RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 HINT2Q9BX68 163 aa4.78□□□□□ -1.64
CLDND1-213ENST00000506927 MS4A6AQ9H2W1 248 aa4.78□□□□□ -1.64
CLDND1-213ENST00000506927 GNB4Q9HAV0 340 aa4.78□□□□□ -1.64
CLDND1-213ENST00000506927 LPAR2Q9HBW0 351 aa4.78□□□□□ -1.64
CLDND1-213ENST00000506927 SEPSECSQ9HD40 501 aaKnown RBP4.78□□□□□ -1.64
CLDND1-213ENST00000506927 SPRR3Q9UBC9 169 aa4.78□□□□□ -1.64
CLDND1-213ENST00000506927 IL17BQ9UHF5 180 aa4.78□□□□□ -1.64
CLDND1-213ENST00000506927 LAMTOR2Q9Y2Q5 125 aa4.78□□□□□ -1.64
CLDND1-213ENST00000506927 LINC00312Q9Y6C7 94 aa4.78□□□□□ -1.64
CLDND1-213ENST00000506927 YLPM1P49750 1951 aaKnown RBP4.78□□□□□ -1.64
CLDND1-213ENST00000506927 ARID1AO14497 2285 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 KNL1Q8NG31 2342 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 IGKV1D-17A0A075B6S4 117 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 TEX50A0A1B0GTY4 177 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 SERTM2A0A1B0GWG4 89 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 TCRBV4S1A1TA0A5B7 111 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 GRIFINA4D1Z8 144 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 K7EN84 100 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 PEX7O00628 323 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 CHEK1O14757 476 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 WNT9BO14905 357 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 HOXA3O43365 443 aaPredicted RBP4.77□□□□□ -1.65
CLDND1-213ENST00000506927 SAA2P0DJI9 122 aaPredicted RBP4.77□□□□□ -1.65
CLDND1-213ENST00000506927 CGB3P0DN86 165 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 CGB7P0DN87 165 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 IGLC2P0DOY2 106 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 IGLC3P0DOY3 106 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 IGFBP2P18065 325 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 G0S2P27469 103 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 SRIP30626 198 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 CEBPDP49716 269 aaPredicted RBP4.77□□□□□ -1.65
CLDND1-213ENST00000506927 PTTG1IPP53801 180 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 HBBP68871 147 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 LTC4SQ16873 150 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 KRTCAP3Q53RY4 240 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 SPINK9Q5DT21 86 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 GCSAMLQ5JQS6 135 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 LEMD1Q68G75 181 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 IGFL2Q6UWQ7 119 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 ZNF826PQ6ZT77 177 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 SLC25A48Q6ZT89 311 aaKnown RBP4.77□□□□□ -1.65
CLDND1-213ENST00000506927 ZNF833PQ6ZTB9 187 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 MIR17HGQ75NE6 70 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 TCF23Q7RTU1 214 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 ZADH2Q8N4Q0 377 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 LINC00311Q8N616 119 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 NHLRC2Q8NBF2 726 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 ZNF596Q8TC21 504 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 ZNF503Q96F45 646 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 C5orf30Q96GV9 206 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 GPR82Q96P67 336 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 NDFIP1Q9BT67 221 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 FAM103A1Q9BTL3 118 aaKnown RBP4.77□□□□□ -1.65
CLDND1-213ENST00000506927 TMEM70Q9BUB7 260 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 DERL1Q9BUN8 251 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 MAP1LC3CQ9BXW4 147 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 HES7Q9BYE0 225 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 NGBQ9NPG2 151 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 FSCN3Q9NQT6 498 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 ZNF71Q9NQZ8 489 aaPredicted RBP4.77□□□□□ -1.65
CLDND1-213ENST00000506927 ZNF492Q9P255 531 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 CHD7Q9P2D1 2997 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 DKK4Q9UBT3 224 aa4.77□□□□□ -1.65
CLDND1-213ENST00000506927 RPUSD1Q9UJJ7 312 aaKnown RBP4.77□□□□□ -1.65
CLDND1-213ENST00000506927 CHD3Q12873 2000 aaKnown RBP4.77□□□□□ -1.65
CLDND1-213ENST00000506927 GON4LQ3T8J9 2241 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 CABIN1Q9Y6J0 2220 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 TRBV20OR9-2A0A075B6H5 130 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 IGLV3-9A0A075B6K5 115 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 IGHV1-18A0A0C4DH31 117 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 IGHV1-69-2A0A0G2JMI3 117 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 TRBV6-1A0A0K0K1D8 114 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 MBD3L4A6NDZ8 208 aaPredicted RBP4.76□□□□□ -1.65
CLDND1-213ENST00000506927 MBD3L3A6NE82 208 aaPredicted RBP4.76□□□□□ -1.65
CLDND1-213ENST00000506927 MBD3L5A6NJ08 208 aaPredicted RBP4.76□□□□□ -1.65
CLDND1-213ENST00000506927 SLC17A3O00476 420 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 HYPMO75409 117 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 FSHBP01225 129 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 P01737 135 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 EGR1P18146 543 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 HNF1AP20823 631 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 ZNF83P51522 516 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 MFAP2P55001 183 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 TNFAIP6P98066 277 aaPredicted RBP4.76□□□□□ -1.65
CLDND1-213ENST00000506927 PAX2Q02962 417 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 RIGQ13278 110 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 PLGLAQ15195 96 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 MMDQ15546 238 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 BATFQ16520 125 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 C3AR1Q16581 482 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 RPL39P5Q59GN2 51 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 LRRC10Q5BKY1 277 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 TEX36Q5VZQ5 186 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 RBPMS2Q6ZRY4 209 aaKnown RBP4.76□□□□□ -1.65
CLDND1-213ENST00000506927 VASH2Q86V25 355 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 MOGAT3Q86VF5 341 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 LYPD1Q8N2G4 141 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 ZCCHC24Q8N2G6 241 aaKnown RBP4.76□□□□□ -1.65
CLDND1-213ENST00000506927 ARL6IP6Q8N6S5 226 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 THAP8Q8NA92 274 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms