RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 SUB1P53999 127 aaKnown RBP eCLIP11.03□□□□□ -0.64
UBE2D3-228ENST00000508974 MLANAQ16655 118 aa11.03□□□□□ -0.64
UBE2D3-228ENST00000508974 ODF3L2Q3SX64 289 aa11.03□□□□□ -0.64
UBE2D3-228ENST00000508974 LCE2AQ5TA79 106 aaPredicted RBP11.03□□□□□ -0.64
UBE2D3-228ENST00000508974 GPR146Q96CH1 333 aa11.03□□□□□ -0.64
UBE2D3-228ENST00000508974 RHPN1-AS1Q9BWJ2 59 aa11.03□□□□□ -0.64
UBE2D3-228ENST00000508974 RABL2AQ9UBK7 228 aaPredicted RBP11.03□□□□□ -0.64
UBE2D3-228ENST00000508974 CACNG5Q9UF02 275 aa11.03□□□□□ -0.64
UBE2D3-228ENST00000508974 RABL2BQ9UNT1 228 aa11.03□□□□□ -0.64
UBE2D3-228ENST00000508974 TRAV14DV4A0A0A6YYC5 116 aa11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 IGHV3-66A0A0C4DH42 116 aa11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 OR4C46A6NHA9 309 aa11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 CHEK1O14757 476 aa11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 AKR1C4P17516 323 aa11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 FCGR2BP31994 310 aaPredicted RBP11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 NPBWR1P48145 328 aa11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 DHODHQ02127 395 aa11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 PYDC2Q56P42 97 aa11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 TOMM20LQ6UXN7 152 aa11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 GBGT1Q8N5D6 347 aa11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 TMEM230Q96A57 120 aa11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 OR10C1Q96KK4 312 aa11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 HEYLQ9NQ87 328 aaPredicted RBP11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 MRPL36Q9P0J6 103 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 SCP2D1Q9UJQ7 156 aa11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 PUS1Q9Y606 427 aaKnown RBP eCLIP11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 TENM2Q9NT68 2774 aa11.02□□□□□ -0.65
UBE2D3-228ENST00000508974 STARD9Q9P2P6 4700 aa11.01□□□□□ -0.65
UBE2D3-228ENST00000508974 CEBPZOSA8MTT3 80 aa11.01□□□□□ -0.65
UBE2D3-228ENST00000508974 INS-IGF2F8WCM5 200 aa11.01□□□□□ -0.65
UBE2D3-228ENST00000508974 APOHP02749 345 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-228ENST00000508974 RPL35AP18077 110 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-228ENST00000508974 SPCS3P61009 180 aa11.01□□□□□ -0.65
UBE2D3-228ENST00000508974 ZNF124Q15973 351 aa11.01□□□□□ -0.65
UBE2D3-228ENST00000508974 APRG1Q8IVJ8 170 aa11.01□□□□□ -0.65
UBE2D3-228ENST00000508974 FAM219AQ8IW50 185 aa11.01□□□□□ -0.65
UBE2D3-228ENST00000508974 SOSTQ9BQB4 213 aa11.01□□□□□ -0.65
UBE2D3-228ENST00000508974 FNDC4Q9H6D8 234 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-228ENST00000508974 DYNC2H1Q8NCM8 4307 aaKnown RBP11□□□□□ -0.65
UBE2D3-228ENST00000508974 A0A1B0GU03 582 aa11□□□□□ -0.65
UBE2D3-228ENST00000508974 CORTO00230 105 aa11□□□□□ -0.65
UBE2D3-228ENST00000508974 TMEM50AO95807 157 aa11□□□□□ -0.65
UBE2D3-228ENST00000508974 TMEM187Q14656 261 aa11□□□□□ -0.65
UBE2D3-228ENST00000508974 ZNF600Q6ZNG1 722 aa11□□□□□ -0.65
UBE2D3-228ENST00000508974 WFDC3Q8IUB2 231 aa11□□□□□ -0.65
UBE2D3-228ENST00000508974 ST8SIA2Q92186 375 aa11□□□□□ -0.65
UBE2D3-228ENST00000508974 GINS3Q9BRX5 216 aa11□□□□□ -0.65
UBE2D3-228ENST00000508974 DEFB135Q30KP9 77 aa10.99□□□□□ -0.65
UBE2D3-228ENST00000508974 LCE2CQ5TA81 110 aa10.99□□□□□ -0.65
UBE2D3-228ENST00000508974 PVRIGQ6DKI7 326 aa10.99□□□□□ -0.65
UBE2D3-228ENST00000508974 TCF24Q7RTU0 167 aa10.99□□□□□ -0.65
UBE2D3-228ENST00000508974 TMED4Q7Z7H5 227 aa10.99□□□□□ -0.65
UBE2D3-228ENST00000508974 OVOL2Q9BRP0 275 aa10.99□□□□□ -0.65
UBE2D3-228ENST00000508974 KCNIP3Q9Y2W7 256 aa10.99□□□□□ -0.65
UBE2D3-228ENST00000508974 TMEM56-RWDD3S4R434 201 aa10.99□□□□□ -0.65
UBE2D3-228ENST00000508974 V9GYH0 126 aa10.99□□□□□ -0.65
UBE2D3-228ENST00000508974 CLN5O75503 358 aa10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 SULT1A3P0DMM9 295 aa10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 SULT1A4P0DMN0 295 aa10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 S100A5P33763 92 aa10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 HTR2BP41595 481 aa10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 RPL11P62913 178 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 SUPT4H1P63272 117 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 KLF9Q13886 244 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 BSXQ3C1V8 233 aa10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 TIGITQ495A1 244 aa10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 LYZL2Q7Z4W2 148 aa10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 LILRB2Q8N423 598 aa10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 TOMM5Q8N4H5 51 aa10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 SLC24A4Q8NFF2 622 aa10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 OR52E5Q8NH55 327 aa10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 TRIM63Q969Q1 353 aa10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 SCGB3A2Q96PL1 93 aa10.98□□□□□ -0.65
UBE2D3-228ENST00000508974 DFFBO76075 338 aa10.97□□□□□ -0.65
UBE2D3-228ENST00000508974 FAUP35544 74 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-228ENST00000508974 APOC4P55056 127 aa10.97□□□□□ -0.65
UBE2D3-228ENST00000508974 ZNF79Q15937 498 aa10.97□□□□□ -0.65
UBE2D3-228ENST00000508974 AARDQ4LEZ3 155 aa10.97□□□□□ -0.65
UBE2D3-228ENST00000508974 LINC00528Q8N1L1 170 aa10.97□□□□□ -0.65
UBE2D3-228ENST00000508974 OR4X1Q8NH49 305 aa10.97□□□□□ -0.65
UBE2D3-228ENST00000508974 GALNT14Q96FL9 552 aa10.97□□□□□ -0.65
UBE2D3-228ENST00000508974 RND2P52198 227 aa10.96□□□□□ -0.65
UBE2D3-228ENST00000508974 C2orf83Q53S99 150 aa10.96□□□□□ -0.65
UBE2D3-228ENST00000508974 FAM90A2PQ658T7 463 aa10.96□□□□□ -0.65
UBE2D3-228ENST00000508974 TMEM170AQ8WVE7 144 aa10.96□□□□□ -0.65
UBE2D3-228ENST00000508974 IL22RA2Q969J5 263 aa10.96□□□□□ -0.65
UBE2D3-228ENST00000508974 RBM38Q9H0Z9 239 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-228ENST00000508974 MAP6D1Q9H9H5 199 aa10.96□□□□□ -0.65
UBE2D3-228ENST00000508974 RPS10-NUDT3A0A1W2PQS6 291 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 DNASE2O00115 360 aaPredicted RBP10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 SPRY2O43597 315 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 SCGB2A1O75556 95 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 IFNA10P01566 189 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 ANXA3P12429 323 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 NPPCP23582 126 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 NPY1RP25929 384 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 BMI1P35226 326 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 AP3S2P59780 193 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 PAFAH1B2P68402 229 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms