RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 RBKSQ9H477 322 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 DMRT1Q9Y5R6 373 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 TRAV30A0A087WSZ9 112 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 OR2T8A6NH00 312 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 FAM25EA8MYX2 175 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 PPP5D1E7EU14 171 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 G3V4G9 280 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 NXPH3O95157 252 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 TRBV12-3P01733 135 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 IGHV3-23P01764 117 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 IFNA4P05014 189 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 BMI1P35226 326 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 MFAP2P55001 183 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 OXLD1Q5BKU9 147 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 GSG1LQ6UXU4 331 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 MARC2Q969Z3 335 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 RAB40CQ96S21 281 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 SIGLEC8Q9NYZ4 499 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 GSKIPQ9P0R6 139 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 UFC1Q9Y3C8 167 aa7.01□□□□□ -1.29
NUP54-207ENST00000508583 ZNF320A2RRD8 509 aa7□□□□□ -1.29
NUP54-207ENST00000508583 A8MWP6 167 aa7□□□□□ -1.29
NUP54-207ENST00000508583 NDUFA4O00483 81 aa7□□□□□ -1.29
NUP54-207ENST00000508583 OR2C1O95371 312 aa7□□□□□ -1.29
NUP54-207ENST00000508583 SCGB1D2O95969 90 aa7□□□□□ -1.29
NUP54-207ENST00000508583 FABP1P07148 127 aa7□□□□□ -1.29
NUP54-207ENST00000508583 PVALBP20472 110 aaPredicted RBP7□□□□□ -1.29
NUP54-207ENST00000508583 ELLP55199 621 aaPredicted RBP7□□□□□ -1.29
NUP54-207ENST00000508583 CYCSP99999 105 aaKnown RBP7□□□□□ -1.29
NUP54-207ENST00000508583 ID3Q02535 119 aa7□□□□□ -1.29
NUP54-207ENST00000508583 EGFEM1PQ0D2K5 195 aa7□□□□□ -1.29
NUP54-207ENST00000508583 RGS21Q2M5E4 152 aa7□□□□□ -1.29
NUP54-207ENST00000508583 BEAN1Q3B7T3 259 aa7□□□□□ -1.29
NUP54-207ENST00000508583 ZBTB8BQ8NAP8 495 aaPredicted RBP7□□□□□ -1.29
NUP54-207ENST00000508583 OR4D5Q8NGN0 318 aa7□□□□□ -1.29
NUP54-207ENST00000508583 OR4X1Q8NH49 305 aa7□□□□□ -1.29
NUP54-207ENST00000508583 CACNG8Q8WXS5 425 aa7□□□□□ -1.29
NUP54-207ENST00000508583 GINS3Q9BRX5 216 aa7□□□□□ -1.29
NUP54-207ENST00000508583 ZNF436Q9C0F3 470 aaPredicted RBP7□□□□□ -1.29
NUP54-207ENST00000508583 STRAPQ9Y3F4 350 aaKnown RBP7□□□□□ -1.29
NUP54-207ENST00000508583 S4R3C0 116 aa7□□□□□ -1.29
NUP54-207ENST00000508583 CMYA5Q8N3K9 4069 aa7□□□□□ -1.29
NUP54-207ENST00000508583 IGHV3-21A0A0B4J1V1 117 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 C15orf62A8K5M9 175 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 L7N2F9 121 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 SSNA1O43805 119 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 SSSCA1O60232 199 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 TSC22D2O75157 780 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 CLN5O75503 358 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 GPX4P36969 197 aaPredicted RBP6.99□□□□□ -1.29
NUP54-207ENST00000508583 TAS2R30P59541 319 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 VAMP2P63027 116 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 LCN12Q6JVE5 192 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 SLC16A13Q7RTY0 426 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 TMEM116Q8NCL8 245 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 OR1S2Q8NGQ3 325 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 OR2K2Q8NGT1 345 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 DYNLRB2Q8TF09 96 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 SLC35E1Q96K37 410 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 C2orf50Q96LR7 162 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 MAGT1Q9H0U3 335 aa6.99□□□□□ -1.29
NUP54-207ENST00000508583 DAZ1Q9NQZ3 744 aaKnown RBP6.99□□□□□ -1.29
NUP54-207ENST00000508583 TECRQ9NZ01 308 aaKnown RBP6.99□□□□□ -1.29
NUP54-207ENST00000508583 PAIP2BQ9ULR5 123 aaKnown RBP6.99□□□□□ -1.29
NUP54-207ENST00000508583 MPTX1A8MV57 137 aa6.98□□□□□ -1.29
NUP54-207ENST00000508583 K7EMT4 169 aa6.98□□□□□ -1.29
NUP54-207ENST00000508583 YIF1AO95070 293 aa6.98□□□□□ -1.29
NUP54-207ENST00000508583 CTSGP08311 255 aa6.98□□□□□ -1.29
NUP54-207ENST00000508583 PET100P0DJ07 73 aa6.98□□□□□ -1.29
NUP54-207ENST00000508583 IAPPP10997 89 aa6.98□□□□□ -1.29
NUP54-207ENST00000508583 CD69Q07108 199 aa6.98□□□□□ -1.29
NUP54-207ENST00000508583 SPANXN5Q5MJ07 72 aa6.98□□□□□ -1.29
NUP54-207ENST00000508583 ZNF600Q6ZNG1 722 aa6.98□□□□□ -1.29
NUP54-207ENST00000508583 TMEM190Q8WZ59 177 aa6.98□□□□□ -1.29
NUP54-207ENST00000508583 NARS2Q96I59 477 aaKnown RBP6.98□□□□□ -1.29
NUP54-207ENST00000508583 SMIM8Q96KF7 97 aa6.98□□□□□ -1.29
NUP54-207ENST00000508583 OR10C1Q96KK4 312 aa6.98□□□□□ -1.29
NUP54-207ENST00000508583 ZC4H2Q9NQZ6 224 aa6.98□□□□□ -1.29
NUP54-207ENST00000508583 PSENENQ9NZ42 101 aa6.98□□□□□ -1.29
NUP54-207ENST00000508583 PFDN2Q9UHV9 154 aa6.98□□□□□ -1.29
NUP54-207ENST00000508583 NOTCH1P46531 2555 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 C2orf70A6NJV1 201 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 F8W735 103 aaPredicted RBP6.97□□□□□ -1.29
NUP54-207ENST00000508583 CCSO14618 274 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 GOSR2O14653 212 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 TMEM50AO95807 157 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 RLN2P04090 185 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 CD5P06127 495 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 CSN3P07498 182 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 FOLR2P14207 255 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 S100A7P31151 101 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 RND2P52198 227 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 POLR2GP62487 172 aaKnown RBP eCLIP6.97□□□□□ -1.29
NUP54-207ENST00000508583 DEFA6Q01524 100 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 PRSS54Q6PEW0 395 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 ACY3Q96HD9 319 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 CHRDL1Q9BU40 450 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 C20orf24Q9BUV8 137 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 NMES1Q9C002 83 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 FNDC4Q9H6D8 234 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms