RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 OR2W1Q9Y3N9 320 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 ANKHD1Q8IWZ3 2542 aaKnown RBP2.45□□□□□ -2.02
NEDD4-208ENST00000508342 TEX22C9J3V5 150 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 CD3DP04234 171 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 CD5P06127 495 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 CD37P11049 281 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 APOC4P55056 127 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 IL13RA2Q14627 380 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 DEFB112Q30KQ8 113 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 C2orf83Q53S99 150 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 DRAM1Q8N682 238 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 FBLIM1Q8WUP2 373 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 SRSF8Q9BRL6 282 aaKnown RBP2.45□□□□□ -2.02
NEDD4-208ENST00000508342 NPVFQ9HCQ7 196 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 ZNF256Q9Y2P7 627 aaPredicted RBP2.45□□□□□ -2.02
NEDD4-208ENST00000508342 MARCH11A6NNE9 402 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 SMLR1H3BR10 107 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 NUDT3O95989 172 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 SSTR5P35346 364 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 MFAP2P55001 183 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 CTF1Q16619 201 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM252Q8N6L7 170 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 OR5C1Q8NGR4 320 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 SPRY4Q9C004 299 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 TRAV8-6A0A0B4J262 113 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 IGHV4-61A0A0C4DH41 118 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 GCM2O75603 506 aaPredicted RBP2.45□□□□□ -2.02
NEDD4-208ENST00000508342 UPK1BO75841 260 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 OR2H2O95918 312 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 MOSP00540 346 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 IL4P05112 153 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 LINC00869P0C866 280 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 SSBP1Q04837 148 aaKnown RBP2.45□□□□□ -2.02
NEDD4-208ENST00000508342 TEX261Q6UWH6 196 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 ZNF66Q6ZN08 573 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 OR5P3Q8WZ94 311 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 RMI2Q96E14 147 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 ASCL2Q99929 193 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 AICDAQ9GZX7 198 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 SLC25A37Q9NYZ2 338 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 HSPB7Q9UBY9 170 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 PLXNB1O43157 2135 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 NDUFS6O75380 124 aaKnown RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 CD8AP01732 235 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 ANOS1P23352 680 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 CNTFRP26992 372 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 CKS2P33552 79 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 SAA4P35542 130 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 RND2P52198 227 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 SNRPNP63162 240 aaKnown RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 IRF3Q14653 427 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 TCTEX1D4Q5JR98 221 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 ZNRF2Q8NHG8 242 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 FBXL15Q9H469 300 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 RBFOX1Q9NWB1 397 aaKnown RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 C21orf62Q9NYP8 219 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 IGHV3-66A0A0C4DH42 116 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 EIF3GO75821 320 aaKnown RBP eCLIP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 SIX6O95475 246 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 CTSDP07339 412 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 ZNF585BQ52M93 769 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 TTC32Q5I0X7 151 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM42Q69YG0 159 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 LYPD2Q6UXB3 125 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 TCF23Q7RTU1 214 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 NDUFA11Q86Y39 141 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 LAX1Q8IWV1 398 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 ZNRF1Q8ND25 227 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 ST6GALNAC6Q969X2 333 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 PRSS27Q9BQR3 290 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 A8MWL6 223 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 F5H768 121 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 RPL36A-HNRNPH2H7BZ11 118 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 RBFOX2O43251 390 aaKnown RBP eCLIP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 PPYP01298 95 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 IGHV2-70P01814 119 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 REG1AP05451 166 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 SNRPCP09234 159 aaKnown RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 GPX4P36969 197 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 FCN2Q15485 313 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 UQCC3Q6UW78 93 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM183AQ8IXX5 376 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 SELENOHQ8IZQ5 122 aaKnown RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 OR4C16Q8NGL9 310 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 OR4D5Q8NGN0 318 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 LSM10Q969L4 123 aaKnown RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 MARC2Q969Z3 335 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 RAB37Q96AX2 223 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 OPN4Q9UHM6 478 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 VPREB3Q9UKI3 123 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 FOXA2Q9Y261 457 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 TEX48A0A1B0GUV7 120 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 TCRBV3S1A0A5B6 114 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 C7orf66A4D0T2 115 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 NPIPB4C9JG80 1138 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 J3QL48 77 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 M0R2Z0 102 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 FCN1O00602 326 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 NDUFS7O75251 213 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 LYL1P12980 280 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms