RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 TMEM41BQ5BJD5 291 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 TRIQKQ629K1 86 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 FAM90A2PQ658T7 463 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 LEMD1Q68G75 181 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 OR4A47Q6IF82 309 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 LPCAT3Q6P1A2 487 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 CLEC19AQ6UXS0 136 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 ZNF705AQ6ZN79 300 aaPredicted RBP2.23□□□□□ -2.05
TCOF1-208ENST00000506063 C19orf35Q6ZS72 473 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 SPAG16Q8N0X2 631 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 ARRDC1Q8N5I2 433 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 CCDC71LQ8N9Z2 235 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 ZNF383Q8NA42 475 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 ZBTB34Q8NCN2 500 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 DMBX1Q8NFW5 382 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 OR5AP2Q8NGF4 316 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 OR6F1Q8NGZ6 308 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 CIRBP-AS1Q8TBR5 109 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 NTN5Q8WTR8 489 aaPredicted RBP2.23□□□□□ -2.05
TCOF1-208ENST00000506063 RNF141Q8WVD5 230 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 SRSF12Q8WXF0 261 aaKnown RBP2.23□□□□□ -2.05
TCOF1-208ENST00000506063 MOB3AQ96BX8 217 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 TMEM68Q96MH6 324 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 NEU1Q99519 415 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 TSC22D3Q99576 134 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 ZNF2Q9BSG1 426 aaPredicted RBP2.23□□□□□ -2.05
TCOF1-208ENST00000506063 PDCD10Q9BUL8 212 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 ZNF436Q9C0F3 470 aaPredicted RBP2.23□□□□□ -2.05
TCOF1-208ENST00000506063 COMMD5Q9GZQ3 224 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 FXYD6Q9H0Q3 95 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 MAGT1Q9H0U3 335 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 HRASLSQ9HDD0 168 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 COPZ2Q9P299 210 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 RSL24D1Q9UHA3 163 aaKnown RBP2.23□□□□□ -2.05
TCOF1-208ENST00000506063 KLK9Q9UKQ9 250 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 C14orf166Q9Y224 244 aaKnown RBP2.23□□□□□ -2.05
TCOF1-208ENST00000506063 KCNK7Q9Y2U2 307 aa2.23□□□□□ -2.05
TCOF1-208ENST00000506063 IGKV1D-8A0A087WSZ0 117 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 IGKV1D-13A0A0B4J2D9 117 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 RPS10-NUDT3A0A1W2PQS6 291 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 MARCH11A6NNE9 402 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 H3BMQ9 156 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 GABARAPH6UMI1 98 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 RBFOX2O43251 390 aaKnown RBP eCLIP2.22□□□□□ -2.05
TCOF1-208ENST00000506063 SSX5O60225 188 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 B3GALNT1O75752 331 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 SNAPC5O75971 98 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 OR2J3O76001 311 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 RAB3DO95716 219 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 NUDT3O95989 172 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 HPRT1P00492 218 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 HLA-DQB1P01920 261 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 PMP2P02689 132 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 REG1AP05451 166 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 SERPINE2P07093 398 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 IGKV1-13P0DP09 117 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 SPP1P10451 314 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 ANXA3P12429 323 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 DEFA4P12838 97 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 NQO2P16083 231 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 HLA-GP17693 338 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 HLA-DMAP28067 261 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 PSMB6P28072 239 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 RPS19P39019 145 aaKnown RBP2.22□□□□□ -2.05
TCOF1-208ENST00000506063 ALDH3B2P48448 385 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 HOXA1P49639 335 aaPredicted RBP2.22□□□□□ -2.05
TCOF1-208ENST00000506063 KRTAP10-8P60410 259 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 RPL8P62917 257 aaKnown RBP2.22□□□□□ -2.05
TCOF1-208ENST00000506063 SRPXP78539 464 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 CTF1Q16619 201 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 PRSS8Q16651 343 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 ESRGQ1W209 222 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 TRIM16LQ309B1 348 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 PHLDA2Q53GA4 152 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 SPANXN2Q5MJ10 180 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 IDO2Q6ZQW0 420 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 ZNF818PQ6ZRF7 136 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 SSX9Q7RTT3 188 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 HSD17B13Q7Z5P4 300 aaPredicted RBP2.22□□□□□ -2.05
TCOF1-208ENST00000506063 SLC35G3Q8N808 338 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 TEX45Q8NA69 505 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 MCFD2Q8NI22 146 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 GPX8Q8TED1 209 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 SMIM4Q8WVI0 70 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 GIMAP1Q8WWP7 306 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 FCAMRQ8WWV6 532 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 TMEM190Q8WZ59 177 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 LSM10Q969L4 123 aaKnown RBP2.22□□□□□ -2.05
TCOF1-208ENST00000506063 ZNF486Q96H40 463 aaPredicted RBP2.22□□□□□ -2.05
TCOF1-208ENST00000506063 DIRAS2Q96HU8 199 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 CYYR1Q96J86 154 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 LINC01600Q96MT4 127 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 SCGB3A2Q96PL1 93 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 UHRF2Q96PU4 802 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 OR2A7Q96R45 310 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 RNF2Q99496 336 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 PRRT1Q99946 306 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 AGMATQ9BSE5 352 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 HINT2Q9BX68 163 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 QTRT1Q9BXR0 403 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms