RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 CTSGP08311 255 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 ZNF705DP0CH99 300 aaPredicted RBP4.86□□□□□ -1.63
VCAN-206ENST00000505615 ZNF705BP0CI00 300 aaPredicted RBP4.86□□□□□ -1.63
VCAN-206ENST00000505615 EMP1P54849 157 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 PAFAH1B2P68402 229 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 EIF4EBP1Q13541 118 aaPredicted RBP4.86□□□□□ -1.63
VCAN-206ENST00000505615 OXA1LQ15070 435 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 YIF1BQ5BJH7 314 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 ACTL10Q5JWF8 245 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 C1orf100Q5SVJ3 147 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 UBE2UQ5VVX9 321 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 PRR27Q6MZM9 219 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 ZNF705AQ6ZN79 300 aaPredicted RBP4.86□□□□□ -1.63
VCAN-206ENST00000505615 Q6ZRN7 208 aaPredicted RBP4.86□□□□□ -1.63
VCAN-206ENST00000505615 AMIGO2Q86SJ2 522 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 H1FOOQ8IZA3 346 aaPredicted RBP4.86□□□□□ -1.63
VCAN-206ENST00000505615 FAM89BQ8N5H3 189 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 ZFP41Q8N8Y5 198 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 GDPD1Q8N9F7 314 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 OR10J5Q8NHC4 309 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 SCARB1Q8WTV0 552 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 DAZAP1Q96EP5 407 aaKnown RBP4.86□□□□□ -1.63
VCAN-206ENST00000505615 GRAMD2BQ96HH9 432 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 ARHGAP5-AS1Q96IT6 56 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 CMSS1Q9BQ75 279 aaKnown RBP4.86□□□□□ -1.63
VCAN-206ENST00000505615 DCUN1D5Q9BTE7 237 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 C21orf62Q9NYP8 219 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 LINC00588Q9Y4M8 146 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 TEX48A0A1B0GUV7 120 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 TMEM189A5PLL7 270 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 SNTNA6NMZ2 147 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 CD5P06127 495 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 ZNF688P0C7X2 276 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 CRHBPP24387 322 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 HAMPP81172 84 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 WT1-ASQ06250 92 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 PLA2G7Q13093 441 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 TIMM50Q3ZCQ8 353 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 CCDC190Q86UF4 302 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 NOXA1Q86UR1 476 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 BPIFCQ8NFQ6 507 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 OR10W1Q8NGF6 305 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 OR4S2Q8NH73 311 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 PECRQ9BY49 303 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 FGF20Q9NP95 211 aaPredicted RBP4.85□□□□□ -1.63
VCAN-206ENST00000505615 BET1LQ9NYM9 111 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 THYN1Q9P016 225 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 XCL2Q9UBD3 114 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 ARL2BPQ9Y2Y0 163 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 PRELID3BQ9Y3B1 194 aa4.85□□□□□ -1.63
VCAN-206ENST00000505615 RBM7Q9Y580 266 aaKnown RBP4.85□□□□□ -1.63
VCAN-206ENST00000505615 TRAV14DV4A0A0A6YYC5 116 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 TRAV3A0A0B4J244 114 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 IGHV3-66A0A0C4DH42 116 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 A0A0U1RRA0 63 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 PCP4L1A6NKN8 68 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 VCYO14598 125 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 YIF1AO95070 293 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 CDK1P06493 297 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 FCGR3AP08637 254 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 CD37P11049 281 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 Q56UQ5 140 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 SPANXN2Q5MJ10 180 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 ZNF773Q6PK81 442 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 PQLC2Q6ZP29 291 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 LRRTM1Q86UE6 522 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 UBAC2Q8NBM4 344 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 ZNF485Q8NCK3 441 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 DUSP18Q8NEJ0 188 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 OR4A16Q8NH70 328 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 RHOXF1Q8NHV9 184 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 MAFIPQ8WZ33 124 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 Q9H3A6 140 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 ZNF446Q9NWS9 450 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 BABAM2Q9NXR7 383 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 RABAC1Q9UI14 185 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 POMPQ9Y244 141 aa4.84□□□□□ -1.63
VCAN-206ENST00000505615 RBMX2Q9Y388 322 aaKnown RBP4.84□□□□□ -1.63
VCAN-206ENST00000505615 F11RQ9Y624 299 aaKnown RBP4.84□□□□□ -1.63
VCAN-206ENST00000505615 A0A087X0K7 114 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 IGKV1D-13A0A0B4J2D9 117 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 SMIM9A6NGZ8 99 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 PRYO14603 147 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 ALPLP05186 524 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 SERPINE2P07093 398 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 OR13C7P0DN81 318 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 IGKV1-13P0DP09 117 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 FGF9P31371 208 aaPredicted RBP4.83□□□□□ -1.64
VCAN-206ENST00000505615 TAS2R43P59537 309 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 SNRPEP62304 92 aaKnown RBP4.83□□□□□ -1.64
VCAN-206ENST00000505615 COTL1Q14019 142 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 TTC32Q5I0X7 151 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 TTC23Q5W5X9 447 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 TMPRSS11AQ6ZMR5 421 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 ERASQ7Z444 233 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 CBR4Q8N4T8 237 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 DCANP1Q8TF63 244 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 APH1BQ8WW43 257 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 RAB40CQ96S21 281 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 GINS4Q9BRT9 223 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms