RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 RANGRFQ9HD47 186 aaPredicted RBP6.58□□□□□ -1.36
SNCA-211ENST00000508895 C21orf62Q9NYP8 219 aa6.58□□□□□ -1.36
SNCA-211ENST00000508895 THYN1Q9P016 225 aa6.58□□□□□ -1.36
SNCA-211ENST00000508895 MRPL36Q9P0J6 103 aaKnown RBP6.58□□□□□ -1.36
SNCA-211ENST00000508895 CACFD1Q9UGQ2 172 aa6.58□□□□□ -1.36
SNCA-211ENST00000508895 ALG5Q9Y673 324 aa6.58□□□□□ -1.36
SNCA-211ENST00000508895 OR2T8A6NH00 312 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 FAM25EA8MYX2 175 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 H3BP45 60 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 CORTO00230 105 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 SSSCA1O60232 199 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 MED6O75586 246 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 TMEM50AO95807 157 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 SCGB1D2O95969 90 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 MBPP02686 304 aaPredicted RBP6.57□□□□□ -1.36
SNCA-211ENST00000508895 ZP3P21754 424 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 ADMP35318 185 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 ARL3P36405 182 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 NKX2-1P43699 371 aaPredicted RBP6.57□□□□□ -1.36
SNCA-211ENST00000508895 POLR2GP62487 172 aaKnown RBP eCLIP6.57□□□□□ -1.36
SNCA-211ENST00000508895 OXA1LQ15070 435 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 RGS21Q2M5E4 152 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 OR4C12Q96R67 309 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 ZC4H2Q9NQZ6 224 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 ZNF256Q9Y2P7 627 aaPredicted RBP6.57□□□□□ -1.36
SNCA-211ENST00000508895 STAB2Q8WWQ8 2551 aa6.57□□□□□ -1.36
SNCA-211ENST00000508895 C5orf51A6NDU8 294 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 PRSS46E5RG02 174 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 K7EPK0 472 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 WRBO00258 174 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 GOSR2O14653 212 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 TGOLN2O43493 480 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 SIX6O95475 246 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 LY86O95711 162 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 IFNA10P01566 189 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 IGLV1-51P01701 117 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 GP9P14770 177 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 FCGR2BP31994 310 aaPredicted RBP6.56□□□□□ -1.36
SNCA-211ENST00000508895 OPRK1P41145 380 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 SUB1P53999 127 aaKnown RBP eCLIP6.56□□□□□ -1.36
SNCA-211ENST00000508895 H2BFSP57053 126 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 IL15RAQ13261 267 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 RPEL1Q2QD12 228 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 FAM209BQ5JX69 171 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 GSG1LQ6UXU4 331 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 SBSPONQ8IVN8 264 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 UBAC2Q8NBM4 344 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 BSCL2Q96G97 398 aaPredicted RBP6.56□□□□□ -1.36
SNCA-211ENST00000508895 C2orf50Q96LR7 162 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 ATP6V0BQ99437 205 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 CHRDL1Q9BU40 450 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 GPR61Q9BZJ8 451 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 HIPK2Q9H2X6 1198 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 C11orf1Q9H5F2 150 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 GSKIPQ9P0R6 139 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 U3KQ87 197 aa6.56□□□□□ -1.36
SNCA-211ENST00000508895 IGHV3-35A0A0C4DH35 117 aa6.55□□□□□ -1.36
SNCA-211ENST00000508895 A8MWP6 167 aa6.55□□□□□ -1.36
SNCA-211ENST00000508895 GGCTO75223 188 aaKnown RBP6.55□□□□□ -1.36
SNCA-211ENST00000508895 CCNKO75909 580 aa6.55□□□□□ -1.36
SNCA-211ENST00000508895 OR2C1O95371 312 aa6.55□□□□□ -1.36
SNCA-211ENST00000508895 CLEC3BP05452 202 aa6.55□□□□□ -1.36
SNCA-211ENST00000508895 CTSGP08311 255 aa6.55□□□□□ -1.36
SNCA-211ENST00000508895 PAX9P55771 341 aa6.55□□□□□ -1.36
SNCA-211ENST00000508895 CD69Q07108 199 aa6.55□□□□□ -1.36
SNCA-211ENST00000508895 MLANAQ16655 118 aa6.55□□□□□ -1.36
SNCA-211ENST00000508895 Q56UQ5 140 aa6.55□□□□□ -1.36
SNCA-211ENST00000508895 UNQ9165/PRO28630Q6UXU0 137 aa6.55□□□□□ -1.36
SNCA-211ENST00000508895 SLC16A13Q7RTY0 426 aa6.55□□□□□ -1.36
SNCA-211ENST00000508895 OR9G4Q8NGQ1 327 aa6.55□□□□□ -1.36
SNCA-211ENST00000508895 RNASEH2CQ8TDP1 164 aaKnown RBP6.55□□□□□ -1.36
SNCA-211ENST00000508895 CACNG8Q8WXS5 425 aa6.55□□□□□ -1.36
SNCA-211ENST00000508895 TMEM190Q8WZ59 177 aa6.55□□□□□ -1.36
SNCA-211ENST00000508895 WDR89Q96FK6 387 aaPredicted RBP6.55□□□□□ -1.36
SNCA-211ENST00000508895 CIB3Q96Q77 187 aaPredicted RBP6.55□□□□□ -1.36
SNCA-211ENST00000508895 ZNF436Q9C0F3 470 aaPredicted RBP6.55□□□□□ -1.36
SNCA-211ENST00000508895 DYNC2H1Q8NCM8 4307 aaKnown RBP6.55□□□□□ -1.36
SNCA-211ENST00000508895 AGRNO00468 2067 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 TMEM213A2RRL7 107 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 ZNF785A8K8V0 405 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 PMS2P5A8MQ11 134 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 SSNA1O43805 119 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 INSL3P51460 131 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 RND2P52198 227 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 MFAP4P55083 255 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 S100A10P60903 97 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 RAB32Q13637 225 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 SPANXN5Q5MJ07 72 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 PRSS54Q6PEW0 395 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 SPSB3Q6PJ21 355 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 TMEM14EPQ6UXP3 125 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 OR4X1Q8NH49 305 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 SMIM8Q96KF7 97 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 RAB40CQ96S21 281 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 TXN2Q99757 166 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 NMES1Q9C002 83 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 WFDC10AQ9H1F0 79 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 MGAT4CQ9UBM8 478 aa6.54□□□□□ -1.36
SNCA-211ENST00000508895 LSM5Q9Y4Y9 91 aaKnown RBP6.54□□□□□ -1.36
SNCA-211ENST00000508895 IGHV3OR16-8A0A075B7F1 116 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms