RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SLC35G3Q8N808 338 aa6.75□□□□□ -1.33
PDLIM5-209ENST00000506632 OR51S1Q8NGJ8 323 aa6.75□□□□□ -1.33
PDLIM5-209ENST00000506632 RBPMSQ93062 196 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-209ENST00000506632 RRNAD1Q96FB5 475 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-209ENST00000506632 PRRT1Q99946 306 aa6.75□□□□□ -1.33
PDLIM5-209ENST00000506632 FAM110AQ9BQ89 295 aa6.75□□□□□ -1.33
PDLIM5-209ENST00000506632 GGTLC1Q9BX51 225 aa6.75□□□□□ -1.33
PDLIM5-209ENST00000506632 C6orf62Q9GZU0 229 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-209ENST00000506632 RSL24D1Q9UHA3 163 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-209ENST00000506632 C14orf166Q9Y224 244 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-209ENST00000506632 LOC102724200A0A096LPH7 203 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 CHEK1O14757 476 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 GNG7O60262 68 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 SNCAP37840 140 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 ETV6P41212 452 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 NPBWR1P48145 328 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 SPCS3P61009 180 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 DHODHQ02127 395 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 FAM90A2PQ658T7 463 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 ZFAND6Q6FIF0 208 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 LAMTOR1Q6IAA8 161 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 TMEM116Q8NCL8 245 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 DUSP18Q8NEJ0 188 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 OR52E5Q8NH55 327 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 TMEM230Q96A57 120 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 PINX1Q96BK5 328 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 GALNT14Q96FL9 552 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 RNF2Q99496 336 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 PDCD10Q9BUL8 212 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 RHPN1-AS1Q9BWJ2 59 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 FNDC4Q9H6D8 234 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 TMEM56-RWDD3S4R434 201 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 STARD9Q9P2P6 4700 aa6.74□□□□□ -1.33
PDLIM5-209ENST00000506632 OR4C46A6NHA9 309 aa6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 CORTO00230 105 aa6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 NOL3O60936 208 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 TMEM50AO95807 157 aa6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 HOXA1P49639 335 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 SUB1P53999 127 aaKnown RBP eCLIP6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 TMEM187Q14656 261 aa6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 TOMM20LQ6UXN7 152 aa6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 ZNF600Q6ZNG1 722 aa6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 MCFD2Q8NI22 146 aa6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 IL22RA2Q969J5 263 aa6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 TRIM63Q969Q1 353 aa6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 GPR146Q96CH1 333 aa6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 OVOL2Q9BRP0 275 aa6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 VSIRQ9H7M9 311 aa6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 MRPL36Q9P0J6 103 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 CACNG5Q9UF02 275 aa6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 UBQLN2Q9UHD9 624 aa6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 LYSTQ99698 3801 aa6.73□□□□□ -1.33
PDLIM5-209ENST00000506632 IGHV3-49A0A0A0MS15 119 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 TRAV14DV4A0A0A6YYC5 116 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 KIR2DL5BA0A0G2JN68 375 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 KIR2DL5BA0A0G2JPC4 375 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 LCE6AA0A183 80 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 A0A1B0GU03 582 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 FABP12A6NFH5 140 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 CLN5O75503 358 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 YIF1AO95070 293 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 SUPT4H1P63272 117 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 KLF9Q13886 244 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 C2orf83Q53S99 150 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 TMEM268Q5VZI3 342 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 WFDC3Q8IUB2 231 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 KIR2DL5AQ8N109 375 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 OR4X1Q8NH49 305 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 KIR2DL5BQ8NHK3 375 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 RNASE11Q8TAA1 199 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 RNF141Q8WVD5 230 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 GINS3Q9BRX5 216 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 RBM38Q9H0Z9 239 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 ENY2Q9NPA8 101 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 PRR13Q9NZ81 148 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 SCP2D1Q9UJQ7 156 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 TP53TG1Q9Y2A0 90 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 PUS1Q9Y606 427 aaKnown RBP eCLIP6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 V9GYH0 126 aa6.72□□□□□ -1.33
PDLIM5-209ENST00000506632 IGKV1-17P01599 117 aa6.71□□□□□ -1.34
PDLIM5-209ENST00000506632 APOHP02749 345 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-209ENST00000506632 CD5P06127 495 aa6.71□□□□□ -1.34
PDLIM5-209ENST00000506632 OPRK1P41145 380 aa6.71□□□□□ -1.34
PDLIM5-209ENST00000506632 HTR2BP41595 481 aa6.71□□□□□ -1.34
PDLIM5-209ENST00000506632 ODF1Q14990 250 aa6.71□□□□□ -1.34
PDLIM5-209ENST00000506632 ZNF79Q15937 498 aa6.71□□□□□ -1.34
PDLIM5-209ENST00000506632 MLANAQ16655 118 aa6.71□□□□□ -1.34
PDLIM5-209ENST00000506632 NMSQ5H8A3 153 aa6.71□□□□□ -1.34
PDLIM5-209ENST00000506632 Q6ZWC4 215 aa6.71□□□□□ -1.34
PDLIM5-209ENST00000506632 CLRN3Q8NCR9 226 aa6.71□□□□□ -1.34
PDLIM5-209ENST00000506632 TMEM170AQ8WVE7 144 aa6.71□□□□□ -1.34
PDLIM5-209ENST00000506632 ST8SIA2Q92186 375 aa6.71□□□□□ -1.34
PDLIM5-209ENST00000506632 SCGB3A2Q96PL1 93 aa6.71□□□□□ -1.34
PDLIM5-209ENST00000506632 KCNIP3Q9Y2W7 256 aa6.71□□□□□ -1.34
PDLIM5-209ENST00000506632 RYR2Q92736 4967 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 DNAH1Q9P2D7 4330 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 SACSQ9NZJ4 4579 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 IGHV3OR16-13A0A075B7E8 117 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 IGHV3-74A0A0B4J1X5 117 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms