RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 C20orf27Q9GZN8 174 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR51E2Q9H255 320 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 FBXL15Q9H469 300 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 DAZ1Q9NQZ3 744 aaKnown RBP1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 ACER3Q9NUN7 267 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 MED29Q9NX70 200 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 MARCOQ9UEW3 520 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 POMPQ9Y244 141 aa1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 SOX21Q9Y651 276 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 V9GYY5 206 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC11-205ENST00000506426 IGKV1D-42A0A075B6H8 117 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 IGHV3OR16-8A0A075B7F1 116 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 MDFIC2A0A1B0GVS7 189 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 A8MUU9 505 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 K7ERS5 55 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 M0R233 179 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 KPNA4O00629 521 aaPredicted RBP1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 AHSA1O95433 338 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 ATP6V1G2O95670 118 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 MSMBP08118 114 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 IFI6P09912 130 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 FREM3P0C091 2139 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 CD79AP11912 226 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 PTHLHP12272 177 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 ZNF3P17036 446 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 PRPS1L1P21108 318 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 COL8A2P25067 703 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 CNTFRP26992 372 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 GRPRP30550 384 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 PSMD7P51665 324 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 POLR2HP52434 150 aaKnown RBP1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 H3F3AP84243 136 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 FAM3AP98173 230 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 ARHGAP11BQ3KRB8 267 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 CCDC153Q494R4 210 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 LIN52Q52LA3 116 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 SPRNQ5BIV9 151 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 C1orf140Q5VVS0 124 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 TBPL2Q6SJ96 375 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 FAM131AQ6UXB0 335 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 DPPA2Q7Z7J5 298 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 SGPP2Q8IWX5 399 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 IFT20Q8IY31 132 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 AMN1Q8IY45 258 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 C10orf111Q8N326 155 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR5L1Q8NGL2 311 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR2K2Q8NGT1 345 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR8S1Q8NH09 359 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 ANP32BQ92688 251 aaKnown RBP1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 RBPMSQ93062 196 aaKnown RBP1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 MAL2Q969L2 176 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 WFDC6Q9BQY6 131 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 SCRT1Q9BWW7 348 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 RSPO3Q9BXY4 272 aaPredicted RBP1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 SLC19A3Q9BZV2 496 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 DPY30Q9C005 99 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 UBAP1Q9NZ09 502 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 PRO0461Q9UI25 63 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 ZNF443Q9Y2A4 671 aaPredicted RBP1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 SLC35A3Q9Y2D2 325 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 HDGFL3Q9Y3E1 203 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 DSPPQ9NZW4 1301 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 NBEAL2Q6ZNJ1 2754 aa1.86□□□□□ -2.11
TRAPPC11-205ENST00000506426 PKD1L1Q8TDX9 2849 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 A0A1B0GWA3 101 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 LEUTXA8MZ59 168 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 C16orf90A8MZG2 172 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 B4DSR2 109 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 IGLL5B9A064 214 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 C8orf87E5RJ46 101 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 H3BQF6 201 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 FGF16O43320 207 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 ADAP1O75689 374 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 HLA-AP01891 365 aaKnown RBP1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 OPN1SWP03999 348 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 DBIP07108 87 aaKnown RBP1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 BPGMP07738 259 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 NQO1P15559 274 aaKnown RBP1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 CBR1P16152 277 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 ZNF14P17017 642 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 RPS4Y1P22090 263 aaKnown RBP1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 S100A3P33764 101 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 GDI2P50395 445 aaKnown RBP1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 COPZ1P61923 177 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 CCL8P80075 99 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 DEFA6Q01524 100 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 EMX2Q04743 252 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 FMODQ06828 376 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 MED21Q13503 144 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 C1DQ13901 141 aaKnown RBP1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 ENDOGQ14249 297 aaKnown RBP1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 CASP8Q14790 479 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 DNLZQ5SXM8 178 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 SPINT4Q6UDR6 99 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 TMEM144Q7Z5S9 345 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 LRRC34Q8IZ02 419 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 RNF182Q8N6D2 247 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 CLDN22Q8N7P3 220 aa1.85□□□□□ -2.11
TRAPPC11-205ENST00000506426 SIGLECL1Q8N7X8 197 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms