RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 NUFIP2Q7Z417 695 aaKnown RBP3.33□□□□□ -1.88
RFC1-208ENST00000504849 BAGE3Q86Y29 109 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 BAGE2Q86Y30 109 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 FAM58AQ8N1B3 248 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 FGFRL1Q8N441 504 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 ZNF843Q8N446 348 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 TCTEX1D1Q8N7M0 179 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 TSTD1Q8NFU3 115 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 OR2D3Q8NGH3 330 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 OR1L6Q8NGR2 347 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 OR2AE1Q8NHA4 323 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 IL1F10Q8WWZ1 152 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 OR5P3Q8WZ94 311 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 ZNF501Q96CX3 271 aaPredicted RBP3.33□□□□□ -1.88
RFC1-208ENST00000504849 ALKBH3Q96Q83 286 aaPredicted RBP3.33□□□□□ -1.88
RFC1-208ENST00000504849 OR4C12Q96R67 309 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 OVOL2Q9BRP0 275 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 TMEM204Q9BSN7 226 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 TMEM208Q9BTX3 173 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 OR2H1Q9GZK4 316 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 OR51B6Q9H340 312 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 SLC25A22Q9H936 323 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 PLEKHA3Q9HB20 300 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 PATZ1Q9HBE1 687 aaKnown RBP3.33□□□□□ -1.88
RFC1-208ENST00000504849 TMEM106BQ9NUM4 274 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 UQCR10Q9UDW1 63 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 RARRES3Q9UL19 164 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 PXMP4Q9Y6I8 212 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 PRRC2BQ5JSZ5 2229 aaKnown RBP3.33□□□□□ -1.88
RFC1-208ENST00000504849 SMG1Q96Q15 3661 aaKnown RBP3.33□□□□□ -1.88
RFC1-208ENST00000504849 TEX15Q9BXT5 2789 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 CPAMD8Q8IZJ3 1885 aa3.33□□□□□ -1.88
RFC1-208ENST00000504849 TICRRQ7Z2Z1 1910 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 NUMA1Q14980 2115 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 IGKV1D-13A0A0B4J2D9 117 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 C20orf202A1L168 122 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 C5orf63A6NC05 138 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 OR5B21A6NL26 309 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 C16orf97H3BN30 126 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 SCRG1O75711 98 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 MMP7P09237 267 aaPredicted RBP3.32□□□□□ -1.88
RFC1-208ENST00000504849 IGKV1-13P0DP09 117 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 CRISP2P16562 243 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 GZMHP20718 246 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 BCL3P20749 454 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 CD82P27701 267 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 ID1P41134 155 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 SSR4P51571 173 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 HNRNPA3P51991 378 aaKnown RBP3.32□□□□□ -1.88
RFC1-208ENST00000504849 CLDN18P56856 261 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 YPEL3P61236 119 aaPredicted RBP3.32□□□□□ -1.88
RFC1-208ENST00000504849 SELENOTP62341 195 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 PSG4Q00888 419 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 PLGLB1Q02325 96 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 ZNF90Q03938 601 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 Q0VG73 95 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 BATFQ16520 125 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 RSPO1Q2MKA7 263 aaPredicted RBP3.32□□□□□ -1.88
RFC1-208ENST00000504849 CEACAM21Q3KPI0 293 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 DMRTC1Q5HYR2 192 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 ZNF324BQ6AW86 544 aaPredicted RBP3.32□□□□□ -1.88
RFC1-208ENST00000504849 OR8G2PQ6IF36 304 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 C16orf47Q6ZP98 133 aaPredicted RBP3.32□□□□□ -1.88
RFC1-208ENST00000504849 SHISA6Q6ZSJ9 500 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 TMEM144Q7Z5S9 345 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 LINC01551Q86U37 167 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 RPS19BP1Q86WX3 136 aaKnown RBP3.32□□□□□ -1.88
RFC1-208ENST00000504849 Q8IYB0 196 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 C17orf78Q8N4C9 275 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 SIGLECL1Q8N7X8 197 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 OR5A2Q8NGI9 324 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 SGMS2Q8NHU3 365 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 ORAOV1Q8WV07 137 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 APOBEC3DQ96AK3 386 aaPredicted RBP3.32□□□□□ -1.88
RFC1-208ENST00000504849 TIMD4Q96H15 378 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 SFRP2Q96HF1 295 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 FAM218AQ96MZ4 157 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 RCHY1Q96PM5 261 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 RNF2Q99496 336 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 FAM173AQ9BQD7 235 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 OR2J1Q9GZK6 312 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 OPN3Q9H1Y3 402 aaPredicted RBP3.32□□□□□ -1.88
RFC1-208ENST00000504849 GAL3ST2Q9H3Q3 398 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 VSIRQ9H7M9 311 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 TUBG2Q9NRH3 451 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.32□□□□□ -1.88
RFC1-208ENST00000504849 KCNIP1Q9NZI2 227 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 MTCH1Q9NZJ7 389 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 ZFP30Q9Y2G7 519 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 MRPS18CQ9Y3D5 142 aaKnown RBP3.32□□□□□ -1.88
RFC1-208ENST00000504849 MPC1Q9Y5U8 109 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 RFNGQ9Y644 331 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 LY96Q9Y6Y9 160 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 COL5A1P20908 1838 aaPredicted RBP3.32□□□□□ -1.88
RFC1-208ENST00000504849 KMT2EQ8IZD2 1858 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 SCN3AQ9NY46 2000 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 MYO10Q9HD67 2058 aa3.32□□□□□ -1.88
RFC1-208ENST00000504849 CNOT1A5YKK6 2376 aaKnown RBP3.32□□□□□ -1.88
RFC1-208ENST00000504849 KALRNO60229 2985 aa3.31□□□□□ -1.88
RFC1-208ENST00000504849 TENM4Q6N022 2769 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms