RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 CIB3Q96Q77 187 aaPredicted RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 CLCC1Q96S66 551 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 CCL13Q99616 98 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 TMEM246Q9BRR3 403 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 HDHD3Q9BSH5 251 aaPredicted RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 MFFQ9GZY8 342 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 SLC25A31Q9H0C2 315 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 LINC00574Q9H8X3 128 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 ZC4H2Q9NQZ6 224 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 CCL28Q9NRJ3 127 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 COA4Q9NYJ1 87 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 CALYQ9NYX4 217 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 GSKIPQ9P0R6 139 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 CLN8Q9UBY8 286 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 KIF25Q9UIL4 384 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 MAB21L2Q9Y586 359 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 LINC00312Q9Y6C7 94 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 U3KQ87 197 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 ITPR3Q14573 2671 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 CNOT1A5YKK6 2376 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 FAM186AA6NE01 2351 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 NINQ8N4C6 2090 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 ANKRD17O75179 2603 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 DMDP11532 3685 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 SPEGQ15772 3267 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 SPTAN1Q13813 2472 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 CFAP46Q8IYW2 2715 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 EML6Q6ZMW3 1958 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 FXYD6-FXYD2A0A087WZ82 144 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 IGKV1-6A0A0C4DH72 117 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 IGHV3-64DA0A0J9YX35 117 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 FAM74A7A6NL05 159 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 DEFB108AA8MXU0 73 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 E9PLD3 99 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 C15orf65H3BRN8 121 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 TEX46H3BTG2 121 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 NDUFS8O00217 210 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 SOX15O60248 233 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 DEDDO75618 318 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 ADAP1O75689 374 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 SIX6O95475 246 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 CYB5R3P00387 301 aaPredicted RBP1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 HPRT1P00492 218 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 APOA2P02652 100 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 GYPAP02724 150 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 CGB3P0DN86 165 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 CGB7P0DN87 165 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 TPT1P13693 172 aaKnown RBP1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 RPS2P15880 293 aaKnown RBP1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 S100A1P23297 94 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 RPL12P30050 165 aaKnown RBP1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 CD80P33681 288 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 CEACAM3P40198 252 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 RPL29P47914 159 aaKnown RBP1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 CEBPDP49716 269 aaPredicted RBP1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 RAB5CP51148 216 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 RAB13P51153 203 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 AKR1C2P52895 323 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 S100A10P60903 97 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 RAB2AP61019 212 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 UBA52P62987 128 aaKnown RBP1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 HBG1P69891 147 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 HBG2P69892 147 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 TLE4Q04727 773 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 BAXQ07812 192 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF266Q14584 549 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 HERPUD1Q15011 391 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 RTL8BQ17RB0 113 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 SP6Q3SY56 376 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 LGALSLQ3ZCW2 172 aaPredicted RBP1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 FAM74A3Q4VXF1 159 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 HEPN1Q6WQI6 88 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF818PQ6ZRF7 136 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 NCCRP1Q6ZVX7 275 aaPredicted RBP1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 LYZL2Q7Z4W2 148 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 STX12Q86Y82 276 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 SELENOHQ8IZQ5 122 aaKnown RBP1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 C9orf62Q8N4C0 152 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 KCNRGQ8N5I3 272 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 DRAM1Q8N682 238 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 SLC35G3Q8N808 338 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 OR8B3Q8NGG8 313 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 OR13D1Q8NGV5 346 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 OR10X1Q8NGY0 326 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 OR52E5Q8NH55 327 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 OR4S2Q8NH73 311 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 OR9G1Q8NH87 305 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 OR1S1Q8NH92 325 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 VSTM2AQ8TAG5 236 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF596Q8TC21 504 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 TCTEX1D2Q8WW35 142 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 H1FXQ92522 213 aaKnown RBP1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 TMEM230Q96A57 120 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 C16orf74Q96GX8 76 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 COQ2Q96H96 371 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 GAFA1Q96PS6 74 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 AQP10Q96PS8 301 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 OR8B2Q96RD0 313 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 TP53RKQ96S44 253 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms