RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 VN1R17PQ8TDU5 208 aa7.74□□□□□ -1.17
NUP54-203ENST00000504173 TMEM170AQ8WVE7 144 aa7.74□□□□□ -1.17
NUP54-203ENST00000504173 DPF1Q92782 380 aa7.74□□□□□ -1.17
NUP54-203ENST00000504173 RAX2Q96IS3 184 aa7.74□□□□□ -1.17
NUP54-203ENST00000504173 SMIM8Q96KF7 97 aa7.74□□□□□ -1.17
NUP54-203ENST00000504173 DUX3Q96PT4 197 aa7.74□□□□□ -1.17
NUP54-203ENST00000504173 C21orf62Q9NYP8 219 aa7.74□□□□□ -1.17
NUP54-203ENST00000504173 PSENENQ9NZ42 101 aa7.74□□□□□ -1.17
NUP54-203ENST00000504173 STRAPQ9Y3F4 350 aaKnown RBP7.74□□□□□ -1.17
NUP54-203ENST00000504173 IGHV4OR15-8A0A075B7B6 117 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 A0A087WW49 117 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.73□□□□□ -1.17
NUP54-203ENST00000504173 TRBV7-1A0A0A6YYK4 115 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 RPS10-NUDT3A0A1W2PQS6 291 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 C15orf62A8K5M9 175 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 I3L2K1 104 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 HSPB1P04792 205 aaKnown RBP7.73□□□□□ -1.17
NUP54-203ENST00000504173 CXCL3P19876 107 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 MYCNOSP40205 109 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 ZNF616Q08AN1 781 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 IL15RAQ13261 267 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 LRRC37A5PQ49AS3 106 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 ACSM6Q6P461 480 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 CLEC19AQ6UXS0 136 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 ETV3LQ6ZN32 361 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 UBAC2Q8NBM4 344 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 ZNF502Q8TBZ5 544 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 SCARB1Q8WTV0 552 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 CCDC140Q96MF4 163 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 OR4C12Q96R67 309 aa7.73□□□□□ -1.17
NUP54-203ENST00000504173 RANGRFQ9HD47 186 aaPredicted RBP7.73□□□□□ -1.17
NUP54-203ENST00000504173 PEF1Q9UBV8 284 aaKnown RBP7.73□□□□□ -1.17
NUP54-203ENST00000504173 LINC01619G3V211 115 aa7.72□□□□□ -1.17
NUP54-203ENST00000504173 TSC22D2O75157 780 aa7.72□□□□□ -1.17
NUP54-203ENST00000504173 TMEM50AO95807 157 aa7.72□□□□□ -1.17
NUP54-203ENST00000504173 TRBV12-3P01733 135 aa7.72□□□□□ -1.17
NUP54-203ENST00000504173 IGHV3-48P01763 117 aa7.72□□□□□ -1.17
NUP54-203ENST00000504173 RLN2P04090 185 aa7.72□□□□□ -1.17
NUP54-203ENST00000504173 GPR183P32249 361 aa7.72□□□□□ -1.17
NUP54-203ENST00000504173 BCAP31P51572 246 aa7.72□□□□□ -1.17
NUP54-203ENST00000504173 MFAP4P55083 255 aa7.72□□□□□ -1.17
NUP54-203ENST00000504173 PAX9P55771 341 aa7.72□□□□□ -1.17
NUP54-203ENST00000504173 TAS2R30P59541 319 aa7.72□□□□□ -1.17
NUP54-203ENST00000504173 Q56UQ5 140 aa7.72□□□□□ -1.17
NUP54-203ENST00000504173 ETFRF1Q6IPR1 90 aa7.72□□□□□ -1.17
NUP54-203ENST00000504173 PPP1R1CQ8WVI7 109 aa7.72□□□□□ -1.17
NUP54-203ENST00000504173 WDR89Q96FK6 387 aaPredicted RBP7.72□□□□□ -1.17
NUP54-203ENST00000504173 FNDC4Q9H6D8 234 aaPredicted RBP7.72□□□□□ -1.17
NUP54-203ENST00000504173 GAR1Q9NY12 217 aaKnown RBP7.72□□□□□ -1.17
NUP54-203ENST00000504173 OR2T8A6NH00 312 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 PPP5D1E7EU14 171 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 BMPR1BO00238 502 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 TGOLN2O43493 480 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 DEDDO75618 318 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 CLEC3BP05452 202 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 METTL15P1P0C7V9 234 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 PET100P0DJ07 73 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 SLC25A4P12235 298 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 ZP3P21754 424 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 ARL3P36405 182 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 NPBWR1P48145 328 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 CAV2P51636 162 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 SLURP1P55000 103 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 CD69Q07108 199 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 FHL3Q13643 280 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 MLANAQ16655 118 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 Q6ZNX1 250 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 SLC16A13Q7RTY0 426 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 SLC35E1Q96K37 410 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 ATP6V0BQ99437 205 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 TXN2Q99757 166 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 ZNF436Q9C0F3 470 aaPredicted RBP7.71□□□□□ -1.18
NUP54-203ENST00000504173 C11orf1Q9H5F2 150 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 ZC4H2Q9NQZ6 224 aa7.71□□□□□ -1.18
NUP54-203ENST00000504173 FAM24AA6NFZ4 105 aa7.7□□□□□ -1.18
NUP54-203ENST00000504173 E5RGE8 158 aa7.7□□□□□ -1.18
NUP54-203ENST00000504173 F8W735 103 aaPredicted RBP7.7□□□□□ -1.18
NUP54-203ENST00000504173 NUPL2O15504 423 aaKnown RBP7.7□□□□□ -1.18
NUP54-203ENST00000504173 GNG7O60262 68 aa7.7□□□□□ -1.18
NUP54-203ENST00000504173 GGCTO75223 188 aaKnown RBP7.7□□□□□ -1.18
NUP54-203ENST00000504173 MPC2O95563 127 aa7.7□□□□□ -1.18
NUP54-203ENST00000504173 GIPP09681 153 aaPredicted RBP7.7□□□□□ -1.18
NUP54-203ENST00000504173 HOXD3P31249 432 aaPredicted RBP7.7□□□□□ -1.18
NUP54-203ENST00000504173 FCGR2BP31994 310 aaPredicted RBP7.7□□□□□ -1.18
NUP54-203ENST00000504173 GPX4P36969 197 aaPredicted RBP7.7□□□□□ -1.18
NUP54-203ENST00000504173 RND2P52198 227 aa7.7□□□□□ -1.18
NUP54-203ENST00000504173 RAP2BP61225 183 aa7.7□□□□□ -1.18
NUP54-203ENST00000504173 RPEL1Q2QD12 228 aa7.7□□□□□ -1.18
NUP54-203ENST00000504173 OR8G2PQ6IF36 304 aa7.7□□□□□ -1.18
NUP54-203ENST00000504173 TMEM14EPQ6UXP3 125 aa7.7□□□□□ -1.18
NUP54-203ENST00000504173 ASB13Q8WXK3 278 aa7.7□□□□□ -1.18
NUP54-203ENST00000504173 BSCL2Q96G97 398 aaPredicted RBP7.7□□□□□ -1.18
NUP54-203ENST00000504173 ACY3Q96HD9 319 aa7.7□□□□□ -1.18
NUP54-203ENST00000504173 LYRM2Q9NU23 88 aaPredicted RBP7.7□□□□□ -1.18
NUP54-203ENST00000504173 OR5AC2Q9NZP5 309 aa7.7□□□□□ -1.18
NUP54-203ENST00000504173 H0YIZ8 118 aa7.69□□□□□ -1.18
NUP54-203ENST00000504173 C3orf84H3BNL1 204 aa7.69□□□□□ -1.18
NUP54-203ENST00000504173 CLN5O75503 358 aa7.69□□□□□ -1.18
NUP54-203ENST00000504173 SCGB2A1O75556 95 aa7.69□□□□□ -1.18
NUP54-203ENST00000504173 CCNKO75909 580 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms