RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 IFNA10P01566 189 aa12.66□□□□□ -0.38
SNCA-209ENST00000506244 IFNA21P01568 189 aa12.66□□□□□ -0.38
SNCA-209ENST00000506244 TCRBP04435 133 aa12.66□□□□□ -0.38
SNCA-209ENST00000506244 CTSGP08311 255 aa12.66□□□□□ -0.38
SNCA-209ENST00000506244 HOXB5P09067 269 aa12.66□□□□□ -0.38
SNCA-209ENST00000506244 ANXA7P20073 488 aaKnown RBP12.66□□□□□ -0.38
SNCA-209ENST00000506244 CBLN1P23435 193 aa12.66□□□□□ -0.38
SNCA-209ENST00000506244 ADMP35318 185 aa12.66□□□□□ -0.38
SNCA-209ENST00000506244 ETFRF1Q6IPR1 90 aa12.66□□□□□ -0.38
SNCA-209ENST00000506244 UNQ9165/PRO28630Q6UXU0 137 aa12.66□□□□□ -0.38
SNCA-209ENST00000506244 GTSCR1Q86UQ5 136 aa12.66□□□□□ -0.38
SNCA-209ENST00000506244 RBKSQ9H477 322 aa12.66□□□□□ -0.38
SNCA-209ENST00000506244 SMAD5-AS1Q9Y6J3 95 aa12.66□□□□□ -0.38
SNCA-209ENST00000506244 FAM240BA0A1B0GVZ2 78 aa12.65□□□□□ -0.38
SNCA-209ENST00000506244 PITX3O75364 302 aa12.65□□□□□ -0.38
SNCA-209ENST00000506244 UPK1BO75841 260 aa12.65□□□□□ -0.38
SNCA-209ENST00000506244 SLC25A4P12235 298 aa12.65□□□□□ -0.38
SNCA-209ENST00000506244 ASAH1Q13510 395 aa12.65□□□□□ -0.38
SNCA-209ENST00000506244 GGNBP1Q5YKI7 109 aa12.65□□□□□ -0.38
SNCA-209ENST00000506244 CIB3Q96Q77 187 aaPredicted RBP12.65□□□□□ -0.38
SNCA-209ENST00000506244 B9D2Q9BPU9 175 aa12.65□□□□□ -0.38
SNCA-209ENST00000506244 NUDT15Q9NV35 164 aa12.65□□□□□ -0.38
SNCA-209ENST00000506244 MRPL27Q9P0M9 148 aaKnown RBP12.65□□□□□ -0.38
SNCA-209ENST00000506244 LSM4Q9Y4Z0 139 aaKnown RBP12.65□□□□□ -0.38
SNCA-209ENST00000506244 C15orf62A8K5M9 175 aa12.64□□□□□ -0.39
SNCA-209ENST00000506244 IGHV3-48P01763 117 aa12.64□□□□□ -0.39
SNCA-209ENST00000506244 CD69Q07108 199 aa12.64□□□□□ -0.39
SNCA-209ENST00000506244 CD300EQ496F6 205 aaPredicted RBP12.64□□□□□ -0.39
SNCA-209ENST00000506244 TM4SF20Q53R12 229 aa12.64□□□□□ -0.39
SNCA-209ENST00000506244 ADAMTSL5Q6ZMM2 481 aa12.64□□□□□ -0.39
SNCA-209ENST00000506244 UXS1Q8NBZ7 420 aa12.64□□□□□ -0.39
SNCA-209ENST00000506244 OR4X1Q8NH49 305 aa12.64□□□□□ -0.39
SNCA-209ENST00000506244 CACNG8Q8WXS5 425 aa12.64□□□□□ -0.39
SNCA-209ENST00000506244 GINS3Q9BRX5 216 aa12.64□□□□□ -0.39
SNCA-209ENST00000506244 C20orf24Q9BUV8 137 aa12.64□□□□□ -0.39
SNCA-209ENST00000506244 TRAV30A0A087WSZ9 112 aa12.63□□□□□ -0.39
SNCA-209ENST00000506244 K7EMT4 169 aa12.63□□□□□ -0.39
SNCA-209ENST00000506244 CLN5O75503 358 aa12.63□□□□□ -0.39
SNCA-209ENST00000506244 YIF1AO95070 293 aa12.63□□□□□ -0.39
SNCA-209ENST00000506244 BMI1P35226 326 aa12.63□□□□□ -0.39
SNCA-209ENST00000506244 RPP30P78346 268 aaKnown RBP12.63□□□□□ -0.39
SNCA-209ENST00000506244 DEFB114Q30KQ6 69 aa12.63□□□□□ -0.39
SNCA-209ENST00000506244 ZNF600Q6ZNG1 722 aa12.63□□□□□ -0.39
SNCA-209ENST00000506244 ENKURQ8TC29 256 aa12.63□□□□□ -0.39
SNCA-209ENST00000506244 MITD1Q8WV92 249 aa12.63□□□□□ -0.39
SNCA-209ENST00000506244 FNDC4Q9H6D8 234 aaPredicted RBP12.63□□□□□ -0.39
SNCA-209ENST00000506244 TBC1D24Q9ULP9 559 aa12.63□□□□□ -0.39
SNCA-209ENST00000506244 TRAV6A0A075B6T7 132 aa12.62□□□□□ -0.39
SNCA-209ENST00000506244 C8orf88P0DMB2 117 aa12.62□□□□□ -0.39
SNCA-209ENST00000506244 RAB11AP62491 216 aa12.62□□□□□ -0.39
SNCA-209ENST00000506244 BTNL8Q6UX41 500 aa12.62□□□□□ -0.39
SNCA-209ENST00000506244 TRAV25A0A0B4J276 109 aa12.61□□□□□ -0.39
SNCA-209ENST00000506244 WRBO00258 174 aa12.61□□□□□ -0.39
SNCA-209ENST00000506244 SYNGR2O43760 224 aa12.61□□□□□ -0.39
SNCA-209ENST00000506244 ADAP1O75689 374 aa12.61□□□□□ -0.39
SNCA-209ENST00000506244 IFNA4P05014 189 aa12.61□□□□□ -0.39
SNCA-209ENST00000506244 H2AFB2P0C5Z0 115 aa12.61□□□□□ -0.39
SNCA-209ENST00000506244 DEFA1P59665 94 aa12.61□□□□□ -0.39
SNCA-209ENST00000506244 DEFA3P59666 94 aa12.61□□□□□ -0.39
SNCA-209ENST00000506244 GUCA2BQ16661 112 aa12.61□□□□□ -0.39
SNCA-209ENST00000506244 RBPMS2Q6ZRY4 209 aaKnown RBP12.61□□□□□ -0.39
SNCA-209ENST00000506244 OR10C1Q96KK4 312 aa12.61□□□□□ -0.39
SNCA-209ENST00000506244 MLXQ9UH92 298 aa12.61□□□□□ -0.39
SNCA-209ENST00000506244 IZUMO1RA6ND01 250 aa12.6□□□□□ -0.39
SNCA-209ENST00000506244 TMEM50AO95807 157 aa12.6□□□□□ -0.39
SNCA-209ENST00000506244 IAPPP10997 89 aa12.6□□□□□ -0.39
SNCA-209ENST00000506244 EDN2P20800 178 aa12.6□□□□□ -0.39
SNCA-209ENST00000506244 RND2P52198 227 aa12.6□□□□□ -0.39
SNCA-209ENST00000506244 LAMTOR1Q6IAA8 161 aa12.6□□□□□ -0.39
SNCA-209ENST00000506244 SLC16A13Q7RTY0 426 aa12.6□□□□□ -0.39
SNCA-209ENST00000506244 TMEM61Q8N0U2 210 aa12.6□□□□□ -0.39
SNCA-209ENST00000506244 TMEM116Q8NCL8 245 aa12.6□□□□□ -0.39
SNCA-209ENST00000506244 OR1S2Q8NGQ3 325 aa12.6□□□□□ -0.39
SNCA-209ENST00000506244 TMEM170AQ8WVE7 144 aa12.6□□□□□ -0.39
SNCA-209ENST00000506244 NKX2-1P43699 371 aaPredicted RBP12.59□□□□□ -0.39
SNCA-209ENST00000506244 PRSS54Q6PEW0 395 aa12.59□□□□□ -0.39
SNCA-209ENST00000506244 OR52B4Q8NGK2 314 aa12.59□□□□□ -0.39
SNCA-209ENST00000506244 ZNF431Q8TF32 576 aaPredicted RBP12.59□□□□□ -0.39
SNCA-209ENST00000506244 WDR89Q96FK6 387 aaPredicted RBP12.59□□□□□ -0.39
SNCA-209ENST00000506244 PUS1Q9Y606 427 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNCA-209ENST00000506244 IGHV3OR16-8A0A075B7F1 116 aa12.58□□□□□ -0.4
SNCA-209ENST00000506244 TRAV14DV4A0A0A6YYC5 116 aa12.58□□□□□ -0.4
SNCA-209ENST00000506244 IGHV7-4-1A0A0J9YVY3 117 aa12.58□□□□□ -0.4
SNCA-209ENST00000506244 OR10J1P30954 320 aa12.58□□□□□ -0.4
SNCA-209ENST00000506244 GPX4P36969 197 aaPredicted RBP12.58□□□□□ -0.4
SNCA-209ENST00000506244 CD81P60033 236 aa12.58□□□□□ -0.4
SNCA-209ENST00000506244 IAH1Q2TAA2 248 aaPredicted RBP12.58□□□□□ -0.4
SNCA-209ENST00000506244 C11orf87Q6NUJ2 197 aa12.58□□□□□ -0.4
SNCA-209ENST00000506244 OR4D5Q8NGN0 318 aa12.58□□□□□ -0.4
SNCA-209ENST00000506244 ACY3Q96HD9 319 aa12.58□□□□□ -0.4
SNCA-209ENST00000506244 SLC35E1Q96K37 410 aa12.58□□□□□ -0.4
SNCA-209ENST00000506244 SPAG8Q99932 426 aaPredicted RBP12.58□□□□□ -0.4
SNCA-209ENST00000506244 MAGT1Q9H0U3 335 aa12.58□□□□□ -0.4
SNCA-209ENST00000506244 PAIP2BQ9ULR5 123 aaKnown RBP12.58□□□□□ -0.4
SNCA-209ENST00000506244 TGP01266 2768 aa12.58□□□□□ -0.4
SNCA-209ENST00000506244 MPTX1A8MV57 137 aa12.57□□□□□ -0.4
SNCA-209ENST00000506244 ZNF207O43670 478 aaKnown RBP12.57□□□□□ -0.4
SNCA-209ENST00000506244 CD5P06127 495 aa12.57□□□□□ -0.4
SNCA-209ENST00000506244 IGLC1P0CG04 106 aa12.57□□□□□ -0.4
SNCA-209ENST00000506244 NHLRC4P0CG21 123 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms