□ -0.28
TPM3-220ENST00000509601 RBPMSQ93062 196 aaKnown RBP13.29□□□□□ -0.28
TPM3-220ENST00000509601 TMEM230Q96A57 120 aa13.29□□□□□ -0.28
TPM3-220ENST00000509601 PRRT1Q99946 306 aa13.29□□□□□ -0.28
TPM3-220ENST00000509601 PDCD10Q9BUL8 212 aa13.29□□□□□ -0.28
TPM3-220ENST00000509601 RSL24D1Q9UHA3 163 aaKnown RBP13.29□□□□□ -0.28
TPM3-220ENST00000509601 TMEM56-RWDD3S4R434 201 aa13.29□□□□□ -0.28
TPM3-220ENST00000509601 A0A1B0GU03 582 aa13.28□□□□□ -0.28
TPM3-220ENST00000509601 FABP12A6NFH5 140 aa13.28□□□□□ -0.28
TPM3-220ENST00000509601 OR4C46A6NHA9 309 aa13.28□□□□□ -0.28
TPM3-220ENST00000509601 HOXA1P49639 335 aaPredicted RBP13.28□□□□□ -0.28
TPM3-220ENST00000509601 VSIRQ9H7M9 311 aa13.28□□□□□ -0.28
TPM3-220ENST00000509601 ZFAND3Q9H8U3 227 aa13.28□□□□□ -0.28
TPM3-220ENST00000509601 ALMS1Q8TCU4 4167 aa13.28□□□□□ -0.28
TPM3-220ENST00000509601 EPPK1P58107 5090 aaKnown RBP13.27□□□□□ -0.28
TPM3-220ENST00000509601 CORTO00230 105 aa13.27□□□□□ -0.29
TPM3-220ENST00000509601 TMEM187Q14656 261 aa13.27□□□□□ -0.29
TPM3-220ENST00000509601 TMEM268Q5VZI3 342 aa13.27□□□□□ -0.29
TPM3-220ENST00000509601 ZNF600Q6ZNG1 722 aa13.27□□□□□ -0.29
TPM3-220ENST00000509601 RNASE11Q8TAA1 199 aaKnown RBP13.27□□□□□ -0.29
TPM3-220ENST00000509601 ENY2Q9NPA8 101 aa13.27□□□□□ -0.29
TPM3-220ENST00000509601 PUS1Q9Y606 427 aaKnown RBP eCLIP13.27□□□□□ -0.29
TPM3-220ENST00000509601 CLN5O75503 358 aa13.26□□□□□ -0.29
TPM3-220ENST00000509601 ZNF124Q15973 351 aa13.26□□□□□ -0.29
TPM3-220ENST00000509601 Q6ZWC4 215 aa13.26□□□□□ -0.29
TPM3-220ENST00000509601 WFDC3Q8IUB2 231 aa13.26□□□□□ -0.29
TPM3-220ENST00000509601 APRG1Q8IVJ8 170 aa13.26□□□□□ -0.29
TPM3-220ENST00000509601 OR4X1Q8NH49 305 aa13.26□□□□□ -0.29
TPM3-220ENST00000509601 MCFD2Q8NI22 146 aa13.26□□□□□ -0.29
TPM3-220ENST00000509601 IL17DQ8TAD2 202 aa13.26□□□□□ -0.29
TPM3-220ENST00000509601 TMEM170AQ8WVE7 144 aa13.26□□□□□ -0.29
TPM3-220ENST00000509601 ST8SIA2Q92186 375 aa13.26□□□□□ -0.29
TPM3-220ENST00000509601 GALNT14Q96FL9 552 aa13.26□□□□□ -0.29
TPM3-220ENST00000509601 PRR13Q9NZ81 148 aa13.26□□□□□ -0.29
TPM3-220ENST00000509601 CACNG5Q9UF02 275 aa13.26□□□□□ -0.29
TPM3-220ENST00000509601 SCP2D1Q9UJQ7 156 aa13.26□□□□□ -0.29
TPM3-220ENST00000509601 IGKV3-7A0A075B6H7 116 aa13.25□□□□□ -0.29
TPM3-220ENST00000509601 HTR2BP41595 481 aa13.25□□□□□ -0.29
TPM3-220ENST00000509601 TFPI2P48307 235 aa13.25□□□□□ -0.29
TPM3-220ENST00000509601 TCF24Q7RTU0 167 aa13.25□□□□□ -0.29
TPM3-220ENST00000509601 GINS3Q9BRX5 216 aa13.25□□□□□ -0.29
TPM3-220ENST00000509601 KCNIP3Q9Y2W7 256 aa13.25□□□□□ -0.29
TPM3-220ENST00000509601 IGHV3-66A0A0C4DH42 116 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 KIR2DL5BA0A0G2JN68 375 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 KIR2DL5BA0A0G2JPC4 375 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 UBE2CO00762 179 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 SPRY2O43597 315 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 DFFBO76075 338 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 RPL35AP18077 110 aaKnown RBP13.24□□□□□ -0.29
TPM3-220ENST00000509601 OPRK1P41145 380 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 APOC4P55056 127 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 SUPT4H1P63272 117 aaKnown RBP13.24□□□□□ -0.29
TPM3-220ENST00000509601 C2orf83Q53S99 150 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 KIR2DL5AQ8N109 375 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 GBGT1Q8N5D6 347 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 KIR2DL5BQ8NHK3 375 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 IL22RA2Q969J5 263 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 SCGB3A2Q96PL1 93 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 MAP6D1Q9H9H5 199 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 HEYLQ9NQ87 328 aaPredicted RBP13.24□□□□□ -0.29
TPM3-220ENST00000509601 TP53TG1Q9Y2A0 90 aa13.24□□□□□ -0.29
TPM3-220ENST00000509601 NOL3O60936 208 aaKnown RBP13.23□□□□□ -0.29
TPM3-220ENST00000509601 IGKV1-17P01599 117 aa13.23□□□□□ -0.29
TPM3-220ENST00000509601 CMC4P56277 68 aaPredicted RBP13.23□□□□□ -0.29
TPM3-220ENST00000509601 KLF9Q13886 244 aaPredicted RBP13.23□□□□□ -0.29
TPM3-220ENST00000509601 RNF183Q96D59 192 aa13.23□□□□□ -0.29
TPM3-220ENST00000509601 MCUBQ9NWR8 336 aa13.23□□□□□ -0.29
TPM3-220ENST00000509601 CD5P06127 495 aa13.22□□□□□ -0.29
TPM3-220ENST00000509601 AKR1C4P17516 323 aa13.22□□□□□ -0.29
TPM3-220ENST00000509601 EWSR1Q01844 656 aaKnown RBP eCLIP13.22□□□□□ -0.29
TPM3-220ENST00000509601 DEFB135Q30KP9 77 aa13.22□□□□□ -0.29
TPM3-220ENST00000509601 TIGITQ495A1 244 aa13.22□□□□□ -0.29
TPM3-220ENST00000509601 NMSQ5H8A3 153 aa13.22□□□□□ -0.29
TPM3-220ENST00000509601 PRSS54Q6PEW0 395 aa13.22□□□□□ -0.29
TPM3-220ENST00000509601 LYZL2Q7Z4W2 148 aa13.22□□□□□ -0.29
TPM3-220ENST00000509601 STPG3Q8N7X2 389 aa13.22□□□□□ -0.29
TPM3-220ENST00000509601 MS4A6AQ9H2W1 248 aa13.22□□□□□ -0.29
TPM3-220ENST00000509601 V9GYH0 126 aa13.22□□□□□ -0.29
TPM3-220ENST00000509601 A0A0B4J2A0 478 aa13.21□□□□□ -0.29
TPM3-220ENST00000509601 CEBPZOSA8MTT3 80 aa13.21□□□□□ -0.29
TPM3-220ENST00000509601 SULT1A3P0DMM9 295 aa13.21□□□□□ -0.29
TPM3-220ENST00000509601 SULT1A4P0DMN0 295 aa13.21□□□□□ -0.29
TPM3-220ENST00000509601 NPPCP23582 126 aa13.21□□□□□ -0.29
TPM3-220ENST00000509601 CRYBB3P26998 211 aa13.21□□□□□ -0.29
TPM3-220ENST00000509601 BMI1P35226 326 aa13.21□□□□□ -0.29
TPM3-220ENST00000509601 RNASEH2CQ8TDP1 164 aaKnown RBP13.21□□□□□ -0.29
TPM3-220ENST00000509601 TRIM63Q969Q1 353 aa13.21□□□□□ -0.29
TPM3-220ENST00000509601 SHPKQ9UHJ6 478 aa13.21□□□□□ -0.29
TPM3-220ENST00000509601 TRAV30A0A087WSZ9 112 aa13.2□□□□□ -0.3
TPM3-220ENST00000509601 NXPH3O95157 252 aa13.2□□□□□ -0.3
TPM3-220ENST00000509601 IGLC1P0CG04 106 aa13.2□□□□□ -0.3
TPM3-220ENST00000509601 PAFAH1B2P68402 229 aa13.2□□□□□ -0.3
TPM3-220ENST00000509601 TNFRSF9Q07011 255 aa13.2□□□□□ -0.3
TPM3-220ENST00000509601 ZNF79Q15937 498 aa13.2□□□□□ -0.3
TPM3-220ENST00000509601 FAM24BQ8N5W8 94 aa13.2□□□□□ -0.3
TPM3-220ENST00000509601 SLC24A4Q8NFF2 622 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms