RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 KPRPQ5T749 579 aaPredicted RBP6.52□□□□□ -1.37
PDGFC-205ENST00000506880 C10orf99Q6UWK7 81 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 ETV3LQ6ZN32 361 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 C8orf86Q6ZUL3 223 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 SCARB1Q8WTV0 552 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 MS4A10Q96PG2 267 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 SEC22CQ9BRL7 303 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 GINS3Q9BRX5 216 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 SLC25A31Q9H0C2 315 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 GNB4Q9HAV0 340 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 SLC45A2Q9UMX9 530 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 NOTCH1P46531 2555 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 TRAV25A0A0B4J276 109 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 K7EPK0 472 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 L7N2F9 121 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 GNG7O60262 68 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 MPDU1O75352 247 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 DEDDO75618 318 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 ADAP1O75689 374 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 NDUFB8O95169 186 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 MT-CO2P00403 227 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 IFNA4P05014 189 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 CLEC3BP05452 202 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 HOXD3P31249 432 aaPredicted RBP6.51□□□□□ -1.37
PDGFC-205ENST00000506880 ARL3P36405 182 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 SELENOTP62341 195 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 VAMP2P63027 116 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 DLK1P80370 383 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 IZUMO4Q1ZYL8 232 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 PXDC1Q5TGL8 231 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 ACSM6Q6P461 480 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 TMEM14EPQ6UXP3 125 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 ZNF600Q6ZNG1 722 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 STX12Q86Y82 276 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 OR10P1Q8NGE3 313 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 OR52B4Q8NGK2 314 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 CHAC2Q8WUX2 184 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 TAF15Q92804 592 aaKnown RBP eCLIP6.51□□□□□ -1.37
PDGFC-205ENST00000506880 MISP3Q96FF7 219 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 SLC35E1Q96K37 410 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 OR10C1Q96KK4 312 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 CCDC140Q96MF4 163 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 MED28Q9H204 178 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 TMEM231Q9H6L2 316 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 DAZ1Q9NQZ3 744 aaKnown RBP6.51□□□□□ -1.37
PDGFC-205ENST00000506880 LYRM2Q9NU23 88 aaPredicted RBP6.51□□□□□ -1.37
PDGFC-205ENST00000506880 DMRT1Q9Y5R6 373 aa6.51□□□□□ -1.37
PDGFC-205ENST00000506880 A0A1W2PS18 150 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 BMPR1BO00238 502 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 MBPP02686 304 aaPredicted RBP6.5□□□□□ -1.37
PDGFC-205ENST00000506880 GIPP09681 153 aaPredicted RBP6.5□□□□□ -1.37
PDGFC-205ENST00000506880 S100A11P31949 105 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 P2RY1P47900 373 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 MFAP2P55001 183 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 RAP2BP61225 183 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 RRAS2P62070 204 aaPredicted RBP6.5□□□□□ -1.37
PDGFC-205ENST00000506880 EGFEM1PQ0D2K5 195 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 SAMD13Q5VXD3 122 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 TMEM144Q7Z5S9 345 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 C11orf44Q8N8P7 122 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 OR9G4Q8NGQ1 327 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 TMEM190Q8WZ59 177 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 NARS2Q96I59 477 aaKnown RBP6.5□□□□□ -1.37
PDGFC-205ENST00000506880 TRGV9Q99603 122 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 KCNIP2Q9NS61 270 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 PSENENQ9NZ42 101 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 MRPL27Q9P0M9 148 aaKnown RBP6.5□□□□□ -1.37
PDGFC-205ENST00000506880 GSKIPQ9P0R6 139 aa6.5□□□□□ -1.37
PDGFC-205ENST00000506880 RCL1Q9Y2P8 373 aaKnown RBP6.5□□□□□ -1.37
PDGFC-205ENST00000506880 IGHV4OR15-8A0A075B7B6 117 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 A0A087WW49 117 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 A0A1W2PRX2 142 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 MFSD2BA6NFX1 497 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 PRSS46E5RG02 174 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 OR2C1O95371 312 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 TMEM50AO95807 157 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 TSPAN15O95858 294 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 REG1AP05451 166 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 CTSGP08311 255 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 C8orf88P0DMB2 117 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 APELAP0DMC3 54 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 LYL1P12980 280 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 EIF2B2P49770 351 aaKnown RBP6.49□□□□□ -1.37
PDGFC-205ENST00000506880 CMC4P56277 68 aaPredicted RBP6.49□□□□□ -1.37
PDGFC-205ENST00000506880 POLR2GP62487 172 aaKnown RBP eCLIP6.49□□□□□ -1.37
PDGFC-205ENST00000506880 RAB31Q13636 194 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 Q56UQ5 140 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 SAMD5Q5TGI4 173 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 OR8G2PQ6IF36 304 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 PRSS54Q6PEW0 395 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 CLEC19AQ6UXS0 136 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 SLC16A13Q7RTY0 426 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 THAP8Q8NA92 274 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 UXS1Q8NBZ7 420 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 OR4C12Q96R67 309 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 FAM110AQ9BQ89 295 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 NPVFQ9HCQ7 196 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 PRR13Q9NZ81 148 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 MGAT4CQ9UBM8 478 aa6.49□□□□□ -1.37
PDGFC-205ENST00000506880 ALG5Q9Y673 324 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms