RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 DUX3Q96PT4 197 aa11.47□□□□□ -0.57
RNF4-213ENST00000509388 TXN2Q99757 166 aa11.47□□□□□ -0.57
RNF4-213ENST00000509388 GNG7O60262 68 aa11.46□□□□□ -0.57
RNF4-213ENST00000509388 MPC2O95563 127 aa11.46□□□□□ -0.57
RNF4-213ENST00000509388 METTL15P1P0C7V9 234 aa11.46□□□□□ -0.57
RNF4-213ENST00000509388 ZP3P21754 424 aa11.46□□□□□ -0.57
RNF4-213ENST00000509388 GPR183P32249 361 aa11.46□□□□□ -0.57
RNF4-213ENST00000509388 ARL3P36405 182 aa11.46□□□□□ -0.57
RNF4-213ENST00000509388 GPX4P36969 197 aaPredicted RBP11.46□□□□□ -0.57
RNF4-213ENST00000509388 RAP2BP61225 183 aa11.46□□□□□ -0.57
RNF4-213ENST00000509388 CD69Q07108 199 aa11.46□□□□□ -0.57
RNF4-213ENST00000509388 OR8G2PQ6IF36 304 aa11.46□□□□□ -0.57
RNF4-213ENST00000509388 OR10P1Q8NGE3 313 aa11.46□□□□□ -0.57
RNF4-213ENST00000509388 WDR89Q96FK6 387 aaPredicted RBP11.46□□□□□ -0.57
RNF4-213ENST00000509388 RAX2Q96IS3 184 aa11.46□□□□□ -0.57
RNF4-213ENST00000509388 SLC35E1Q96K37 410 aa11.46□□□□□ -0.57
RNF4-213ENST00000509388 hCG_2014768A0A024R1R8 64 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 IGHV4OR15-8A0A075B7B6 117 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 A0A087WW49 117 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 FAM24AA6NFZ4 105 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 OR2T8A6NH00 312 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 NUPL2O15504 423 aaKnown RBP11.45□□□□□ -0.58
RNF4-213ENST00000509388 GGCTO75223 188 aaKnown RBP11.45□□□□□ -0.58
RNF4-213ENST00000509388 SCAF4O95104 1147 aaKnown RBP11.45□□□□□ -0.58
RNF4-213ENST00000509388 MLANAQ16655 118 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 RPEL1Q2QD12 228 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 PRSS54Q6PEW0 395 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 TMEM14EPQ6UXP3 125 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 SLC16A13Q7RTY0 426 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 STX12Q86Y82 276 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 CACNG8Q8WXS5 425 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 DCUN1D4Q92564 292 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 BSCL2Q96G97 398 aaPredicted RBP11.45□□□□□ -0.58
RNF4-213ENST00000509388 ACY3Q96HD9 319 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 CCDC140Q96MF4 163 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 ATP6V0BQ99437 205 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 SLC25A31Q9H0C2 315 aa11.45□□□□□ -0.58
RNF4-213ENST00000509388 FNDC4Q9H6D8 234 aaPredicted RBP11.45□□□□□ -0.58
RNF4-213ENST00000509388 LYRM2Q9NU23 88 aaPredicted RBP11.45□□□□□ -0.58
RNF4-213ENST00000509388 PPP5D1E7EU14 171 aa11.44□□□□□ -0.58
RNF4-213ENST00000509388 TRBV12-3P01733 135 aa11.44□□□□□ -0.58
RNF4-213ENST00000509388 P2RY1P47900 373 aa11.44□□□□□ -0.58
RNF4-213ENST00000509388 SPSB3Q6PJ21 355 aa11.44□□□□□ -0.58
RNF4-213ENST00000509388 OR4X1Q8NH49 305 aa11.44□□□□□ -0.58
RNF4-213ENST00000509388 ZC4H2Q9NQZ6 224 aa11.44□□□□□ -0.58
RNF4-213ENST00000509388 OR5AC2Q9NZP5 309 aa11.44□□□□□ -0.58
RNF4-213ENST00000509388 TRAV30A0A087WSZ9 112 aa11.43□□□□□ -0.58
RNF4-213ENST00000509388 SMCO3A2RU48 225 aa11.43□□□□□ -0.58
RNF4-213ENST00000509388 H0YIZ8 118 aa11.43□□□□□ -0.58
RNF4-213ENST00000509388 TGOLN2O43493 480 aa11.43□□□□□ -0.58
RNF4-213ENST00000509388 CLN5O75503 358 aa11.43□□□□□ -0.58
RNF4-213ENST00000509388 TSPAN15O95858 294 aa11.43□□□□□ -0.58
RNF4-213ENST00000509388 HOXD3P31249 432 aaPredicted RBP11.43□□□□□ -0.58
RNF4-213ENST00000509388 FCGR2BP31994 310 aaPredicted RBP11.43□□□□□ -0.58
RNF4-213ENST00000509388 NUP62P37198 522 aaPredicted RBP11.43□□□□□ -0.58
RNF4-213ENST00000509388 RND2P52198 227 aa11.43□□□□□ -0.58
RNF4-213ENST00000509388 TMEM252Q8N6L7 170 aa11.43□□□□□ -0.58
RNF4-213ENST00000509388 OR2T35Q8NGX2 323 aa11.43□□□□□ -0.58
RNF4-213ENST00000509388 MBD2Q9UBB5 411 aa11.43□□□□□ -0.58
RNF4-213ENST00000509388 BMPR1BO00238 502 aa11.42□□□□□ -0.58
RNF4-213ENST00000509388 CST7O76096 145 aa11.42□□□□□ -0.58
RNF4-213ENST00000509388 OR2C1O95371 312 aa11.42□□□□□ -0.58
RNF4-213ENST00000509388 SULT1A1P50225 295 aa11.42□□□□□ -0.58
RNF4-213ENST00000509388 SLURP1P55000 103 aa11.42□□□□□ -0.58
RNF4-213ENST00000509388 HBG1P69891 147 aa11.42□□□□□ -0.58
RNF4-213ENST00000509388 HBG2P69892 147 aa11.42□□□□□ -0.58
RNF4-213ENST00000509388 AKR1C1Q04828 323 aa11.42□□□□□ -0.58
RNF4-213ENST00000509388 RELQ04864 619 aaPredicted RBP11.42□□□□□ -0.58
RNF4-213ENST00000509388 FAM106AQ4KMX7 169 aa11.42□□□□□ -0.58
RNF4-213ENST00000509388 TMEM217Q8N7C4 229 aa11.42□□□□□ -0.58
RNF4-213ENST00000509388 NPIPB3Q92617 1050 aa11.42□□□□□ -0.58
RNF4-213ENST00000509388 RNF126Q9BV68 326 aa11.42□□□□□ -0.58
RNF4-213ENST00000509388 C11orf1Q9H5F2 150 aa11.42□□□□□ -0.58
RNF4-213ENST00000509388 STAB1Q9NY15 2570 aa11.41□□□□□ -0.58
RNF4-213ENST00000509388 TENM1Q9UKZ4 2725 aa11.41□□□□□ -0.58
RNF4-213ENST00000509388 ZNF320A2RRD8 509 aa11.41□□□□□ -0.58
RNF4-213ENST00000509388 CTSGP08311 255 aa11.41□□□□□ -0.58
RNF4-213ENST00000509388 CD33P20138 364 aa11.41□□□□□ -0.58
RNF4-213ENST00000509388 S100A11P31949 105 aa11.41□□□□□ -0.58
RNF4-213ENST00000509388 SLC38A11Q08AI6 406 aa11.41□□□□□ -0.58
RNF4-213ENST00000509388 FHL3Q13643 280 aa11.41□□□□□ -0.58
RNF4-213ENST00000509388 GAMTQ14353 236 aa11.41□□□□□ -0.58
RNF4-213ENST00000509388 ACOT7LQ6ZUV0 252 aa11.41□□□□□ -0.58
RNF4-213ENST00000509388 LILRB2Q8N423 598 aa11.41□□□□□ -0.58
RNF4-213ENST00000509388 TMEM116Q8NCL8 245 aa11.41□□□□□ -0.58
RNF4-213ENST00000509388 CHAC2Q8WUX2 184 aa11.41□□□□□ -0.58
RNF4-213ENST00000509388 GGACTQ9BVM4 153 aa11.41□□□□□ -0.58
RNF4-213ENST00000509388 TRAV14DV4A0A0A6YYC5 116 aa11.4□□□□□ -0.58
RNF4-213ENST00000509388 IGSF23A1L1A6 192 aa11.4□□□□□ -0.58
RNF4-213ENST00000509388 ZFP92A6NM28 416 aa11.4□□□□□ -0.58
RNF4-213ENST00000509388 PMS2P5A8MQ11 134 aa11.4□□□□□ -0.58
RNF4-213ENST00000509388 F8W735 103 aaPredicted RBP11.4□□□□□ -0.58
RNF4-213ENST00000509388 CCNKO75909 580 aa11.4□□□□□ -0.58
RNF4-213ENST00000509388 YIF1AO95070 293 aa11.4□□□□□ -0.58
RNF4-213ENST00000509388 OR10J1P30954 320 aa11.4□□□□□ -0.58
RNF4-213ENST00000509388 SYNJ2BPP57105 145 aa11.4□□□□□ -0.58
RNF4-213ENST00000509388 DLK1P80370 383 aa11.4□□□□□ -0.58
RNF4-213ENST00000509388 EWSR1Q01844 656 aaKnown RBP eCLIP11.4□□□□□ -0.586e-6■□□□□ 9.2
RNF4-213ENST00000509388 BAXQ07812 192 aa11.4□□□□□ -0.58
RNF4-213ENST00000509388 GPHB5Q86YW7 130 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms