RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 C2orf70A6NJV1 201 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 TMEM210A6NLX4 147 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 H3BQF6 201 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 RFXANKO14593 260 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 TGOLN2O43493 480 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 MPZL2O60487 215 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 NOS1APO75052 506 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 KRT75O95678 551 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 CST4P01036 141 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 OXTP01178 125 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 HLA-AP01891 365 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 CGB3P0DN86 165 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 CGB7P0DN87 165 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 NFYBP25208 207 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 ANP32AP39687 249 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 SERPINB9P50453 376 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 TPPP2P59282 170 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 CDK6Q00534 326 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 GRK1Q15835 563 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 C12orf74Q32Q52 190 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 KRTAP13-4Q3LI77 160 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 REEP3Q6NUK4 255 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 TBPL2Q6SJ96 375 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 DRAM2Q6UX65 266 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 Q6ZRN7 208 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 TRAPPC6BQ86SZ2 158 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 ANGPTL5Q86XS5 388 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 OR9I1Q8NGQ6 314 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 ZNRF2Q8NHG8 242 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 TMEM239Q8WW34 195 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 TAMM41Q96BW9 452 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 ANKRD60Q9BZ19 345 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 C20orf27Q9GZN8 174 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 NMNAT1Q9HAN9 279 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 NEK6Q9HC98 313 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 SLC7A11Q9UPY5 501 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 NUBP2Q9Y5Y2 271 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 IGKV1-27A0A075B6S5 117 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 DEFB131BA0A096LNP1 70 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 J3QRE1 110 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 J3QT63 122 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 TOR1AO14656 332 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 XRCC2O43543 280 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 OR2A4O95047 310 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 HLA-DRB1P01911 266 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 TRGV3P03979 118 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 CD14P08571 375 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 IFI30P13284 250 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 PYCR1P32322 319 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 RBM34P42696 430 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 RAB7AP51149 207 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 ZNF121P58317 390 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 GNG3P63215 75 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 PRR3P79522 188 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 AESQ08117 197 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 LTC4SQ16873 150 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 TEX30Q5JUR7 227 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 DCXRQ7Z4W1 244 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 UBE2DNLQ8IWF7 75 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 CNPY4Q8N129 248 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 TRIML2Q8N7C3 387 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 OR2K2Q8NGT1 345 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 OR2T10Q8NGZ9 312 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 DEFB104AQ8WTQ1 72 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 GTF2H4Q92759 462 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 SPTSSAQ969W0 71 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 SLAMF6Q96DU3 332 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 NMNAT3Q96T66 252 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 NAPGQ99747 312 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 COPS4Q9BT78 406 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 RASL12Q9NYN1 266 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 MTCH1Q9NZJ7 389 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 DNAJC27Q9NZQ0 273 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 BLOC1S6Q9UL45 172 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 MPC1Q9Y5U8 109 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 IER3IP1Q9Y5U9 82 aa1.89□□□□□ -2.11
TOPBP1-206ENST00000508524 DHRS12A0PJE2 317 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 PQLC2LA1A4F0 135 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 ODAMA1E959 279 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 TMEM213A2RRL7 107 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 PRORSD1PA6NEY8 169 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 A6NIN4 97 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 C5orf58C9J3I9 102 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 M0QX08 132 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 SIRPB1O00241 398 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 FFAR1O14842 300 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 HAND1O96004 215 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 CRYGBP07316 175 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 HAAOP46952 286 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 SLC18A1P54219 525 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 MMDQ15546 238 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 C5orf64Q2M2E5 130 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 CEACAM21Q3KPI0 293 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 APRG1Q8IVJ8 170 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 YIPF7Q8N8F6 280 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 LFNGQ8NES3 379 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 OR8B12Q8NGG6 310 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 OR51L1Q8NGJ5 315 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 OR52M1Q8NGK5 317 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 OR5B3Q8NH48 314 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms