RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 MEF2CQ06413 473 aaPredicted RBP3.17□□□□□ -1.9
NEDD4-209ENST00000508871 DHRS2Q13268 280 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 KIAA0087Q14695 138 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 MSMO1Q15800 293 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 HRCT1Q6UXD1 115 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF843Q8N446 348 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 SLC22A24Q8N4F4 322 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 PSG8Q9UQ74 426 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 IGLV7-46A0A075B6I9 117 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 OPN1SWP03999 348 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 GPX1P07203 203 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF708P17019 499 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 CXCL5P42830 114 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 CRYBA2P53672 197 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 SYNJ2BPP57105 145 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 NHLRC3Q5JS37 347 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF550Q7Z398 422 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 PPP1R27Q86WC6 154 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 SPTSSAQ969W0 71 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 OR5AC2Q9NZP5 309 aa3.17□□□□□ -1.9
NEDD4-209ENST00000508871 TRPM6Q9BX84 2022 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 SRP19P09132 144 aaKnown RBP3.16□□□□□ -1.9
NEDD4-209ENST00000508871 ATP5G3P48201 142 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 FUT5Q11128 374 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 Q499Y3 187 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 GUSBP11Q6P575 273 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 TEX43Q6ZNM6 134 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 SIGLEC9Q9Y336 463 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 A0A0J9YW62 118 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 INS-IGF2F8WCM5 200 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 RER1O15258 196 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 CLPSP04118 112 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 IL2RGP31785 369 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 GAPTQ8N292 157 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 PRR26Q8N8Z3 221 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 C8orf49Q96NF6 230 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 IGLV3-12A0A075B6K2 115 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 IGKV3D-11A0A0A0MRZ8 115 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 TRGV10A0A0A0MS01 117 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 A0A0J9YXY3 114 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 CORTO00230 105 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 HIST1H1DP16402 221 aaKnown RBP3.16□□□□□ -1.9
NEDD4-209ENST00000508871 PTGDSP41222 190 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 UBE2BP63146 152 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 C10orf111Q8N326 155 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 CCL4L1Q8NHW4 92 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 TMED7-TICAM2A0A0A6YYA0 188 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 GTSCR1Q86UQ5 136 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 STARD4Q96DR4 205 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 CST9LQ9H4G1 147 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 RPS6KB2Q9UBS0 482 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 THADAQ6YHU6 1953 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 A0A1B0GX78 115 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 COX7A2LO14548 114 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 TAX1BP3O14907 124 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 KLF7O75840 302 aaPredicted RBP3.16□□□□□ -1.9
NEDD4-209ENST00000508871 HERVK_113P61574 105 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 AADACL3Q5VUY0 350 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 PIFOQ8TCI5 191 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF226Q9NYT6 803 aa3.16□□□□□ -1.9
NEDD4-209ENST00000508871 MMP23AO75900 390 aa3.15□□□□□ -1.9
NEDD4-209ENST00000508871 LINC00869P0C866 280 aa3.15□□□□□ -1.9
NEDD4-209ENST00000508871 WNT4P56705 351 aa3.15□□□□□ -1.9
NEDD4-209ENST00000508871 ERVK11-1P61568 191 aa3.15□□□□□ -1.9
NEDD4-209ENST00000508871 C2orf66Q6UXQ4 117 aa3.15□□□□□ -1.9
NEDD4-209ENST00000508871 CBLN4Q9NTU7 201 aa3.15□□□□□ -1.9
NEDD4-209ENST00000508871 IGHV4-39P01824 125 aa3.15□□□□□ -1.9
NEDD4-209ENST00000508871 HMGN2P05204 90 aaKnown RBP3.15□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF85Q03923 595 aa3.15□□□□□ -1.9
NEDD4-209ENST00000508871 LINC00114Q6XXX2 140 aa3.15□□□□□ -1.9
NEDD4-209ENST00000508871 SAP25Q8TEE9 199 aa3.15□□□□□ -1.9
NEDD4-209ENST00000508871 SCGB3A1Q96QR1 104 aa3.15□□□□□ -1.9
NEDD4-209ENST00000508871 TMEM204Q9BSN7 226 aa3.15□□□□□ -1.9
NEDD4-209ENST00000508871 TMEM38BQ9NVV0 291 aa3.15□□□□□ -1.9
NEDD4-209ENST00000508871 CPAMD8Q8IZJ3 1885 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 TRAV30A0A087WSZ9 112 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 TRAV26-2A0A0B4J265 109 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 LYPD3O95274 346 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 IL5P05113 134 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 BTCP35070 178 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 DAZ2Q13117 558 aaKnown RBP3.15□□□□□ -1.91
NEDD4-209ENST00000508871 STPG1Q5TH74 334 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 FBXW12Q6X9E4 464 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 Q6ZS49 121 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 DAZ4Q86SG3 579 aaKnown RBP3.15□□□□□ -1.91
NEDD4-209ENST00000508871 ATG4DQ86TL0 474 aaPredicted RBP3.15□□□□□ -1.91
NEDD4-209ENST00000508871 MAL2Q969L2 176 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 OR10C1Q96KK4 312 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 SDF2Q99470 211 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 PARP12Q9H0J9 701 aaKnown RBP3.15□□□□□ -1.91
NEDD4-209ENST00000508871 DAZ1Q9NQZ3 744 aaKnown RBP3.15□□□□□ -1.91
NEDD4-209ENST00000508871 DAZ3Q9NR90 486 aaKnown RBP3.15□□□□□ -1.91
NEDD4-209ENST00000508871 JPT1Q9UK76 154 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 TRAV17A0A0B4J275 112 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 IGHMP01871 453 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 TRAPPC2P0DI81 140 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 TRAPPC2BP0DI82 140 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 SELENOPP49908 381 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 HSD52Q0P140 79 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF718Q3SXZ3 478 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms