RNA–Protein interactions for RNA: ENST00000509220.1

COMMD8-202, Transcript of COMM domain containing 8, humanhuman

TSL 2

Gene COMMD8, Length 533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD8-202ENST00000509220 SRPXP78539 464 aa11.76□□□□□ -0.53
COMMD8-202ENST00000509220 SPANXN2Q5MJ10 180 aa11.76□□□□□ -0.53
COMMD8-202ENST00000509220 SHPKQ9UHJ6 478 aa11.76□□□□□ -0.53
COMMD8-202ENST00000509220 SMPXQ9UHP9 88 aa11.76□□□□□ -0.53
COMMD8-202ENST00000509220 IGHV3OR16-8A0A075B7F1 116 aa11.75□□□□□ -0.53
COMMD8-202ENST00000509220 IGHV7-4-1A0A0J9YVY3 117 aa11.75□□□□□ -0.53
COMMD8-202ENST00000509220 RBMY1BA6NDE4 496 aaKnown RBP11.75□□□□□ -0.53
COMMD8-202ENST00000509220 RBMY1EA6NEQ0 496 aaKnown RBP11.75□□□□□ -0.53
COMMD8-202ENST00000509220 YIF1AO95070 293 aa11.75□□□□□ -0.53
COMMD8-202ENST00000509220 TMEM50AO95807 157 aa11.75□□□□□ -0.53
COMMD8-202ENST00000509220 RBMY1DP0C7P1 496 aaKnown RBP11.75□□□□□ -0.53
COMMD8-202ENST00000509220 SULT1A3P0DMM9 295 aa11.75□□□□□ -0.53
COMMD8-202ENST00000509220 SULT1A4P0DMN0 295 aa11.75□□□□□ -0.53
COMMD8-202ENST00000509220 SUPT4H1P63272 117 aaKnown RBP11.75□□□□□ -0.53
COMMD8-202ENST00000509220 TMEM128Q5BJH2 165 aa11.75□□□□□ -0.53
COMMD8-202ENST00000509220 TMEM116Q8NCL8 245 aa11.75□□□□□ -0.53
COMMD8-202ENST00000509220 SLC25A21Q9BQT8 299 aaPredicted RBP11.75□□□□□ -0.53
COMMD8-202ENST00000509220 GINS3Q9BRX5 216 aa11.75□□□□□ -0.53
COMMD8-202ENST00000509220 WFDC10AQ9H1F0 79 aa11.75□□□□□ -0.53
COMMD8-202ENST00000509220 HEYLQ9NQ87 328 aaPredicted RBP11.75□□□□□ -0.53
COMMD8-202ENST00000509220 TRAV14DV4A0A0A6YYC5 116 aa11.74□□□□□ -0.53
COMMD8-202ENST00000509220 ZNF207O43670 478 aaKnown RBP11.74□□□□□ -0.53
COMMD8-202ENST00000509220 SCGB2A1O75556 95 aa11.74□□□□□ -0.53
COMMD8-202ENST00000509220 OPRK1P41145 380 aa11.74□□□□□ -0.53
COMMD8-202ENST00000509220 CCR6P51684 374 aa11.74□□□□□ -0.53
COMMD8-202ENST00000509220 C2orf83Q53S99 150 aa11.74□□□□□ -0.53
COMMD8-202ENST00000509220 NMSQ5H8A3 153 aa11.74□□□□□ -0.53
COMMD8-202ENST00000509220 ZNF600Q6ZNG1 722 aa11.74□□□□□ -0.53
COMMD8-202ENST00000509220 LGI3Q8N145 548 aa11.74□□□□□ -0.53
COMMD8-202ENST00000509220 OR4X1Q8NH49 305 aa11.74□□□□□ -0.53
COMMD8-202ENST00000509220 MUC7Q8TAX7 377 aa11.74□□□□□ -0.53
COMMD8-202ENST00000509220 FAM110AQ9BQ89 295 aa11.74□□□□□ -0.53
COMMD8-202ENST00000509220 RHPN1-AS1Q9BWJ2 59 aa11.74□□□□□ -0.53
COMMD8-202ENST00000509220 HIPK2Q9H2X6 1198 aa11.74□□□□□ -0.53
COMMD8-202ENST00000509220 FNDC4Q9H6D8 234 aaPredicted RBP11.74□□□□□ -0.53
COMMD8-202ENST00000509220 DUXBA0A1W2PPF3 345 aa11.73□□□□□ -0.53
COMMD8-202ENST00000509220 RPS10-NUDT3A0A1W2PQS6 291 aa11.73□□□□□ -0.53
COMMD8-202ENST00000509220 CEBPZOSA8MTT3 80 aa11.73□□□□□ -0.53
COMMD8-202ENST00000509220 CHEK1O14757 476 aa11.73□□□□□ -0.53
COMMD8-202ENST00000509220 CLN5O75503 358 aa11.73□□□□□ -0.53
COMMD8-202ENST00000509220 CD5P06127 495 aa11.73□□□□□ -0.53
COMMD8-202ENST00000509220 BMI1P35226 326 aa11.73□□□□□ -0.53
COMMD8-202ENST00000509220 SMCO1Q147U7 214 aa11.73□□□□□ -0.53
COMMD8-202ENST00000509220 TOMM20LQ6UXN7 152 aa11.73□□□□□ -0.53
COMMD8-202ENST00000509220 NOXA1Q86UR1 476 aa11.73□□□□□ -0.53
COMMD8-202ENST00000509220 RNASEH2CQ8TDP1 164 aaKnown RBP11.73□□□□□ -0.53
COMMD8-202ENST00000509220 SRRQ9GZT4 340 aa11.73□□□□□ -0.53
COMMD8-202ENST00000509220 PRR13Q9NZ81 148 aa11.73□□□□□ -0.53
COMMD8-202ENST00000509220 TRAV30A0A087WSZ9 112 aa11.72□□□□□ -0.53
COMMD8-202ENST00000509220 OR4C46A6NHA9 309 aa11.72□□□□□ -0.53
COMMD8-202ENST00000509220 LYZL2Q7Z4W2 148 aa11.72□□□□□ -0.53
COMMD8-202ENST00000509220 TMED4Q7Z7H5 227 aa11.72□□□□□ -0.53
COMMD8-202ENST00000509220 SLC24A4Q8NFF2 622 aa11.72□□□□□ -0.53
COMMD8-202ENST00000509220 RNF2Q99496 336 aa11.72□□□□□ -0.53
COMMD8-202ENST00000509220 EDA2RQ9HAV5 297 aa11.72□□□□□ -0.53
COMMD8-202ENST00000509220 NDUFA13Q9P0J0 144 aa11.72□□□□□ -0.53
COMMD8-202ENST00000509220 HSPB7Q9UBY9 170 aa11.72□□□□□ -0.53
COMMD8-202ENST00000509220 PUS1Q9Y606 427 aaKnown RBP eCLIP11.72□□□□□ -0.53
COMMD8-202ENST00000509220 NBEAL2Q6ZNJ1 2754 aa11.72□□□□□ -0.53
COMMD8-202ENST00000509220 LOC102724200A0A096LPH7 203 aaPredicted RBP11.71□□□□□ -0.53
COMMD8-202ENST00000509220 A0A1B0GU03 582 aa11.71□□□□□ -0.53
COMMD8-202ENST00000509220 SLC25A4P12235 298 aa11.71□□□□□ -0.53
COMMD8-202ENST00000509220 TNFRSF9Q07011 255 aa11.71□□□□□ -0.53
COMMD8-202ENST00000509220 MLANAQ16655 118 aa11.71□□□□□ -0.53
COMMD8-202ENST00000509220 LRTM2Q8N967 370 aa11.71□□□□□ -0.53
COMMD8-202ENST00000509220 GGTLC1Q9BX51 225 aa11.71□□□□□ -0.53
COMMD8-202ENST00000509220 ZFAND3Q9H8U3 227 aa11.71□□□□□ -0.53
COMMD8-202ENST00000509220 U3KQ87 197 aa11.71□□□□□ -0.53
COMMD8-202ENST00000509220 NAP1L6A6NFF2 107 aa11.7□□□□□ -0.54
COMMD8-202ENST00000509220 NPY1RP25929 384 aa11.7□□□□□ -0.54
COMMD8-202ENST00000509220 CMC4P56277 68 aaPredicted RBP11.7□□□□□ -0.54
COMMD8-202ENST00000509220 ATP5IP56385 69 aaPredicted RBP11.7□□□□□ -0.54
COMMD8-202ENST00000509220 RBMS2Q15434 407 aaKnown RBP11.7□□□□□ -0.54
COMMD8-202ENST00000509220 FAM90A2PQ658T7 463 aa11.7□□□□□ -0.54
COMMD8-202ENST00000509220 ETFRF1Q6IPR1 90 aa11.7□□□□□ -0.54
COMMD8-202ENST00000509220 VSIRQ9H7M9 311 aa11.7□□□□□ -0.54
COMMD8-202ENST00000509220 MRPL36Q9P0J6 103 aaKnown RBP11.7□□□□□ -0.54
COMMD8-202ENST00000509220 SLC25A6P12236 298 aa11.69□□□□□ -0.54
COMMD8-202ENST00000509220 LYL1P12980 280 aa11.69□□□□□ -0.54
COMMD8-202ENST00000509220 INPP1P49441 399 aa11.69□□□□□ -0.54
COMMD8-202ENST00000509220 ODF3L2Q3SX64 289 aa11.69□□□□□ -0.54
COMMD8-202ENST00000509220 CASC10Q5T4H9 136 aa11.69□□□□□ -0.54
COMMD8-202ENST00000509220 PRSS54Q6PEW0 395 aa11.69□□□□□ -0.54
COMMD8-202ENST00000509220 CENPSQ8N2Z9 138 aa11.69□□□□□ -0.54
COMMD8-202ENST00000509220 DTD1Q8TEA8 209 aa11.69□□□□□ -0.54
COMMD8-202ENST00000509220 TMEM170AQ8WVE7 144 aa11.69□□□□□ -0.54
COMMD8-202ENST00000509220 TMEM231Q9H6L2 316 aa11.69□□□□□ -0.54
COMMD8-202ENST00000509220 DNAH7Q8WXX0 4024 aa11.69□□□□□ -0.54
COMMD8-202ENST00000509220 KMT2CQ8NEZ4 4911 aaKnown RBP11.68□□□□□ -0.54
COMMD8-202ENST00000509220 IGHV3-49A0A0A0MS15 119 aa11.68□□□□□ -0.54
COMMD8-202ENST00000509220 A0A1W2PS18 150 aa11.68□□□□□ -0.54
COMMD8-202ENST00000509220 PITX3O75364 302 aa11.68□□□□□ -0.54
COMMD8-202ENST00000509220 NXPH3O95157 252 aa11.68□□□□□ -0.54
COMMD8-202ENST00000509220 SFT2D2O95562 160 aa11.68□□□□□ -0.54
COMMD8-202ENST00000509220 IFNA10P01566 189 aa11.68□□□□□ -0.54
COMMD8-202ENST00000509220 IGKV1-17P01599 117 aa11.68□□□□□ -0.54
COMMD8-202ENST00000509220 NPPCP23582 126 aa11.68□□□□□ -0.54
COMMD8-202ENST00000509220 VAMP1P23763 118 aa11.68□□□□□ -0.54
COMMD8-202ENST00000509220 UBE2MP61081 183 aaKnown RBP11.68□□□□□ -0.54
COMMD8-202ENST00000509220 PAFAH1B2P68402 229 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms