RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 FBXL15Q9H469 300 aa7.39□□□□□ -1.23
HTT-205ENST00000509043 TPSG1Q9NRR2 321 aa7.39□□□□□ -1.23
HTT-205ENST00000509043 C1RLQ9NZP8 487 aa7.39□□□□□ -1.23
HTT-205ENST00000509043 PIEZO1Q92508 2521 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 IGKV1D-37A0A075B6S9 117 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 TRAV9-1A0A075B6T8 112 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 OR7C2O60412 319 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 SCGB2A1O75556 95 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 NDUFB4O95168 129 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 CNIH1O95406 144 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 FAM106CPP0CH98 169 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 DEFA4P12838 97 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 HOXB4P17483 251 aaPredicted RBP7.38□□□□□ -1.23
HTT-205ENST00000509043 NPPCP23582 126 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 BRS3P32247 399 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 RPS10P46783 165 aaKnown RBP7.38□□□□□ -1.23
HTT-205ENST00000509043 UBE2G2P60604 165 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 LCN2P80188 198 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 C5orf64Q2M2E5 130 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 ZNF562Q6V9R5 426 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 C16orf82Q7Z2V1 217 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 Q8N6K4 173 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 FAM122AQ96E09 287 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 MISP3Q96FF7 219 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 EAF1Q96JC9 268 aaPredicted RBP7.38□□□□□ -1.23
HTT-205ENST00000509043 ZNF48Q96MX3 618 aaPredicted RBP7.38□□□□□ -1.23
HTT-205ENST00000509043 TNFRSF19Q9NS68 423 aa7.38□□□□□ -1.23
HTT-205ENST00000509043 MALRD1Q5VYJ5 2156 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 TRAV30A0A087WSZ9 112 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 C5orf52A6NGY3 159 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 NPIPB5A8MRT5 1133 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 C19orf84I3L1E1 186 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 UBE2CO00762 179 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 HYPMO75409 117 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 EIF3GO75821 320 aaKnown RBP eCLIP7.37□□□□□ -1.23
HTT-205ENST00000509043 TOX4O94842 621 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 S100A8P05109 93 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 PFN1P07737 140 aaKnown RBP7.37□□□□□ -1.23
HTT-205ENST00000509043 CNTFRP26992 372 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 LMO4P61968 165 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 MLANAQ16655 118 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 SPATA31B1PQ5VZV4 182 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 OR51G1Q8NGK1 321 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 TMEM37Q8WXS4 190 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 FAM167A-AS1Q96KT0 104 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 PIMREGQ9BSJ6 248 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 SAV1Q9H4B6 383 aaPredicted RBP7.37□□□□□ -1.23
HTT-205ENST00000509043 SRD5A3Q9H8P0 318 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 THYN1Q9P016 225 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 RNF24Q9Y225 148 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 YTHDF2Q9Y5A9 579 aaKnown RBP7.37□□□□□ -1.23
HTT-205ENST00000509043 HILPDAQ9Y5L2 63 aa7.37□□□□□ -1.23
HTT-205ENST00000509043 MDFIC2A0A1B0GVS7 189 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 I3L2K1 104 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 AP4M1O00189 453 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 GGCTO75223 188 aaKnown RBP7.36□□□□□ -1.23
HTT-205ENST00000509043 TYMSP04818 313 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 S100A9P06702 114 aaKnown RBP7.36□□□□□ -1.23
HTT-205ENST00000509043 ZFP36P26651 326 aaKnown RBP7.36□□□□□ -1.23
HTT-205ENST00000509043 S100A7P31151 101 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 GALR1P47211 349 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 MFAP2P55001 183 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 FAM3BP58499 235 aaPredicted RBP7.36□□□□□ -1.23
HTT-205ENST00000509043 DSCR9P59020 149 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 TAS2R60P59551 318 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 UBE2L3P68036 154 aaKnown RBP7.36□□□□□ -1.23
HTT-205ENST00000509043 SSBP2P81877 361 aaPredicted RBP7.36□□□□□ -1.23
HTT-205ENST00000509043 RPL19P84098 196 aaKnown RBP7.36□□□□□ -1.23
HTT-205ENST00000509043 FOXL1Q12952 345 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 FXYD3Q14802 87 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 SMUG1Q53HV7 270 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 LDLRAD2Q5SZI1 272 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 OR5AU1Q8NGC0 362 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 SFRP2Q96HF1 295 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 PAXXQ9BUH6 204 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 SLC25A2Q9BXI2 301 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 OR51M1Q9H341 326 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 NCOR2Q9Y618 2525 aa7.36□□□□□ -1.23
HTT-205ENST00000509043 TGIF2-C20orf24A0A0A6YYL0 155 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 SCO2A0A1W2PP80 73 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 HELTA6NFD8 242 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 PPP5D1E7EU14 171 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 REG1AP05451 166 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 CXCL1P09341 107 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 OR10J4P0C629 311 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 HIST1H1BP16401 226 aaKnown RBP7.35□□□□□ -1.23
HTT-205ENST00000509043 GATA2P23769 480 aaPredicted RBP7.35□□□□□ -1.23
HTT-205ENST00000509043 PLA2G5P39877 138 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 DLX1P56177 255 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 KLRD1Q13241 179 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 KIAA0141Q14154 515 aaPredicted RBP7.35□□□□□ -1.23
HTT-205ENST00000509043 HES1Q14469 280 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 KLK9Q2XQG4 91 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 ZNF343Q6P1L6 599 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 LHFPL4Q7Z7J7 247 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 ZFP82Q8N141 532 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 TTC9CQ8N5M4 171 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 ARPC1AQ92747 370 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 SMIM12Q96EX1 92 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 ZNF503Q96F45 646 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms