RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 CORTO00230 105 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 SRSF6Q13247 344 aaKnown RBP10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 Q56UQ5 140 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 UNQ5815/PRO19632Q6UWF5 114 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 BHLHA15Q7RTS1 189 aaPredicted RBP10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 SPATA12Q7Z6I5 190 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 KIR3DL3Q8N743 410 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 NUDT10Q8NFP7 164 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 NUDT11Q96G61 164 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 MRPL27Q9P0M9 148 aaKnown RBP10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 AMMECR1Q9Y4X0 333 aaPredicted RBP10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 TMEM265A0A087WTH1 108 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 FAM181BA6NEQ2 426 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 E7EUB6 86 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 CCL25O15444 150 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 HSBP1O75506 76 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 FAM216BQ8N7L0 139 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 TP73-AS1Q9UF72 201 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 SLC25A15Q9Y619 301 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 VWC2LB2RUY7 222 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 M0R1B8 84 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 CAMPP49913 170 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 GNG5P63218 68 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 RTL8BQ17RB0 113 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 HES3Q5TGS1 186 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 RNASEKQ6P5S7 137 aaKnown RBP10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 ZNF841Q6ZN19 808 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 ZNF329Q86UD4 541 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 KLHDC1Q8N7A1 406 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 OR1L8Q8NGR8 309 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 WIPF2Q8TF74 440 aaPredicted RBP10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 SGK494Q96LW2 274 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 CCL13Q99616 98 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 C19orf24Q9BVV8 132 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 PLSCR4Q9NRQ2 329 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 TNFRSF19Q9NS68 423 aa10.89□□□□□ -0.67
SNCAIP-209ENST00000508017 PRR33A8MZF0 331 aa10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 M0R2Z0 102 aa10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 CCL11P51671 97 aa10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 TBR1Q16650 682 aa10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 MRPL32Q9BYC8 188 aaKnown RBP10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 PRO3102Q9H379 93 aa10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 C19orf67A6NJJ6 358 aa10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 PEX7O00628 323 aa10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 PLAUP00749 431 aa10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 PATE2Q6UY27 113 aa10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 LHFPL4Q7Z7J7 247 aa10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 FDCSPQ8NFU4 85 aa10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 GRAMD2BQ96HH9 432 aa10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 GAFA1Q96PS6 74 aa10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 ALKBH7Q9BT30 221 aaPredicted RBP10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 CLEC5AQ9NY25 188 aa10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 DCHS1Q96JQ0 3298 aa10.88□□□□□ -0.67
SNCAIP-209ENST00000508017 PLXNB1O43157 2135 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 C20orf202A1L168 122 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 SH2D7A6NKC9 451 aaPredicted RBP10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 HIGD1CA8MV81 97 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 NKX2-8O15522 239 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 IGLL1P15814 213 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 KLF3P57682 345 aaPredicted RBP10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 OR8B3Q8NGG8 313 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 OR8B2Q96RD0 313 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 PAXXQ9BUH6 204 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 PROCRQ9UNN8 238 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 COX7A2P2O60397 106 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 WT1P19544 449 aaPredicted RBP10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 CD24P25063 80 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 PCP4P48539 62 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 PMCHL1Q16048 86 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 C10orf55Q5SWW7 151 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 SLC25A48Q6ZT89 311 aaKnown RBP10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 FAM231DQ6ZW35 169 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 OR5B3Q8NH48 314 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 URB1-AS1Q96HZ7 61 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 ZNF714Q96N38 554 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 MRPL20Q9BYC9 149 aaKnown RBP10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 FNDC4Q9H6D8 234 aaPredicted RBP10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 BET1LQ9NYM9 111 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 DKK4Q9UBT3 224 aa10.87□□□□□ -0.67
SNCAIP-209ENST00000508017 TRAV9-2A0A087WT02 112 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 IGHV2-26A0A0B4J1V2 119 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 C2orf70A6NJV1 201 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 M0QZ24 198 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 DLL1O00548 723 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 REG1BP48304 166 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 PTTG1IPP53801 180 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 KLF5Q13887 457 aaPredicted RBP10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 FAM222BQ8WU58 562 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 ORAOV1Q8WV07 137 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 RAB9BQ9NP90 201 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 NDUFA4L2Q9NRX3 87 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 MRPL36Q9P0J6 103 aaKnown RBP10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 RPUSD1Q9UJJ7 312 aaKnown RBP10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 CDX4O14627 284 aaPredicted RBP10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 UBE2G1P62253 170 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 C10orf113Q5VZT2 155 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 RASL11AQ6T310 242 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 OR4F17Q8NGA8 305 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 RNASE8Q8TDE3 154 aaKnown RBP10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 NPIPB3Q92617 1050 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms