RNA–Protein interactions for RNA: ENST00000505617.5

APBB3-210, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-210	ENST00000505617	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
APBB3-210	ENST00000505617	FRAS1	Q86XX4	4008 aa		11.16	□□□□□ -0.62
APBB3-210	ENST00000505617		A0A0B4J293	547 aa		11.16	□□□□□ -0.62
APBB3-210	ENST00000505617	C3orf85	A0A1B0GTC6	90 aa		11.16	□□□□□ -0.62
APBB3-210	ENST00000505617	MPTX1	A8MV57	137 aa		11.16	□□□□□ -0.62
APBB3-210	ENST00000505617	INS-IGF2	F8WCM5	200 aa		11.16	□□□□□ -0.62
APBB3-210	ENST00000505617	GABARAP	H6UMI1	98 aa		11.16	□□□□□ -0.62
APBB3-210	ENST00000505617	CD5	P06127	495 aa		11.16	□□□□□ -0.62
APBB3-210	ENST00000505617	PAFAH1B2	P68402	229 aa		11.16	□□□□□ -0.62
APBB3-210	ENST00000505617	CCDC71L	Q8N9Z2	235 aa		11.16	□□□□□ -0.62
APBB3-210	ENST00000505617	RNASE11	Q8TAA1	199 aa	Known RBP	11.16	□□□□□ -0.62
APBB3-210	ENST00000505617	CSTL1	Q9H114	145 aa		11.16	□□□□□ -0.62
APBB3-210	ENST00000505617	ZFAND3	Q9H8U3	227 aa		11.16	□□□□□ -0.62
APBB3-210	ENST00000505617	COPZ2	Q9P299	210 aa		11.16	□□□□□ -0.62
APBB3-210	ENST00000505617	MTFP1	Q9UDX5	166 aa		11.16	□□□□□ -0.62
APBB3-210	ENST00000505617	AGRN	O00468	2067 aa		11.16	□□□□□ -0.62
APBB3-210	ENST00000505617	IGHV3-66	A0A0C4DH42	116 aa		11.15	□□□□□ -0.62
APBB3-210	ENST00000505617	CORT	O00230	105 aa		11.15	□□□□□ -0.62
APBB3-210	ENST00000505617	RNASE2	P10153	161 aa	Known RBP	11.15	□□□□□ -0.62
APBB3-210	ENST00000505617	SCGB2B2	Q4G0G5	96 aa		11.15	□□□□□ -0.62
APBB3-210	ENST00000505617	CCDC190	Q86UF4	302 aa		11.15	□□□□□ -0.62
APBB3-210	ENST00000505617	OR4D10	Q8NGI6	311 aa		11.15	□□□□□ -0.62
APBB3-210	ENST00000505617	OR13C8	Q8NGS7	320 aa		11.15	□□□□□ -0.62
APBB3-210	ENST00000505617	GATAD1	Q8WUU5	269 aa		11.15	□□□□□ -0.62
APBB3-210	ENST00000505617	SMIM4	Q8WVI0	70 aa		11.15	□□□□□ -0.62
APBB3-210	ENST00000505617	RRNAD1	Q96FB5	475 aa	Known RBP	11.15	□□□□□ -0.62
APBB3-210	ENST00000505617	VSIR	Q9H7M9	311 aa		11.15	□□□□□ -0.62
APBB3-210	ENST00000505617	ENY2	Q9NPA8	101 aa		11.15	□□□□□ -0.62
APBB3-210	ENST00000505617		V9GYH0	126 aa		11.15	□□□□□ -0.62
APBB3-210	ENST00000505617	CTDSPL	O15194	276 aa		11.14	□□□□□ -0.63
APBB3-210	ENST00000505617	APOH	P02749	345 aa	Predicted RBP	11.14	□□□□□ -0.63
APBB3-210	ENST00000505617	UCP1	P25874	307 aa		11.14	□□□□□ -0.63
APBB3-210	ENST00000505617	OPRK1	P41145	380 aa		11.14	□□□□□ -0.63
APBB3-210	ENST00000505617	ETV6	P41212	452 aa		11.14	□□□□□ -0.63
APBB3-210	ENST00000505617	SUB1	P53999	127 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
APBB3-210	ENST00000505617	SP6	Q3SY56	376 aa		11.14	□□□□□ -0.63
APBB3-210	ENST00000505617	PVRIG	Q6DKI7	326 aa		11.14	□□□□□ -0.63
APBB3-210	ENST00000505617	ZFAND1	Q8TCF1	268 aa		11.14	□□□□□ -0.63
APBB3-210	ENST00000505617	SOST	Q9BQB4	213 aa		11.14	□□□□□ -0.63
APBB3-210	ENST00000505617	MS4A6A	Q9H2W1	248 aa		11.14	□□□□□ -0.63
APBB3-210	ENST00000505617	TMEM231	Q9H6L2	316 aa		11.14	□□□□□ -0.63
APBB3-210	ENST00000505617	KMT2A	Q03164	3969 aa		11.14	□□□□□ -0.63
APBB3-210	ENST00000505617		A0A0G2JRQ6	117 aa		11.13	□□□□□ -0.63
APBB3-210	ENST00000505617		A0A1B0GU03	582 aa		11.13	□□□□□ -0.63
APBB3-210	ENST00000505617	DNASE2	O00115	360 aa	Predicted RBP	11.13	□□□□□ -0.63
APBB3-210	ENST00000505617	DFFB	O76075	338 aa		11.13	□□□□□ -0.63
APBB3-210	ENST00000505617	RAB3D	O95716	219 aa		11.13	□□□□□ -0.63
APBB3-210	ENST00000505617	CA1	P00915	261 aa	Predicted RBP	11.13	□□□□□ -0.63
APBB3-210	ENST00000505617	CD74	P04233	296 aa		11.13	□□□□□ -0.63
APBB3-210	ENST00000505617	TAS2R19	P59542	299 aa		11.13	□□□□□ -0.63
APBB3-210	ENST00000505617	RPL11	P62913	178 aa	Known RBP	11.13	□□□□□ -0.63
APBB3-210	ENST00000505617	LILRB2	Q8N423	598 aa		11.13	□□□□□ -0.63
APBB3-210	ENST00000505617	TMEM229B	Q8NBD8	167 aa		11.13	□□□□□ -0.63
APBB3-210	ENST00000505617	TERB2	Q8NHR7	220 aa		11.13	□□□□□ -0.63
APBB3-210	ENST00000505617	MARCH1	Q8TCQ1	289 aa		11.13	□□□□□ -0.63
APBB3-210	ENST00000505617	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.13	□□□□□ -0.63
APBB3-210	ENST00000505617	RARRES2	Q99969	163 aa		11.13	□□□□□ -0.63
APBB3-210	ENST00000505617	C11orf68	Q9H3H3	251 aa	Known RBP	11.13	□□□□□ -0.63
APBB3-210	ENST00000505617	TRAV2	A0A0B4J234	112 aa		11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	GSTZ1	O43708	216 aa	Predicted RBP	11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	SCGB2A1	O75556	95 aa		11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	B3GALNT1	O75752	331 aa		11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	TMEM50A	O95807	157 aa		11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	DEFB131A	P59861	70 aa		11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	SSBP1	Q04837	148 aa	Known RBP	11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	ZNF79	Q15937	498 aa		11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	LEMD1	Q68G75	181 aa		11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	STEAP1B	Q6NZ63	245 aa		11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	FAM24B	Q8N5W8	94 aa		11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	OR11H2	Q8NH07	326 aa		11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	PTTG2	Q9NZH5	202 aa		11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	MRPL36	Q9P0J6	103 aa	Known RBP	11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	RABAC1	Q9UI14	185 aa		11.12	□□□□□ -0.63
APBB3-210	ENST00000505617	CLN5	O75503	358 aa		11.11	□□□□□ -0.63
APBB3-210	ENST00000505617	OR5AC1	P0C628	307 aa		11.11	□□□□□ -0.63
APBB3-210	ENST00000505617	BSX	Q3C1V8	233 aa		11.11	□□□□□ -0.63
APBB3-210	ENST00000505617	FAAP20	Q6NZ36	180 aa		11.11	□□□□□ -0.63
APBB3-210	ENST00000505617	STXBP6	Q8NFX7	210 aa		11.11	□□□□□ -0.63
APBB3-210	ENST00000505617	OR4X1	Q8NH49	305 aa		11.11	□□□□□ -0.63
APBB3-210	ENST00000505617	METTL26	Q96S19	204 aa		11.11	□□□□□ -0.63
APBB3-210	ENST00000505617	TMEM222	Q9H0R3	208 aa		11.11	□□□□□ -0.63
APBB3-210	ENST00000505617	C14orf166	Q9Y224	244 aa	Known RBP	11.11	□□□□□ -0.63
APBB3-210	ENST00000505617		A0A1W2PS18	150 aa		11.1	□□□□□ -0.63
APBB3-210	ENST00000505617	AKAIN1	P0CW23	69 aa		11.1	□□□□□ -0.63
APBB3-210	ENST00000505617	NPPC	P23582	126 aa		11.1	□□□□□ -0.63
APBB3-210	ENST00000505617	P2RY1	P47900	373 aa		11.1	□□□□□ -0.63
APBB3-210	ENST00000505617	INPP1	P49441	399 aa		11.1	□□□□□ -0.63
APBB3-210	ENST00000505617	SPCS3	P61009	180 aa		11.1	□□□□□ -0.63
APBB3-210	ENST00000505617	TMEM187	Q14656	261 aa		11.1	□□□□□ -0.63
APBB3-210	ENST00000505617	MEF2D	Q14814	521 aa		11.1	□□□□□ -0.63
APBB3-210	ENST00000505617	FAM219A	Q8IW50	185 aa		11.1	□□□□□ -0.63
APBB3-210	ENST00000505617	NARS2	Q96I59	477 aa	Known RBP	11.1	□□□□□ -0.63
APBB3-210	ENST00000505617	SRR	Q9GZT4	340 aa		11.1	□□□□□ -0.63
APBB3-210	ENST00000505617	MFF	Q9GZY8	342 aa		11.1	□□□□□ -0.63
APBB3-210	ENST00000505617	FBXL17	Q9UF56	701 aa		11.1	□□□□□ -0.63
APBB3-210	ENST00000505617	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.09	□□□□□ -0.63
APBB3-210	ENST00000505617	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.09	□□□□□ -0.63
APBB3-210	ENST00000505617	ANKRD20A5P	A0PJZ0	165 aa		11.09	□□□□□ -0.63
APBB3-210	ENST00000505617	DISC1	C4P0D8	188 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms